data_3DUI # _model_server_result.job_id kuOP2pbZu2Zawbiub-91zQ _model_server_result.datetime_utc '2024-12-21 18:38:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3dui # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":200}' # _entry.id 3DUI # _exptl.entry_id 3DUI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-MERCAPTOETHANOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3DUI _cell.length_a 71.59 _cell.length_b 107.64 _cell.length_c 35.83 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3DUI _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 8 A CYS 7 1_555 B SG CYS 8 B CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? covale ? covale1 A SG CYS 62 A CYS 61 1_555 C S2 BME . A BME 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.921 ? covale ? covale2 B SG CYS 62 B CYS 61 1_555 D S2 BME . B BME 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.923 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id BME _chem_comp.mon_nstd_flag . _chem_comp.name BETA-MERCAPTOETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BME sing 70 n n C1 O1 BME sing 71 n n C1 H11 BME sing 72 n n C1 H12 BME sing 73 n n C2 S2 BME sing 74 n n C2 H21 BME sing 75 n n C2 H22 BME sing 76 n n O1 HO1 BME sing 77 n n S2 HS2 BME sing 78 n n # _atom_sites.entry_id 3DUI _atom_sites.fract_transf_matrix[1][1] 0.013968 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00929 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02791 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BME A 1 200 200 BME BME . D 2 BME B 1 200 200 BME BME . E 3 HOH A 1 201 1 HOH WAT . E 3 HOH A 2 202 3 HOH WAT . E 3 HOH A 3 203 9 HOH WAT . E 3 HOH A 4 204 11 HOH WAT . E 3 HOH A 5 205 12 HOH WAT . E 3 HOH A 6 206 13 HOH WAT . E 3 HOH A 7 207 16 HOH WAT . E 3 HOH A 8 208 24 HOH WAT . E 3 HOH A 9 209 25 HOH WAT . E 3 HOH A 10 210 26 HOH WAT . E 3 HOH A 11 211 27 HOH WAT . E 3 HOH A 12 213 31 HOH WAT . E 3 HOH A 13 214 32 HOH WAT . E 3 HOH A 14 215 33 HOH WAT . E 3 HOH A 15 216 34 HOH WAT . E 3 HOH A 16 217 36 HOH WAT . E 3 HOH A 17 218 37 HOH WAT . E 3 HOH A 18 219 38 HOH WAT . E 3 HOH A 19 220 40 HOH WAT . E 3 HOH A 20 221 41 HOH WAT . E 3 HOH A 21 222 42 HOH WAT . E 3 HOH A 22 223 45 HOH WAT . E 3 HOH A 23 224 47 HOH WAT . E 3 HOH A 24 225 48 HOH WAT . E 3 HOH A 25 226 49 HOH WAT . E 3 HOH A 26 227 50 HOH WAT . E 3 HOH A 27 228 51 HOH WAT . E 3 HOH A 28 229 55 HOH WAT . E 3 HOH A 29 230 56 HOH WAT . E 3 HOH A 30 231 58 HOH WAT . E 3 HOH A 31 232 60 HOH WAT . E 3 HOH A 32 233 61 HOH WAT . E 3 HOH A 33 234 64 HOH WAT . E 3 HOH A 34 235 65 HOH WAT . E 3 HOH A 35 236 67 HOH WAT . E 3 HOH A 36 237 69 HOH WAT . E 3 HOH A 37 238 71 HOH WAT . E 3 HOH A 38 239 73 HOH WAT . E 3 HOH A 39 240 75 HOH WAT . E 3 HOH A 40 241 76 HOH WAT . E 3 HOH A 41 242 78 HOH WAT . E 3 HOH A 42 243 80 HOH WAT . E 3 HOH A 43 244 83 HOH WAT . E 3 HOH A 44 245 85 HOH WAT . E 3 HOH A 45 246 87 HOH WAT . E 3 HOH A 46 247 89 HOH WAT . E 3 HOH A 47 248 91 HOH WAT . E 3 HOH A 48 249 94 HOH WAT . E 3 HOH A 49 250 96 HOH WAT . F 3 HOH B 1 212 29 HOH WAT . F 3 HOH B 2 213 2 HOH WAT . F 3 HOH B 3 214 4 HOH WAT . F 3 HOH B 4 215 5 HOH WAT . F 3 HOH B 5 216 6 HOH WAT . F 3 HOH B 6 217 7 HOH WAT . F 3 HOH B 7 218 8 HOH WAT . F 3 HOH B 8 219 10 HOH WAT . F 3 HOH B 9 220 14 HOH WAT . F 3 HOH B 10 221 15 HOH WAT . F 3 HOH B 11 222 17 HOH WAT . F 3 HOH B 12 223 18 HOH WAT . F 3 HOH B 13 224 19 HOH WAT . F 3 HOH B 14 225 20 HOH WAT . F 3 HOH B 15 226 21 HOH WAT . F 3 HOH B 16 227 22 HOH WAT . F 3 HOH B 17 228 23 HOH WAT . F 3 HOH B 18 229 28 HOH WAT . F 3 HOH B 19 230 30 HOH WAT . F 3 HOH B 20 231 35 HOH WAT . F 3 HOH B 21 232 39 HOH WAT . F 3 HOH B 22 233 43 HOH WAT . F 3 HOH B 23 234 44 HOH WAT . F 3 HOH B 24 235 46 HOH WAT . F 3 HOH B 25 236 52 HOH WAT . F 3 HOH B 26 237 53 HOH WAT . F 3 HOH B 27 238 54 HOH WAT . F 3 HOH B 28 239 57 HOH WAT . F 3 HOH B 29 240 59 HOH WAT . F 3 HOH B 30 241 62 HOH WAT . F 3 HOH B 31 242 63 HOH WAT . F 3 HOH B 32 243 66 HOH WAT . F 3 HOH B 33 244 68 HOH WAT . F 3 HOH B 34 245 70 HOH WAT . F 3 HOH B 35 246 72 HOH WAT . F 3 HOH B 36 247 74 HOH WAT . F 3 HOH B 37 248 77 HOH WAT . F 3 HOH B 38 249 79 HOH WAT . F 3 HOH B 39 250 81 HOH WAT . F 3 HOH B 40 251 82 HOH WAT . F 3 HOH B 41 252 84 HOH WAT . F 3 HOH B 42 253 86 HOH WAT . F 3 HOH B 43 254 88 HOH WAT . F 3 HOH B 44 255 90 HOH WAT . F 3 HOH B 45 256 92 HOH WAT . F 3 HOH B 46 257 93 HOH WAT . F 3 HOH B 47 258 95 HOH WAT . F 3 HOH B 48 259 97 HOH WAT . F 3 HOH B 49 260 98 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BME . . . C 2 4.281 0.068 -10.441 1 51.38 ? C1 BME 200 A 1 HETATM 2 C C2 BME . . . C 2 5.602 -0.327 -9.794 1 48.19 ? C2 BME 200 A 1 HETATM 3 O O1 BME . . . C 2 4.477 1.011 -11.483 1 54.23 ? O1 BME 200 A 1 HETATM 4 S S2 BME . . . C 2 6.421 -1.721 -10.642 1 47.78 ? S2 BME 200 A 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #