data_3DUU
#
_model_server_result.job_id            g6aJnJk4HTyU1xJSG9gk8w 
_model_server_result.datetime_utc      '2024-11-26 11:07:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3duu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":113}' 
#
_entry.id    3DUU 
#
_exptl.entry_id    3DUU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3DUU 
_cell.length_a            71.6 
_cell.length_b            71.76 
_cell.length_c            86.21 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3DUU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
C,D,H,I,J,K,N,O 1 1 
A,B,E,F,G,L,M 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 H N N 
? 3 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 23 A CYS 23 1_555 A SG CYS 94 A CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf2 B SG CYS 22 B CYS 22 1_555 B SG CYS 98 B CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
disulf ? disulf3 C SG CYS 23 C CYS 23 1_555 C SG CYS 94 C CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf4 D SG CYS 22 D CYS 22 1_555 D SG CYS 98 D CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
metalc ? metalc1 H MG MG . C MG 111 1_555 N O HOH . C HOH 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3DUU 
_atom_sites.fract_transf_matrix[1][1]    0.013966 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013935 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.0116 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 MG A 1 112 112 MG MG . 
F 4 KDO B 1 114 107 KDO KDO . 
G 5 PG4 B 1 115 109 PG4 PG4 . 
H 3 MG C 1 111 111 MG MG . 
I 3 MG C 1 113 113 MG MG . 
J 4 KDO D 1 114 108 KDO KDO . 
K 5 PG4 D 1 115 110 PG4 PG4 . 
L 6 HOH A 1 113 3 HOH HOH . 
L 6 HOH A 2 114 4 HOH HOH . 
L 6 HOH A 3 115 5 HOH HOH . 
L 6 HOH A 4 116 9 HOH HOH . 
L 6 HOH A 5 117 13 HOH HOH . 
L 6 HOH A 6 118 17 HOH HOH . 
L 6 HOH A 7 119 20 HOH HOH . 
L 6 HOH A 8 120 22 HOH HOH . 
L 6 HOH A 9 121 24 HOH HOH . 
L 6 HOH A 10 122 31 HOH HOH . 
L 6 HOH A 11 123 37 HOH HOH . 
L 6 HOH A 12 124 39 HOH HOH . 
L 6 HOH A 13 125 40 HOH HOH . 
L 6 HOH A 14 126 44 HOH HOH . 
L 6 HOH A 15 127 46 HOH HOH . 
L 6 HOH A 16 128 52 HOH HOH . 
L 6 HOH A 17 129 53 HOH HOH . 
L 6 HOH A 18 130 56 HOH HOH . 
L 6 HOH A 19 131 58 HOH HOH . 
L 6 HOH A 20 132 64 HOH HOH . 
L 6 HOH A 21 133 65 HOH HOH . 
L 6 HOH A 22 134 69 HOH HOH . 
L 6 HOH A 23 135 77 HOH HOH . 
L 6 HOH A 24 136 79 HOH HOH . 
L 6 HOH A 25 137 82 HOH HOH . 
L 6 HOH A 26 138 85 HOH HOH . 
L 6 HOH A 27 139 90 HOH HOH . 
L 6 HOH A 28 140 96 HOH HOH . 
L 6 HOH A 29 141 106 HOH HOH . 
L 6 HOH A 30 142 114 HOH HOH . 
L 6 HOH A 31 143 115 HOH HOH . 
L 6 HOH A 32 144 121 HOH HOH . 
L 6 HOH A 33 145 124 HOH HOH . 
L 6 HOH A 34 146 126 HOH HOH . 
L 6 HOH A 35 147 142 HOH HOH . 
L 6 HOH A 36 148 144 HOH HOH . 
L 6 HOH A 37 149 146 HOH HOH . 
L 6 HOH A 38 150 147 HOH HOH . 
L 6 HOH A 39 151 150 HOH HOH . 
L 6 HOH A 40 152 152 HOH HOH . 
L 6 HOH A 41 153 153 HOH HOH . 
L 6 HOH A 42 154 154 HOH HOH . 
L 6 HOH A 43 155 155 HOH HOH . 
L 6 HOH A 44 156 158 HOH HOH . 
L 6 HOH A 45 157 163 HOH HOH . 
L 6 HOH A 46 158 169 HOH HOH . 
L 6 HOH A 47 159 170 HOH HOH . 
L 6 HOH A 48 160 178 HOH HOH . 
L 6 HOH A 49 161 189 HOH HOH . 
L 6 HOH A 50 162 190 HOH HOH . 
L 6 HOH A 51 163 191 HOH HOH . 
M 6 HOH B 1 116 11 HOH HOH . 
M 6 HOH B 2 117 12 HOH HOH . 
M 6 HOH B 3 118 23 HOH HOH . 
M 6 HOH B 4 119 26 HOH HOH . 
M 6 HOH B 5 120 32 HOH HOH . 
M 6 HOH B 6 121 33 HOH HOH . 
M 6 HOH B 7 122 34 HOH HOH . 
M 6 HOH B 8 123 41 HOH HOH . 
M 6 HOH B 9 124 47 HOH HOH . 
M 6 HOH B 10 125 49 HOH HOH . 
M 6 HOH B 11 126 54 HOH HOH . 
M 6 HOH B 12 127 59 HOH HOH . 
M 6 HOH B 13 128 74 HOH HOH . 
M 6 HOH B 14 129 75 HOH HOH . 
M 6 HOH B 15 130 76 HOH HOH . 
M 6 HOH B 16 131 80 HOH HOH . 
M 6 HOH B 17 132 81 HOH HOH . 
M 6 HOH B 18 133 84 HOH HOH . 
M 6 HOH B 19 134 87 HOH HOH . 
M 6 HOH B 20 135 93 HOH HOH . 
M 6 HOH B 21 136 98 HOH HOH . 
M 6 HOH B 22 137 99 HOH HOH . 
M 6 HOH B 23 138 103 HOH HOH . 
M 6 HOH B 24 139 105 HOH HOH . 
M 6 HOH B 25 140 107 HOH HOH . 
M 6 HOH B 26 141 113 HOH HOH . 
M 6 HOH B 27 142 118 HOH HOH . 
M 6 HOH B 28 143 123 HOH HOH . 
M 6 HOH B 29 144 125 HOH HOH . 
M 6 HOH B 30 145 127 HOH HOH . 
M 6 HOH B 31 146 130 HOH HOH . 
M 6 HOH B 32 147 134 HOH HOH . 
M 6 HOH B 33 148 136 HOH HOH . 
M 6 HOH B 34 149 138 HOH HOH . 
M 6 HOH B 35 150 139 HOH HOH . 
M 6 HOH B 36 151 140 HOH HOH . 
M 6 HOH B 37 152 141 HOH HOH . 
M 6 HOH B 38 153 149 HOH HOH . 
M 6 HOH B 39 154 151 HOH HOH . 
M 6 HOH B 40 155 156 HOH HOH . 
M 6 HOH B 41 156 159 HOH HOH . 
M 6 HOH B 42 157 160 HOH HOH . 
M 6 HOH B 43 158 166 HOH HOH . 
M 6 HOH B 44 159 168 HOH HOH . 
M 6 HOH B 45 160 172 HOH HOH . 
M 6 HOH B 46 161 174 HOH HOH . 
M 6 HOH B 47 162 175 HOH HOH . 
M 6 HOH B 48 163 177 HOH HOH . 
M 6 HOH B 49 164 180 HOH HOH . 
M 6 HOH B 50 165 181 HOH HOH . 
M 6 HOH B 51 166 186 HOH HOH . 
M 6 HOH B 52 167 188 HOH HOH . 
N 6 HOH C 1 114 1 HOH HOH . 
N 6 HOH C 2 115 2 HOH HOH . 
N 6 HOH C 3 116 7 HOH HOH . 
N 6 HOH C 4 117 10 HOH HOH . 
N 6 HOH C 5 118 16 HOH HOH . 
N 6 HOH C 6 119 21 HOH HOH . 
N 6 HOH C 7 120 36 HOH HOH . 
N 6 HOH C 8 121 45 HOH HOH . 
N 6 HOH C 9 122 48 HOH HOH . 
N 6 HOH C 10 123 50 HOH HOH . 
N 6 HOH C 11 124 51 HOH HOH . 
N 6 HOH C 12 125 55 HOH HOH . 
N 6 HOH C 13 126 57 HOH HOH . 
N 6 HOH C 14 127 60 HOH HOH . 
N 6 HOH C 15 128 62 HOH HOH . 
N 6 HOH C 16 129 67 HOH HOH . 
N 6 HOH C 17 130 68 HOH HOH . 
N 6 HOH C 18 131 72 HOH HOH . 
N 6 HOH C 19 132 73 HOH HOH . 
