data_3DTS # _model_server_result.job_id Z0tHBdykuUTvUJSuqMbMQw _model_server_result.datetime_utc '2025-04-08 21:03:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3dts # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":709}' # _entry.id 3DTS # _exptl.entry_id 3DTS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 229.402 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'LAURYL DIMETHYLAMINE-N-OXIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3DTS _cell.length_a 141.3 _cell.length_b 141.3 _cell.length_c 187.6 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3DTS _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 G N N ? 6 P N N ? 6 Q N N ? 6 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 173 L HIS 173 1_555 D MG BCL . L BCL 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc2 A NE2 HIS 190 L HIS 190 1_555 L FE FE . M FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc3 A NE2 HIS 230 L HIS 230 1_555 L FE FE . M FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc4 B NE2 HIS 182 M HIS 182 1_555 I MG BCL . M BCL 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? metalc ? metalc5 B NE2 HIS 202 M HIS 202 1_555 K MG BCL . M BCL 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? metalc ? metalc6 B NE2 HIS 219 M HIS 219 1_555 L FE FE . M FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc7 B OE1 GLU 234 M GLU 234 1_555 L FE FE . M FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc8 B OE2 GLU 234 M GLU 234 1_555 L FE FE . M FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? metalc ? metalc9 B NE2 HIS 266 M HIS 266 1_555 L FE FE . M FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? # _chem_comp.formula 'C14 H31 N O' _chem_comp.formula_weight 229.402 _chem_comp.id LDA _chem_comp.mon_nstd_flag . _chem_comp.name 'LAURYL DIMETHYLAMINE-N-OXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 O1 LDA sing 722 n n N1 CM1 LDA sing 723 n n N1 CM2 LDA sing 724 n n N1 C1 LDA sing 725 n n CM1 HM11 LDA sing 726 n n CM1 HM12 LDA sing 727 n n CM1 HM13 LDA sing 728 n n CM2 HM21 LDA sing 729 n n CM2 HM22 LDA sing 730 n n CM2 HM23 LDA sing 731 n n C1 C2 LDA sing 732 n n C1 H11 LDA sing 733 n n C1 H12 LDA sing 734 n n C2 C3 LDA sing 735 n n C2 H21 LDA sing 736 n n C2 H22 LDA sing 737 n n C3 C4 LDA sing 738 n n C3 H31 LDA sing 739 n n C3 H32 LDA sing 740 n n C4 C5 LDA sing 741 n n C4 H41 LDA sing 742 n n C4 H42 LDA sing 743 n n C5 C6 LDA sing 744 n n C5 H51 LDA sing 745 n n C5 H52 LDA sing 746 n n C6 C7 LDA sing 747 n n C6 H61 LDA sing 748 n n C6 H62 LDA sing 749 n n C7 C8 LDA sing 750 n n C7 H71 LDA sing 751 n n C7 H72 LDA sing 752 n n C8 C9 LDA sing 753 n n C8 H81 LDA sing 754 n n C8 H82 LDA sing 