data_3DUQ
#
_model_server_result.job_id            88nprXG2I-UV72reGVTt3Q 
_model_server_result.datetime_utc      '2024-11-14 23:26:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3duq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Q","auth_seq_id":701}' 
#
_entry.id    3DUQ 
#
_exptl.entry_id    3DUQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              229.402 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'LAURYL DIMETHYLAMINE-N-OXIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3DUQ 
_cell.length_a            141.3 
_cell.length_b            141.3 
_cell.length_c            187.4 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3DUQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 7 H N N 
? 7 I N N 
? 7 Q N N 
? 7 R N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 153 L HIS 153 1_555 E MG BCL . L BCL 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? 
metalc ? metalc2 A NE2 HIS 173 L HIS 173 1_555 D MG BCL . L BCL 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? 
metalc ? metalc3 A NE2 HIS 190 L HIS 190 1_555 M FE FE . M FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? 
metalc ? metalc4 A NE2 HIS 230 L HIS 230 1_555 M FE FE . M FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? 
metalc ? metalc5 B NE2 HIS 182 M HIS 182 1_555 J MG BCL . M BCL 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? 
metalc ? metalc6 B NE2 HIS 202 M HIS 202 1_555 K MG BCL . M BCL 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? 
metalc ? metalc7 B NE2 HIS 219 M HIS 219 1_555 M FE FE . M FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? 
metalc ? metalc8 B OE1 GLU 234 M GLU 234 1_555 M FE FE . M FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? 
metalc ? metalc9 B OE2 GLU 234 M GLU 234 1_555 M FE FE . M FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? 
metalc ? metalc10 B NE2 HIS 266 M HIS 266 1_555 M FE FE . M FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? 
#
_chem_comp.formula           'C14 H31 N O' 
_chem_comp.formula_weight    229.402 
_chem_comp.id                LDA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'LAURYL DIMETHYLAMINE-N-OXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 O1 LDA sing 722 n n 
N1 CM1 LDA sing 723 n n 
N1 CM2 LDA sing 724 n n 
N1 C1 LDA sing 725 n n 
CM1 HM11 LDA sing 726 n n 
CM1 HM12 LDA sing 727 n n 
CM1 HM13 LDA sing 728 n n 
CM2 HM21 LDA sing 729 n n 
CM2 HM22 LDA sing 730 n n 
CM2 HM23 LDA sing 731 n n 
C1 C2 LDA sing 732 n n 
C1 H11 LDA sing 733 n n 
C1 H12 LDA sing 734 n n 
C2 C3 LDA sing 735 n n 
C2 H21 LDA sing 736 n n 
C2 H22 LDA sing 737 n n 
C3 C4 LDA sing 738 n n 
C3 H31 LDA sing 739 n n 
C3 H32 LDA sing 740 n n 
C4 C5 LDA sing 741 n n 
C4 H41 LDA sing 742 n n 
C4 H42 LDA sing 743 n n 
C5 C6 LDA sing 744 n n 
C5 H51 LDA sing 745 n n 
C5 H52 LDA sing 746 n n 
C6 C7 LDA sing 747 n n 
C6 H61 LDA sing 748 n n 
C6 H62 LDA sing 749 n n 
C7 C8 LDA sing 750 n n 
C7 H71 LDA sing 751 n n 
C7 H72 LDA sing 752 n n 
C8 C9 LDA sing 753 n n 
C8 H81 LDA sing 754 n n 
C8 H82 LDA sing 755 n n 
C9 C10 LDA sing 756 n n 
C9 H91 LDA sing 757 n n 
C9 H92 LDA sing 758 n n 
C10 C11 LDA sing 759 n n 
C10 H101 LDA sing 760 n n 
C10 H102 LDA sing 761 n n 
C11 C12 LDA sing 762 n n 
C11 H111 LDA sing 763 n n 
C11 H112 LDA sing 764 n n 
C12 H121 LDA sing 765 n n 
C12 H122 LDA sing 766 n n 
C12 H123 LDA sing 767 n n 
#
_atom_sites.entry_id                     3DUQ 
_atom_sites.fract_transf_matrix[1][1]    0.007077 
_atom_sites.fract_transf_matrix[1][2]    0.004086 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008172 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005336 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 BCL L 1 502 502 BCL BCL . 
E 4 BCL L 1 501 501 BCL BCL . 
F 5 BPH L 1 503 503 BPH BPH . 
G 6 U10 L 1 504 504 U10 U10 . 
H 7 LDA L 1 704 704 LDA LDA . 
I 7 LDA L 1 709 709 LDA LDA . 
J 4 BCL M 1 501 501 BCL BCL . 
K 4 BCL M 1 502 502 BCL BCL . 
L 5 BPH M 1 503 503 BPH BPH . 
M 8 FE M 1 500 500 FE FE . 
N 6 U10 M 1 504 504 U10 U10 . 
O 9 SPN M 1 600 600 SPN SPN . 
P 10 CDL M 1 800 800 CDL CDL . 
Q 7 LDA M 1 701 701 LDA LDA . 
R 7 LDA H 1 703 703 LDA LDA . 
S 11 HOH L 1 1001 710 HOH HOH . 
S 11 HOH L 2 1002 711 HOH HOH . 
S 11 HOH L 3 1003 712 HOH HOH . 
S 11 HOH L 4 1004 713 HOH HOH . 
S 11 HOH L 5 1005 714 HOH HOH . 
S 11 HOH L 6 1006 715 HOH HOH . 
S 11 HOH L 7 1007 716 HOH HOH . 
S 11 HOH L 8 1008 717 HOH HOH . 
S 11 HOH L 9 1009 718 HOH HOH . 
S 11 HOH L 10 1010 719 HOH HOH . 
S 11 HOH L 11 1011 720 HOH HOH . 
S 11 HOH L 12 1012 721 HOH HOH . 
S 11 HOH L 13 1013 722 HOH HOH . 
S 11 HOH L 14 1014 723 HOH HOH . 
S 11 HOH L 15 1015 724 HOH HOH . 
S 11 HOH L 16 1016 725 HOH HOH . 
S 11 HOH L 17 1017 726 HOH HOH . 
S 11 HOH L 18 1018 727 HOH HOH . 
S 11 HOH L 19 1019 728 HOH HOH . 
S 11 HOH L 20 1020 729 HOH HOH . 
S 11 HOH L 21 1021 730 HOH HOH . 
S 11 HOH L 22 1022 731 HOH HOH . 
S 11 HOH L 23 1023 732 HOH HOH . 
S 11 HOH L 24 1024 733 HOH HOH . 
S 11 HOH L 25 1025 734 HOH HOH . 
S 11 HOH L 26 1026 735 HOH HOH . 
S 11 HOH L 27 1027 736 HOH HOH . 
S 11 HOH L 28 1028 737 HOH HOH . 
S 11 HOH L 29 1029 738 HOH HOH . 
S 11 HOH L 30 1030 739 HOH HOH . 
S 11 HOH L 31 1031 740 HOH HOH . 
S 11 HOH L 32 1032 741 HOH HOH . 
S 11 HOH L 33 1033 742 HOH HOH . 
S 11 HOH L 34 1034 743 HOH HOH . 
S 11 HOH L 35 1035 744 HOH HOH . 
S 11 HOH L 36 1036 745 HOH HOH . 
T 11 HOH M 1 1037 801 HOH HOH . 
T 11 HOH M 2 1038 802 HOH HOH . 
T 11 HOH M 3 1039 803 HOH HOH . 
T 11 HOH M 4 1040 804 HOH HOH . 
T 11 HOH M 5 1041 805 HOH HOH . 
T 11 HOH M 6 1042 806 HOH HOH . 
T 11 HOH M 7 1043 807 HOH HOH . 
T 11 HOH M 8 1044 808 HOH HOH . 
T 11 HOH M 9 1045 809 HOH HOH . 
T 11 HOH M 10 1046 810 HOH HOH . 
T 11 HOH M 11 1047 811 HOH HOH . 
T 11 HOH M 12 1048 812 HOH HOH . 
T 11 HOH M 13 1049 813 HOH HOH . 
T 11 HOH M 14 1050 814 HOH HOH . 
T 11 HOH M 15 1051 815 HOH HOH . 
T 11 HOH M 16 1052 816 HOH HOH . 
T 11 HOH M 17 1053 817 HOH HOH . 
T 11 HOH M 18 1054 818 HOH HOH . 
T 11 HOH M 19 1055 819 HOH HOH . 
T 11 HOH M 20 1056 820 HOH HOH . 
T 11 HOH M 21 1057 821 HOH HOH . 
T 11 HOH M 22 1058 822 HOH HOH . 
T 11 HOH M 23 1059 823 HOH HOH . 
T 11 HOH M 24 1060 824 HOH HOH . 
T 11 HOH M 25 1061 825 HOH HOH . 
T 11 HOH M 26 1062 826 HOH HOH . 
T 11 HOH M 27 1063 827 HOH HOH . 
T 11 HOH M 28 1064 828 HOH HOH . 
T 11 HOH M 29 1065 829 HOH HOH . 
T 11 HOH M 30 1066 830 HOH HOH . 
T 11 HOH M 31 1067 831 HOH HOH . 
T 11 HOH M 32 1068 832 HOH HOH . 
T 11 HOH M 33 1069 833 HOH HOH . 
T 11 HOH M 34 1070 834 HOH HOH . 
T 11 HOH M 35 1071 835 HOH HOH . 
T 11 HOH M 36 1072 836 HOH HOH . 
T 11 HOH M 37 1073 837 HOH HOH . 
T 11 HOH M 38 1074 838 HOH HOH . 
T 11 HOH M 39 1075 839 HOH HOH . 
T 11 HOH M 40 1076 840 HOH HOH . 
T 11 HOH M 41 1077 841 HOH HOH . 
T 11 HOH M 42 1078 842 HOH HOH . 
T 11 HOH M 43 1079 843 HOH HOH . 
T 11 HOH M 44 1080 844 HOH HOH . 
T 11 HOH M 45 1081 845 HOH HOH . 
T 11 HOH M 46 1082 846 HOH HOH . 
T 11 HOH M 47 1083 847 HOH HOH . 
T 11 HOH M 48 1084 848 HOH HOH . 
U 11 HOH H 1 1085 704 HOH HOH . 
U 11 HOH H 2 1086 705 HOH HOH . 
U 11 HOH H 3 1087 706 HOH HOH . 
U 11 HOH H 4 1088 707 HOH HOH . 
U 11 HOH H 5 1089 708 HOH HOH . 
U 11 HOH H 6 1090 709 HOH HOH . 
U 11 HOH H 7 1091 710 HOH HOH . 
U 11 HOH H 8 1092 711 HOH HOH . 
U 11 HOH H 9 1093 712 HOH HOH . 
U 11 HOH H 10 1094 713 HOH HOH . 
U 11 HOH H 11 1095 714 HOH HOH . 
U 11 HOH H 12 1096 715 HOH HOH . 
U 11 HOH H 13 1097 716 HOH HOH . 
U 11 HOH H 14 1098 717 HOH HOH . 
U 11 HOH H 15 1099 718 HOH HOH . 
U 11 HOH H 16 1100 719 HOH HOH . 
U 11 HOH H 17 1101 720 HOH HOH . 
U 11 HOH H 18 1102 721 HOH HOH . 
U 11 HOH H 19 1103 722 HOH HOH . 
U 11 HOH H 20 1104 723 HOH HOH . 
U 11 HOH H 21 1105 724 HOH HOH . 
U 11 HOH H 22 1106 725 HOH HOH . 
U 11 HOH H 23 1107 726 HOH HOH . 
U 11 HOH H 24 1108 727 HOH HOH . 
U 11 HOH H 25 1109 728 HOH HOH . 
U 11 HOH H 26 1110 729 HOH HOH . 
U 11 HOH H 27 1111 730 HOH HOH . 
U 11 HOH H 28 1112 731 HOH HOH . 
U 11 HOH H 29 1113 732 HOH HOH . 
U 11 HOH H 30 1114 733 HOH HOH . 
U 11 HOH H 31 1115 734 HOH HOH . 
U 11 HOH H 32 1116 735 HOH HOH . 
U 11 HOH H 33 1117 736 HOH HOH . 
U 11 HOH H 34 1118 737 HOH HOH . 
U 11 HOH H 35 1119 738 HOH HOH . 
U 11 HOH H 36 1120 739 HOH HOH . 
U 11 HOH H 37 1121 740 HOH HOH . 
U 11 HOH H 38 1122 741 HOH HOH . 
U 11 HOH H 39 1123 742 HOH HOH . 