N 6 HOH C 20 133 88 HOH HOH . 
N 6 HOH C 21 134 89 HOH HOH . 
N 6 HOH C 22 135 95 HOH HOH . 
N 6 HOH C 23 136 100 HOH HOH . 
N 6 HOH C 24 137 102 HOH HOH . 
N 6 HOH C 25 138 104 HOH HOH . 
N 6 HOH C 26 139 108 HOH HOH . 
N 6 HOH C 27 140 111 HOH HOH . 
N 6 HOH C 28 141 112 HOH HOH . 
N 6 HOH C 29 142 116 HOH HOH . 
N 6 HOH C 30 143 119 HOH HOH . 
N 6 HOH C 31 144 128 HOH HOH . 
N 6 HOH C 32 145 131 HOH HOH . 
N 6 HOH C 33 146 135 HOH HOH . 
N 6 HOH C 34 147 137 HOH HOH . 
N 6 HOH C 35 148 143 HOH HOH . 
N 6 HOH C 36 149 145 HOH HOH . 
N 6 HOH C 37 150 157 HOH HOH . 
N 6 HOH C 38 151 162 HOH HOH . 
N 6 HOH C 39 152 164 HOH HOH . 
N 6 HOH C 40 153 165 HOH HOH . 
N 6 HOH C 41 154 167 HOH HOH . 
N 6 HOH C 42 155 171 HOH HOH . 
N 6 HOH C 43 156 183 HOH HOH . 
N 6 HOH C 44 157 185 HOH HOH . 
N 6 HOH C 45 158 187 HOH HOH . 
O 6 HOH D 1 116 6 HOH HOH . 
O 6 HOH D 2 117 8 HOH HOH . 
O 6 HOH D 3 118 14 HOH HOH . 
O 6 HOH D 4 119 15 HOH HOH . 
O 6 HOH D 5 120 18 HOH HOH . 
O 6 HOH D 6 121 19 HOH HOH . 
O 6 HOH D 7 122 25 HOH HOH . 
O 6 HOH D 8 123 27 HOH HOH . 
O 6 HOH D 9 124 28 HOH HOH . 
O 6 HOH D 10 125 29 HOH HOH . 
O 6 HOH D 11 126 30 HOH HOH . 
O 6 HOH D 12 127 35 HOH HOH . 
O 6 HOH D 13 128 38 HOH HOH . 
O 6 HOH D 14 129 42 HOH HOH . 
O 6 HOH D 15 130 43 HOH HOH . 
O 6 HOH D 16 131 61 HOH HOH . 
O 6 HOH D 17 132 63 HOH HOH . 
O 6 HOH D 18 133 66 HOH HOH . 
O 6 HOH D 19 134 70 HOH HOH . 
O 6 HOH D 20 135 71 HOH HOH . 
O 6 HOH D 21 136 78 HOH HOH . 
O 6 HOH D 22 137 83 HOH HOH . 
O 6 HOH D 23 138 86 HOH HOH . 
O 6 HOH D 24 139 91 HOH HOH . 
O 6 HOH D 25 140 92 HOH HOH . 
O 6 HOH D 26 141 94 HOH HOH . 
O 6 HOH D 27 142 97 HOH HOH . 
O 6 HOH D 28 143 101 HOH HOH . 
O 6 HOH D 29 144 109 HOH HOH . 
O 6 HOH D 30 145 110 HOH HOH . 
O 6 HOH D 31 146 117 HOH HOH . 
O 6 HOH D 32 147 120 HOH HOH . 
O 6 HOH D 33 148 122 HOH HOH . 
O 6 HOH D 34 149 129 HOH HOH . 
O 6 HOH D 35 150 132 HOH HOH . 
O 6 HOH D 36 151 133 HOH HOH . 
O 6 HOH D 37 152 148 HOH HOH . 
O 6 HOH D 38 153 161 HOH HOH . 
O 6 HOH D 39 154 173 HOH HOH . 
O 6 HOH D 40 155 176 HOH HOH . 
O 6 HOH D 41 156 179 HOH HOH . 
O 6 HOH D 42 157 182 HOH HOH . 
O 6 HOH D 43 158 184 HOH HOH . 
O 6 HOH D 44 159 192 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         I 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               27.143 
_atom_site.Cartn_y               -33.235 
_atom_site.Cartn_z               34.486 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        24.17 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           113 
_atom_site.auth_asym_id          C 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           339 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#