755 n n C9 C10 LDA sing 756 n n C9 H91 LDA sing 757 n n C9 H92 LDA sing 758 n n C10 C11 LDA sing 759 n n C10 H101 LDA sing 760 n n C10 H102 LDA sing 761 n n C11 C12 LDA sing 762 n n C11 H111 LDA sing 763 n n C11 H112 LDA sing 764 n n C12 H121 LDA sing 765 n n C12 H122 LDA sing 766 n n C12 H123 LDA sing 767 n n # _atom_sites.entry_id 3DTS _atom_sites.fract_transf_matrix[1][1] 0.007077 _atom_sites.fract_transf_matrix[1][2] 0.004086 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008172 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00533 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 BCL L 1 502 502 BCL BCL . E 4 BCL L 1 501 501 BCL BCL . F 5 U10 L 1 504 504 U10 U10 . G 6 LDA L 1 709 709 LDA LDA . H 7 BPH M 1 503 503 BPH BPH . I 4 BCL M 1 501 501 BCL BCL . J 7 BPH M 1 504 504 BPH BPH . K 4 BCL M 1 502 502 BCL BCL . L 8 FE M 1 500 500 FE FE . M 5 U10 M 1 505 505 U10 U10 . N 9 SPN M 1 600 600 SPN SPN . O 10 CDL M 1 800 800 CDL CDL . P 6 LDA M 1 701 701 LDA LDA . Q 6 LDA M 1 704 704 LDA LDA . R 6 LDA H 1 703 703 LDA LDA . S 11 HOH L 1 1001 1001 HOH HOH . S 11 HOH L 2 1002 1002 HOH HOH . S 11 HOH L 3 1003 1003 HOH HOH . S 11 HOH L 4 1004 1004 HOH HOH . S 11 HOH L 5 1005 1005 HOH HOH . S 11 HOH L 6 1006 1006 HOH HOH . S 11 HOH L 7 1007 1007 HOH HOH . S 11 HOH L 8 1008 1008 HOH HOH . S 11 HOH L 9 1009 1009 HOH HOH . S 11 HOH L 10 1010 1010 HOH HOH . S 11 HOH L 11 1011 1011 HOH HOH . S 11 HOH L 12 1012 1012 HOH HOH . S 11 HOH L 13 1013 1013 HOH HOH . S 11 HOH L 14 1014 1014 HOH HOH . S 11 HOH L 15 1015 1015 HOH HOH . S 11 HOH L 16 1016 1016 HOH HOH . S 11 HOH L 17 1017 1017 HOH HOH . S 11 HOH L 18 1018 1018 HOH HOH . S 11 HOH L 19 1019 1019 HOH HOH . S 11 HOH L 20 1020 1020 HOH HOH . S 11 HOH L 21 1021 1021 HOH HOH . S 11 HOH L 22 1022 1022 HOH HOH . S 11 HOH L 23 1023 1023 HOH HOH . S 11 HOH L 24 1024 1024 HOH HOH . S 11 HOH L 25 1025 1025 HOH HOH . S 11 HOH L 26 1026 1026 HOH HOH . S 11 HOH L 27 1027 1027 HOH HOH . S 11 HOH L 28 1028 1028 HOH HOH . T 11 HOH M 1 1029 1029 HOH HOH . T 11 HOH M 2 1030 1030 HOH HOH . T 11 HOH M 3 1031 1031 HOH HOH . T 11 HOH M 4 1032 1032 HOH HOH . T 11 HOH M 5 1033 1033 HOH HOH . T 11 HOH M 6 1034 1034 HOH HOH . T 11 HOH M 7 1035 1035 HOH HOH . T 11 HOH M 8 1036 1036 HOH HOH . T 11 HOH M 9 1037 1037 HOH HOH . T 11 HOH M 10 1038 1038 HOH HOH . T 11 HOH M 11 1039 1039 HOH HOH . T 11 HOH M 12 1040 1040 HOH HOH . T 11 HOH M 13 1041 1041 HOH HOH . T 11 HOH M 14 1042 1042 HOH HOH . T 11 HOH M 15 1043 1043 HOH HOH . T 11 HOH M 16 1044 1044 HOH HOH . T 11 HOH M 17 1045 1045 HOH HOH . T 11 HOH M 18 1046 1046 HOH HOH . T 11 HOH M 19 1047 1047 HOH HOH . T 11 HOH M 20 1048 1048 HOH HOH . T 11 HOH M 21 1049 1049 HOH HOH . T 11 HOH M 22 1050 1050 HOH HOH . T 11 HOH M 23 1051 1051 HOH HOH . T 11 HOH M 24 1052 1052 HOH HOH . T 11 HOH M 25 1053 1053 HOH HOH . T 11 HOH M 26 1054 1054 HOH HOH . T 11 HOH M 27 1055 1055 HOH HOH . U 11 HOH H 1 1056 1056 HOH HOH . U 11 HOH H 2 1057 1057 HOH HOH . U 11 HOH H 3 1058 1058 HOH HOH . U 11 HOH H 4 1059 1059 HOH HOH . U 11 HOH H 5 1060 1060 HOH HOH . U 11 HOH H 6 1061 1061 HOH HOH . U 11 HOH H 7 1062 1062 HOH HOH . U 11 HOH H 8 1063 1063 HOH HOH . U 11 HOH H 9 1064 1064 HOH HOH . U 11 HOH H 10 1065 1065 HOH HOH . U 11 HOH H 11 1066 1066 HOH HOH . U 11 HOH H 12 1067 1067 HOH HOH . U 11 HOH H 13 1068 1068 HOH HOH . U 11 HOH H 14 1069 1069 HOH HOH . U 11 HOH H 15 1070 1070 HOH HOH . U 11 HOH H 16 1071 1071 HOH HOH . U 11 HOH H 17 1072 1072 HOH HOH . U 11 HOH H 18 1073 1073 HOH HOH . U 11 HOH H 19 1074 1074 HOH HOH . U 11 HOH H 20 1075 1075 HOH HOH . U 11 HOH H 21 1076 1076 HOH HOH . U 11 HOH H 22 1077 1077 HOH HOH . U 11 HOH H 23 1078 1078 HOH HOH . U 11 HOH H 24 1079 1079 HOH HOH . U 11 HOH H 25 1080 1080 HOH HOH . U 11 HOH H 26 1081 1081 HOH HOH . U 11 HOH H 27 1082 1082 HOH HOH . U 11 HOH H 28 1083 1083 HOH HOH . U 11 HOH H 29 1084 1084 HOH HOH . U 11 HOH H 30 1085 1085 HOH HOH . U 11 HOH H 31 1086 1086 HOH HOH . U 11 HOH H 32 1087 1087 HOH HOH . U 11 HOH H 33 1088 1088 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 LDA . . . G 6 -11.455 89.365 40.687 1 119.39 ? N1 LDA 709 L 1 HETATM 2 O O1 LDA . . . G 6 -10.962 88.271 40.93 1 120.49 ? O1 LDA 709 L 1 HETATM 3 C CM1 LDA . . . G 6 -12.891 89.352 40.988 1 117.58 ? CM1 LDA 709 L 1 HETATM 4 C CM2 LDA . . . G 6 -10.84 90.38 41.532 1 118.04 ? CM2 LDA 709 L 1 HETATM 5 C C1 LDA . . . G 6 -11.245 89.718 39.253 1 117.56 ? C1 LDA 709 L 1 HETATM 6 C C2 LDA . . . G 6 -10.167 89.629 38.167 1 113.59 ? C2 LDA 709 L 1 HETATM 7 C C3 LDA . . . G 6 -8.763 89.525 38.762 1 111.06 ? C3 LDA 709 L 1 HETATM 8 C C4 LDA . . . G 6 -7.782 88.933 37.77 1 110.01 ? C4 LDA 709 L 1 HETATM 9 C C5 LDA . . . G 6 -6.545 89.792 37.625 1 109.4 ? C5 LDA 709 L 1 HETATM 10 C C6 LDA . . . G 6 -5.734 89.345 36.425 1 108.04 ? C6 LDA 709 L 1 HETATM 11 C C7 LDA . . . G 6 -4.247 89.631 36.635 1 108.4 ? C7 LDA 709 L 1 HETATM 12 C C8 LDA . . . G 6 -3.341 88.79 35.723 1 109.16 ? C8 LDA 709 L 1 HETATM 13 C C9 LDA . . . G 6 -4.062 87.519 35.264 1 109.91 ? C9 LDA 709 L 1 HETATM 14 C C10 LDA . . . G 6 -3.082 86.432 34.816 1 108.82 ? C10 LDA 709 L 1 HETATM 15 C C11 LDA . . . G 6 -3.763 85.056 34.668 1 108.7 ? C11 LDA 709 L 1 HETATM 16 C C12 LDA . . . G 6 -2.841 84.032 33.973 1 104.38 ? C12 LDA 709 L 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 249 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 16 #