U 11 HOH H 40 1124 743 HOH HOH . 
U 11 HOH H 41 1125 744 HOH HOH . 
U 11 HOH H 42 1126 745 HOH HOH . 
U 11 HOH H 43 1127 746 HOH HOH . 
U 11 HOH H 44 1128 747 HOH HOH . 
U 11 HOH H 45 1129 748 HOH HOH . 
U 11 HOH H 46 1130 749 HOH HOH . 
U 11 HOH H 47 1131 750 HOH HOH . 
U 11 HOH H 48 1132 751 HOH HOH . 
U 11 HOH H 49 1133 752 HOH HOH . 
U 11 HOH H 50 1134 753 HOH HOH . 
U 11 HOH H 51 1135 754 HOH HOH . 
U 11 HOH H 52 1136 755 HOH HOH . 
U 11 HOH H 53 1137 756 HOH HOH . 
U 11 HOH H 54 1138 757 HOH HOH . 
U 11 HOH H 55 1139 758 HOH HOH . 
U 11 HOH H 56 1140 759 HOH HOH . 
U 11 HOH H 57 1141 760 HOH HOH . 
U 11 HOH H 58 1142 761 HOH HOH . 
U 11 HOH H 59 1143 762 HOH HOH . 
U 11 HOH H 60 1144 763 HOH HOH . 
U 11 HOH H 61 1145 764 HOH HOH . 
U 11 HOH H 62 1146 765 HOH HOH . 
U 11 HOH H 63 1147 766 HOH HOH . 
U 11 HOH H 64 1148 767 HOH HOH . 
U 11 HOH H 65 1149 768 HOH HOH . 
U 11 HOH H 66 1150 769 HOH HOH . 
U 11 HOH H 67 1151 770 HOH HOH . 
U 11 HOH H 68 1152 771 HOH HOH . 
U 11 HOH H 69 1153 772 HOH HOH . 
U 11 HOH H 70 1154 773 HOH HOH . 
U 11 HOH H 71 1155 774 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 LDA . . . Q 7 19.111 101.614 24.46 1 76.16 ? N1 LDA 701 M 1 
HETATM 2 O O1 LDA . . . Q 7 19.327 101.732 25.647 1 79.36 ? O1 LDA 701 M 1 
HETATM 3 C CM1 LDA . . . Q 7 17.979 102.483 24.065 1 74.22 ? CM1 LDA 701 M 1 
HETATM 4 C CM2 LDA . . . Q 7 20.301 102.027 23.729 1 74.84 ? CM2 LDA 701 M 1 
HETATM 5 C C1 LDA . . . Q 7 18.806 100.186 24.164 1 71.97 ? C1 LDA 701 M 1 
HETATM 6 C C2 LDA . . . Q 7 17.841 99.051 23.801 1 66.55 ? C2 LDA 701 M 1 
HETATM 7 C C3 LDA . . . Q 7 18.586 97.716 23.686 1 64.68 ? C3 LDA 701 M 1 
HETATM 8 C C4 LDA . . . Q 7 18.225 96.961 22.405 1 63.67 ? C4 LDA 701 M 1 
HETATM 9 C C5 LDA . . . Q 7 19.103 95.718 22.199 1 64.53 ? C5 LDA 701 M 1 
HETATM 10 C C6 LDA . . . Q 7 18.812 95.049 20.866 1 65.35 ? C6 LDA 701 M 1 
HETATM 11 C C7 LDA . . . Q 7 20.072 94.515 20.245 1 68.65 ? C7 LDA 701 M 1 
HETATM 12 C C8 LDA . . . Q 7 20.434 93.117 20.772 1 70.22 ? C8 LDA 701 M 1 
HETATM 13 C C9 LDA . . . Q 7 21.751 92.612 20.126 1 68.21 ? C9 LDA 701 M 1 
HETATM 14 C C10 LDA . . . Q 7 21.654 91.189 19.537 1 61.82 ? C10 LDA 701 M 1 
HETATM 15 C C11 LDA . . . Q 7 22.829 90.892 18.584 1 62.35 ? C11 LDA 701 M 1 
HETATM 16 C C12 LDA . . . Q 7 23.977 90.108 19.222 1 55.6 ? C12 LDA 701 M 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           296 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           16 
#