data_3DUS # _model_server_result.job_id fNBZPOTlGckwErkC05Vspw _model_server_result.datetime_utc '2024-11-23 00:35:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3dus # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":114}' # _entry.id 3DUS # _exptl.entry_id 3DUS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3DUS _cell.length_a 72.47 _cell.length_b 72.56 _cell.length_c 85.91 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3DUS _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,K,L 1 1 C,D,G,H,I,J,M,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 A CYS 23 1_555 A SG CYS 94 A CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 B SG CYS 22 B CYS 22 1_555 B SG CYS 98 B CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 C SG CYS 23 C CYS 23 1_555 C SG CYS 94 C CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf4 D SG CYS 22 D CYS 22 1_555 D SG CYS 98 D CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 246 n n O1 HO1 PG4 sing 247 n n C1 C2 PG4 sing 248 n n C1 H11 PG4 sing 249 n n C1 H12 PG4 sing 250 n n C2 O2 PG4 sing 251 n n C2 H21 PG4 sing 252 n n C2 H22 PG4 sing 253 n n O2 C3 PG4 sing 254 n n C3 C4 PG4 sing 255 n n C3 H31 PG4 sing 256 n n C3 H32 PG4 sing 257 n n C4 O3 PG4 sing 258 n n C4 H41 PG4 sing 259 n n C4 H42 PG4 sing 260 n n O3 C5 PG4 sing 261 n n C5 C6 PG4 sing 262 n n C5 H51 PG4 sing 263 n n C5 H52 PG4 sing 264 n n C6 O4 PG4 sing 265 n n C6 H61 PG4 sing 266 n n C6 H62 PG4 sing 267 n n O4 C7 PG4 sing 268 n n C7 C8 PG4 sing 269 n n C7 H71 PG4 sing 270 n n C7 H72 PG4 sing 271 n n C8 O5 PG4 sing 272 n n C8 H81 PG4 sing 273 n n C8 H82 PG4 sing 274 n n O5 HO5 PG4 sing 275 n n # _atom_sites.entry_id 3DUS _atom_sites.fract_transf_matrix[1][1] 0.013799 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013782 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01164 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 KDO A 1 107 107 KDO KDO . F 4 PG4 B 1 114 109 PG4 PG4 . G 3 KDO C 1 108 108 KDO KDO . H 5 MG C 1 109 109 MG MG . I 5 MG C 1 110 110 MG MG . J 4 PG4 D 1 114 110 PG4 PG4 . K 6 HOH A 1 108 2 HOH HOH . K 6 HOH A 2 109 3 HOH HOH . K 6 HOH A 3 110 6 HOH HOH . K 6 HOH A 4 111 7 HOH HOH . K 6 HOH A 5 112 10 HOH HOH . K 6 HOH A 6 113 11 HOH HOH . K 6 HOH A 7 114 12 HOH HOH . K 6 HOH A 8 115 14 HOH HOH . K 6 HOH A 9 116 19 HOH HOH . K 6 HOH A 10 117 20 HOH HOH . K 6 HOH A 11 118 21 HOH HOH . K 6 HOH A 12 119 29 HOH HOH . K 6 HOH A 13 120 33 HOH HOH . K 6 HOH A 14 121 36 HOH HOH . K 6 HOH A 15 122 37 HOH HOH . K 6 HOH A 16 123 39 HOH HOH . K 6 HOH A 17 124 45 HOH HOH . K 6 HOH A 18 125 47 HOH HOH . K 6 HOH A 19 126 56 HOH HOH . K 6 HOH A 20 127 58 HOH HOH . K 6 HOH A 21 128 60 HOH HOH . K 6 HOH A 22 129 65 HOH HOH . K 6 HOH A 23 130 69 HOH HOH . K 6 HOH A 24 131 71 HOH HOH . K 6 HOH A 25 132 72 HOH HOH . K 6 HOH A 26 133 73 HOH HOH . K 6 HOH A 27 134 75 HOH HOH . K 6 HOH A 28 135 76 HOH HOH . K 6 HOH A 29 136 80 HOH HOH . K 6 HOH A 30 137 86 HOH HOH . K 6 HOH A 31 138 88 HOH HOH . K 6 HOH A 32 139 90 HOH HOH . K 6 HOH A 33 140 92 HOH HOH . K 6 HOH A 34 141 95 HOH HOH . K 6 HOH A 35 142 97 HOH HOH . K 6 HOH A 36 143 99 HOH HOH . K 6 HOH A 37 144 100 HOH HOH . K 6 HOH A 38 145 101 HOH HOH . K 6 HOH A 39 146 102 HOH HOH . K 6 HOH A 40 147 106 HOH HOH . K 6 HOH A 41 148 109 HOH HOH . K 6 HOH A 42 149 111 HOH HOH . K 6 HOH A 43 150 115 HOH HOH . K 6 HOH A 44 151 116 HOH HOH . K 6 HOH A 45 152 120 HOH HOH . K 6 HOH A 46 153 121 HOH HOH . K 6 HOH A 47 154 122 HOH HOH . K 6 HOH A 48 155 123 HOH HOH . K 6 HOH A 49 156 124 HOH HOH . K 6 HOH A 50 157 129 HOH HOH . K 6 HOH A 51 158 130 HOH HOH . K 6 HOH A 52 159 134 HOH HOH . K 6 HOH A 53 160 135 HOH HOH . K 6 HOH A 54 161 138 HOH HOH . K 6 HOH A 55 162 139 HOH HOH . K 6 HOH A 56 163 140 HOH HOH . K 6 HOH A 57 164 142 HOH HOH . K 6 HOH A 58 165 144 HOH HOH . K 6 HOH A 59 166 145 HOH HOH . K 6 HOH A 60 167 150 HOH HOH . K 6 HOH A 61 168 151 HOH HOH . K 6 HOH A 62 169 155 HOH HOH . K 6 HOH A 63 170 158 HOH HOH . K 6 HOH A 64 171 160 HOH HOH . K 6 HOH A 65 172 163 HOH HOH . K 6 HOH A 66 173 167 HOH HOH . K 6 HOH A 67 174 169 HOH HOH . K 6 HOH A 68 175 171 HOH HOH . K 6 HOH A 69 176 173 HOH HOH . K 6 HOH A 70 177 174 HOH HOH . K 6 HOH A 71 178 179 HOH HOH . K 6 HOH A 72 179 181 HOH HOH . K 6 HOH A 73 180 183 HOH HOH . K 6 HOH A 74 181 184 HOH HOH . K 6 HOH A 75 182 194 HOH HOH . K 6 HOH A 76 183 197 HOH HOH . K 6 HOH A 77 184 199 HOH HOH . K 6 HOH A 78 185 204 HOH HOH . K 6 HOH A 79 186 207 HOH HOH . K 6 HOH A 80 187 213 HOH HOH . K 6 HOH A 81 188 216 HOH HOH . K 6 HOH A 82 189 217 HOH HOH . K 6 HOH A 83 190 219 HOH HOH . K 6 HOH A 84 191 221 HOH HOH . K 6 HOH A 85 192 222 HOH HOH . K 6 HOH A 86 193 224 HOH HOH . K 6 HOH A 87 194 225 HOH HOH . K 6 HOH A 88 195 227 HOH HOH . K 6 HOH A 89 196 235 HOH HOH . K 6 HOH A 90 197 238 HOH HOH . K 6 HOH A 91 198 240 HOH HOH . L 6 HOH B 1 115 1 HOH HOH . L 6 HOH B 2 116 15 HOH HOH . L 6 HOH B 3 117 22 HOH HOH . L 6 HOH B 4 118 24 HOH HOH . L 6 HOH B 5 119 34 HOH HOH . L 6 HOH B 6 120 42 HOH HOH . L 6 HOH B 7 121 48 HOH HOH . L 6 HOH B 8 122 51 HOH HOH . L 6 HOH B 9 123 53 HOH HOH . L 6 HOH B 10 124 54 HOH HOH . L 6 HOH B 11 125 55 HOH HOH . L 6 HOH B 12 126 59 HOH HOH . L 6 HOH B 13 127 61 HOH HOH . L 6 HOH B 14 128 74 HOH HOH . L 6 HOH B 15 129 82 HOH HOH . L 6 HOH B 16 130 83 HOH HOH . L 6 HOH B 17 131 84 HOH HOH . L 6 HOH B 18 132 85 HOH HOH . L 6 HOH B 19 133 87 HOH HOH . L 6 HOH B 20 134 93 HOH HOH . L 6 HOH B 21 135 105 HOH HOH . L 6 HOH B 22 136 108 HOH HOH . L 6 HOH B 23 137 110 HOH HOH . L 6 HOH B 24 138 112 HOH HOH . L 6 HOH B 25 139 113 HOH HOH . L 6 HOH B 26 140 114 HOH HOH . L 6 HOH B 27 141 118 HOH HOH . L 6 HOH B 28 142 126 HOH HOH . L 6 HOH B 29 143 127 HOH HOH . L 6 HOH B 30 144 128 HOH HOH . L 6 HOH B 31 145 131 HOH HOH . L 6 HOH B 32 146 132 HOH HOH . L 6 HOH B 33 147 133 HOH HOH . L 6 HOH B 34 148 136 HOH HOH . L 6 HOH B 35 149 141 HOH HOH . L 6 HOH B 36 150 146 HOH HOH . L 6 HOH B 37 151 147 HOH HOH . L 6 HOH B 38 152 148 HOH HOH . L 6 HOH B 39 153 149 HOH HOH . L 6 HOH B 40 154 152 HOH HOH . L 6 HOH B 41 155 153 HOH HOH . L 6 HOH B 42 156 154 HOH HOH . L 6 HOH B 43 157 156 HOH HOH . L 6 HOH B 44 158 157 HOH HOH . L 6 HOH B 45 159 159 HOH HOH . L 6 HOH B 46 160 161 HOH HOH . L 6 HOH B 47 161 165 HOH HOH . L 6 HOH B 48 162 166 HOH HOH . L 6 HOH B 49 163 168 HOH HOH . L 6 HOH B 50 164 175 HOH HOH . L 6 HOH B 51 165 176 HOH HOH . L 6 HOH B 52 166 177 HOH HOH . L 6 HOH B 53 167 178 HOH HOH . L 6 HOH B 54 168 182 HOH HOH . L 6 HOH B 55 169 185 HOH HOH . L 6 HOH B 56 170 186 HOH HOH . L 6 HOH B 57 171 187 HOH HOH . L 6 HOH B 58 172 189 HOH HOH . L 6 HOH B 59 173 192 HOH HOH . L 6 HOH B 60 174 193 HOH HOH . L 6 HOH B 61 175 196 HOH HOH . L 6 HOH B 62 176 198 HOH HOH . L 6 HOH B 63 177 200 HOH HOH . L 6 HOH B 64 178 201 HOH HOH . L 6 HOH B 65 179 202 HOH HOH . L 6 HOH B 66 180 205 HOH HOH . L 6 HOH B 67 181 206 HOH HOH . L 6 HOH B 68 182 208 HOH HOH . L 6 HOH B 69 183 212 HOH HOH . L 6 HOH B 70 184 214 HOH HOH . L 6 HOH B 71 185 215 HOH HOH . L 6 HOH B 72 186 226 HOH HOH . L 6 HOH B 73 187 228 HOH HOH . L 6 HOH B 74 188 229 HOH HOH . L 6 HOH B 75 189 231 HOH HOH . L 6 HOH B 76 190 232 HOH HOH . L 6 HOH B 77 191 234 HOH HOH . L 6 HOH B 78 192 237 HOH HOH . L 6 HOH B 79 193 239 HOH HOH . M 6 HOH C 1 111 4 HOH HOH . M 6 HOH C 2 112 5 HOH HOH . M 6 HOH C 3 113 8 HOH HOH . M 6 HOH C 4 114 9 HOH HOH . M 6 HOH C 5 115 13 HOH HOH . M 6 HOH C 6 116 16 HOH HOH . M 6 HOH C 7 117 17 HOH HOH . M 6 HOH C 8 118 18 HOH HOH . M 6 HOH C 9 119 25 HOH HOH . M 6 HOH C 10 120 26 HOH HOH . M 6 HOH C 11 121 27 HOH HOH . M 6 HOH C 12 122 28 HOH HOH . M 6 HOH C 13 123 30 HOH HOH . M 6 HOH C 14 124 31 HOH HOH . M 6 HOH C 15 125 35 HOH HOH . M 6 HOH C 16 126 40 HOH HOH . M 6 HOH C 17 127 41 HOH HOH . M 6 HOH C 18 128 43 HOH HOH . M 6 