data_3DT3 # _model_server_result.job_id mabIxAVLYAS5O7lns4OIsg _model_server_result.datetime_utc '2025-03-20 23:10:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3dt3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1}' # _entry.id 3DT3 # _exptl.entry_id 3DT3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details 'Medicinal Chemistry' _entity.formula_weight 358.387 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-(4-hydroxyphenoxy)-6-(3-hydroxyphenyl)-7-methylnaphthalen-2-ol _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.15 _cell.angle_gamma 90 _cell.entry_id 3DT3 _cell.length_a 103.309 _cell.length_b 57.996 _cell.length_c 88.331 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3DT3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C23 H18 O4' _chem_comp.formula_weight 358.387 _chem_comp.id 369 _chem_comp.mon_nstd_flag . _chem_comp.name 5-(4-hydroxyphenoxy)-6-(3-hydroxyphenyl)-7-methylnaphthalen-2-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C10 C9 369 doub 1 n y C10 O2 369 sing 2 n n C10 C17 369 sing 3 n y C12 C13 369 doub 4 n y C12 C11 369 sing 5 n y C13 C14 369 sing 6 n y C15 C14 369 doub 7 n y C15 C16 369 sing 8 n y C19 C18 369 doub 9 n y C19 C20 369 sing 10 n y C21 C22 369 sing 11 n y C21 C20 369 doub 12 n y C22 C23 369 doub 13 n y C22 O4 369 sing 14 n n C23 C18 369 sing 15 n y C1 C2 369 sing 16 n n C2 C3 369 sing 17 n y C2 C17 369 doub 18 n y C3 C4 369 doub 19 n y C4 C5 369 sing 20 n y C4 C9 369 sing 21 n y C5 C6 369 doub 22 n y C6 O1 369 sing 23 n n C6 C7 369 sing 24 n y C7 C8 369 doub 25 n y C8 C9 369 sing 26 n y O2 C11 369 sing 27 n n C11 C16 369 doub 28 n y C14 O3 369 sing 29 n n C17 C18 369 sing 30 n y C12 H12 369 sing 31 n n C13 H13 369 sing 32 n n C15 H15 369 sing 33 n n C19 H19 369 sing 34 n n C21 H21 369 sing 35 n n C23 H23 369 sing 36 n n C1 H1 369 sing 37 n n C1 H1A 369 sing 38 n n C1 H1B 369 sing 39 n n C3 H3 369 sing 40 n n C5 H5 369 sing 41 n n O1 HO1 369 sing 42 n n C7 H7 369 sing 43 n n C8 H8 369 sing 44 n n O3 HO3 369 sing 45 n n C16 H16 369 sing 46 n n C20 H20 369 sing 47 n n O4 HO4 369 sing 48 n n # _atom_sites.entry_id 3DT3 _atom_sites.fract_transf_matrix[1][1] 0.00968 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002622 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017243 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011729 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 369 A 1 1 1 369 369 . D 2 369 B 1 2 2 369 369 . E 3 HOH A 1 54 54 HOH HOH . E 3 HOH A 2 552 1 HOH HOH . E 3 HOH A 3 553 2 HOH HOH . E 3 HOH A 4 554 3 HOH HOH . E 3 HOH A 5 555 5 HOH HOH . E 3 HOH A 6 556 7 HOH HOH . E 3 HOH A 7 557 8 HOH HOH . E 3 HOH A 8 558 9 HOH HOH . E 3 HOH A 9 559 10 HOH HOH . E 3 HOH A 10 560 11 HOH HOH . E 3 HOH A 11 561 12 HOH HOH . E 3 HOH A 12 562 13 HOH HOH . E 3 HOH A 13 563 14 HOH HOH . E 3 HOH A 14 564 15 HOH HOH . E 3 HOH A 15 565 16 HOH HOH . E 3 HOH A 16 566 17 HOH HOH . E 3 HOH A 17 567 18 HOH HOH . E 3 HOH A 18 568 19 HOH HOH . E 3 HOH A 19 569 20 HOH HOH . E 3 HOH A 20 570 21 HOH HOH . E 3 HOH A 21 571 22 HOH HOH . E 3 HOH A 22 572 23 HOH HOH . E 3 HOH A 23 573 25 HOH HOH . E 3 HOH A 24 574 26 HOH HOH . E 3 HOH A 25 575 27 HOH HOH . E 3 HOH A 26 576 28 HOH HOH . E 3 HOH A 27 579 33 HOH HOH . E 3 HOH A 28 580 34 HOH HOH . E 3 HOH A 29 581 35 HOH HOH . E 3 HOH A 30 582 37 HOH HOH . E 3 HOH A 31 583 39 HOH HOH . E 3 HOH A 32 584 40 HOH HOH . E 3 HOH A 33 585 41 HOH HOH . E 3 HOH A 34 586 64 HOH HOH . E 3 HOH A 35 588 68 HOH HOH . E 3 HOH A 36 589 70 HOH HOH . E 3 HOH A 37 590 71 HOH HOH . E 3 HOH A 38 591 72 HOH HOH . E 3 HOH A 39 592 73 HOH HOH . E 3 HOH A 40 593 80 HOH HOH . E 3 HOH A 41 594 82 HOH HOH . E 3 HOH A 42 595 87 HOH HOH . E 3 HOH A 43 596 92 HOH HOH . E 3 HOH A 44 597 93 HOH HOH . E 3 HOH A 45 598 94 HOH HOH . E 3 HOH A 46 599 95 HOH HOH . E 3 HOH A 47 600 96 HOH HOH . E 3 HOH A 48 601 99 HOH HOH . E 3 HOH A 49 602 103 HOH HOH . E 3 HOH A 50 603 107 HOH HOH . E 3 HOH A 51 604 111 HOH HOH . E 3 HOH A 52 605 115 HOH HOH . E 3 HOH A 53 606 116 HOH HOH . E 3 HOH A 54 607 117 HOH HOH . F 3 HOH B 1 36 36 HOH HOH . F 3 HOH B 2 43 43 HOH HOH . F 3 HOH B 3 44 44 HOH HOH . F 3 HOH B 4 45 45 HOH HOH . F 3 HOH B 5 46 46 HOH HOH . F 3 HOH B 6 47 47 HOH HOH . F 3 HOH B 7 48 48 HOH HOH . F 3 HOH B 8 50 50 HOH HOH . F 3 HOH B 9 51 51 HOH HOH . F 3 HOH B 10 55 55 HOH HOH . F 3 HOH B 11 56 56 HOH HOH . F 3 HOH B 12 57 57 HOH HOH . F 3 HOH B 13 58 58 HOH HOH . F 3 HOH B 14 60 60 HOH HOH . F 3 HOH B 15 61 61 HOH HOH . F 3 HOH B 16 62 62 HOH HOH . F 3 HOH B 17 63 63 HOH HOH . F 3 HOH B 18 65 65 HOH HOH . F 3 HOH B 19 66 66 HOH HOH . F 3 HOH B 20 69 69 HOH HOH . F 3 HOH B 21 74 74 HOH HOH . F 3 HOH B 22 76 76 HOH HOH . F 3 HOH B 23 77 77 HOH HOH . F 3 HOH B 24 78 78 HOH HOH . F 3 HOH B 25 81 81 HOH HOH . F 3 HOH B 26 85 85 HOH HOH . F 3 HOH B 27 86 86 HOH HOH . F 3 HOH B 28 88 88 HOH HOH . F 3 HOH B 29 97 97 HOH HOH . F 3 HOH B 30 98 98 HOH HOH . F 3 HOH B 31 100 100 HOH HOH . F 3 HOH B 32 102 102 HOH HOH . F 3 HOH B 33 106 106 HOH HOH . F 3 HOH B 34 108 108 HOH HOH . F 3 HOH B 35 109 109 HOH HOH . F 3 HOH B 36 110 110 HOH HOH . F 3 HOH B 37 112 112 HOH HOH . F 3 HOH B 38 113 113 HOH HOH . F 3 HOH B 39 114 114 HOH HOH . F 3 HOH B 40 118 118 HOH HOH . F 3 HOH B 41 119 119 HOH HOH . F 3 HOH B 42 120 120 HOH HOH . F 3 HOH B 43 121 121 HOH HOH . F 3 HOH B 44 577 30 HOH HOH . F 3 HOH B 45 578 31 HOH HOH . F 3 HOH B 46 587 67 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 369 . . . C 2 42.249 -1.772 15.969 1 39.31 ? C10 369 1 A 1 HETATM 2 C C12 369 . . . C 2 42.845 -2.321 18.664 1 38.64 ? C12 369 1 A 1 HETATM 3 C C13 369 . . . C 2 43.105 -2.739 19.951 1 38.47 ? C13 369 1 A 1 HETATM 4 C C15 369 . . . C 2 44.641 -4.373 19.133 1 37.27 ? C15 369 1 A 1 HETATM 5 C C19 369 . . . C 2 41.906 -4.32 14.388 1 40.92 ? C19 369 1 A 1 HETATM 6 C C21 369 . . . C 2 41.1 -6.516 14.735 1 42 ? C21 369 1 A 1 HETATM 7 C C22 369 . . . C 2 40.231 -6.009 15.671 1 42.01 ? C22 369 1 A 1 HETATM 8 C C23 369 . . . C 2 40.181 -4.666 15.981 1 40.97 ? C23 369 1 A 1 HETATM 9 C C1 369 . . . C 2 38.736 -2.154 14.718 1 37.96 ? C1 369 1 A 1 HETATM 10 C C2 369 . . . C 2 40.017 -1.569 15.207 1 38.72 ? C2 369 1 A 1 HETATM 11 C C3 369 . . . C 2 40.112 -0.205 15.336 1 39.11 ? C3 369 1 A 1 HETATM 12 C C4 369 . . . C 2 41.282 0.386 15.761 1 39.44 ? C4 369 1 A 1 HETATM 13 C C5 369 . . . C 2 41.358 1.755 15.869 1 39.63 ? C5 369 1 A 1 HETATM 14 C C6 369 . . . C 2 42.527 2.337 16.302 1 39.63 ? C6 369 1 A 1 HETATM 15 O O1 369 . . . C 2 42.591 3.713 16.405 1 39.86 ? O1 369 1 A 1 HETATM 16 C C7 369 . . . C 2 43.621 1.575 16.629 1 38.71 ? C7 369 1 A 1 HETATM 17 C C8 369 . . . C 2 43.535 0.206 16.517 1 39.59 ? C8 369 1 A 1 HETATM 18 C C9 369 . . . C 2 42.368 -0.397 16.084 1 40.11 ? C9 369 1 A 1 HETATM 19 O O2 369 . . . C 2 43.308 -2.598 16.283 1 38.44 ? O2 369 1 A 1 HETATM 20 C C11 369 . . . C 2 43.488 -2.942 17.613 1 38.07 ? C11 369 1 A 1 HETATM 21 C C14 369 . . . C 2 44.001 -3.757 20.18 1 38.19 ? C14 369 1 A 1 HETATM 22 O O3 369 . . . C 2 44.256 -4.163 21.48 1 38.34 ? O3 369 1 A 1 HETATM 23 C C16 369 . . . C 2 44.38 -3.961 17.849 1 37.45 ? C16 369 1 A 1 HETATM 24 C C17 369 . . . C 2 41.091 -2.374 15.528 1 39.21 ? C17 369 1 A 1 HETATM 25 C C18 369 . . . C 2 41.039 -3.806 15.329 1 40.46 ? C18 369 1 A 1 HETATM 26 C C20 369 . . . C 2 41.949 -5.659 14.086 1 41.29 ? C20 369 1 A 1 HETATM 27 O O4 369 . . . C 2 39.403 -6.913 16.291 1 43.55 ? O4 369 1 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 347 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 27 #