HOH C 19 129 44 HOH HOH . M 6 HOH C 20 130 49 HOH HOH . M 6 HOH C 21 131 50 HOH HOH . M 6 HOH C 22 132 52 HOH HOH . M 6 HOH C 23 133 62 HOH HOH . M 6 HOH C 24 134 63 HOH HOH . M 6 HOH C 25 135 64 HOH HOH . M 6 HOH C 26 136 67 HOH HOH . M 6 HOH C 27 137 77 HOH HOH . M 6 HOH C 28 138 78 HOH HOH . M 6 HOH C 29 139 79 HOH HOH . M 6 HOH C 30 140 81 HOH HOH . M 6 HOH C 31 141 89 HOH HOH . M 6 HOH C 32 142 91 HOH HOH . M 6 HOH C 33 143 94 HOH HOH . M 6 HOH C 34 144 96 HOH HOH . M 6 HOH C 35 145 98 HOH HOH . M 6 HOH C 36 146 103 HOH HOH . M 6 HOH C 37 147 104 HOH HOH . M 6 HOH C 38 148 107 HOH HOH . M 6 HOH C 39 149 117 HOH HOH . M 6 HOH C 40 150 119 HOH HOH . M 6 HOH C 41 151 125 HOH HOH . M 6 HOH C 42 152 137 HOH HOH . M 6 HOH C 43 153 143 HOH HOH . M 6 HOH C 44 154 162 HOH HOH . M 6 HOH C 45 155 164 HOH HOH . M 6 HOH C 46 156 170 HOH HOH . M 6 HOH C 47 157 172 HOH HOH . M 6 HOH C 48 158 180 HOH HOH . M 6 HOH C 49 159 188 HOH HOH . M 6 HOH C 50 160 190 HOH HOH . M 6 HOH C 51 161 191 HOH HOH . M 6 HOH C 52 162 195 HOH HOH . M 6 HOH C 53 163 203 HOH HOH . M 6 HOH C 54 164 209 HOH HOH . M 6 HOH C 55 165 210 HOH HOH . M 6 HOH C 56 166 211 HOH HOH . M 6 HOH C 57 167 218 HOH HOH . M 6 HOH C 58 168 220 HOH HOH . M 6 HOH C 59 169 223 HOH HOH . M 6 HOH C 60 170 230 HOH HOH . M 6 HOH C 61 171 233 HOH HOH . M 6 HOH C 62 172 236 HOH HOH . N 6 HOH D 1 115 23 HOH HOH . N 6 HOH D 2 116 32 HOH HOH . N 6 HOH D 3 117 38 HOH HOH . N 6 HOH D 4 118 46 HOH HOH . N 6 HOH D 5 119 57 HOH HOH . N 6 HOH D 6 120 66 HOH HOH . N 6 HOH D 7 121 68 HOH HOH . N 6 HOH D 8 122 70 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . F 4 -3.243 -5.019 5.873 1 52.74 ? O1 PG4 114 B 1 HETATM 2 C C1 PG4 . . . F 4 -4.248 -4.746 4.89 1 52.97 ? C1 PG4 114 B 1 HETATM 3 C C2 PG4 . . . F 4 -3.584 -4.497 3.541 1 53.34 ? C2 PG4 114 B 1 HETATM 4 O O2 PG4 . . . F 4 -4.545 -4.653 2.497 1 57.47 ? O2 PG4 114 B 1 HETATM 5 C C3 PG4 . . . F 4 -3.943 -4.499 1.214 1 52.73 ? C3 PG4 114 B 1 HETATM 6 C C4 PG4 . . . F 4 -4.849 -5.088 0.142 1 54.81 ? C4 PG4 114 B 1 HETATM 7 O O3 PG4 . . . F 4 -5.259 -6.393 0.544 1 56.5 ? O3 PG4 114 B 1 HETATM 8 C C5 PG4 . . . F 4 -5.451 -7.247 -0.582 1 56.67 ? C5 PG4 114 B 1 HETATM 9 C C6 PG4 . . . F 4 -6.228 -8.491 -0.17 1 55.75 ? C6 PG4 114 B 1 HETATM 10 O O4 PG4 . . . F 4 -5.765 -8.973 1.09 1 54.02 ? O4 PG4 114 B 1 HETATM 11 C C7 PG4 . . . F 4 -6.354 -10.232 1.409 1 52.67 ? C7 PG4 114 B 1 HETATM 12 C C8 PG4 . . . F 4 -6.6 -10.33 2.911 1 54.04 ? C8 PG4 114 B 1 HETATM 13 O O5 PG4 . . . F 4 -5.371 -10.578 3.603 1 53.69 ? O5 PG4 114 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #