data_3DV4
#
_model_server_result.job_id            izEervKbxmJZVC6Y3C6tbg 
_model_server_result.datetime_utc      '2024-11-13 03:39:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3dv4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":115}' 
#
_entry.id    3DV4 
#
_exptl.entry_id    3DV4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3DV4 
_cell.length_a            72.51 
_cell.length_b            72.51 
_cell.length_c            85.91 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3DV4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 23 A CYS 23 1_555 A SG CYS 94 A CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? 
disulf ? disulf2 B SG CYS 22 B CYS 22 1_555 B SG CYS 98 B CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3DV4 
_atom_sites.fract_transf_matrix[1][1]    0.013791 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013791 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01164 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 MG A 1 115 115 MG MG . 
D 4 KDO B 1 114 114 KDO KDO . 
E 5 PG4 B 1 116 116 PG4 PG4 . 
F 6 HOH A 1 116 1 HOH HOH . 
F 6 HOH A 2 117 2 HOH HOH . 
F 6 HOH A 3 118 3 HOH HOH . 
F 6 HOH A 4 119 4 HOH HOH . 
F 6 HOH A 5 120 5 HOH HOH . 
F 6 HOH A 6 121 6 HOH HOH . 
F 6 HOH A 7 122 8 HOH HOH . 
F 6 HOH A 8 123 9 HOH HOH . 
F 6 HOH A 9 124 11 HOH HOH . 
F 6 HOH A 10 125 14 HOH HOH . 
F 6 HOH A 11 126 15 HOH HOH . 
F 6 HOH A 12 127 16 HOH HOH . 
F 6 HOH A 13 128 17 HOH HOH . 
F 6 HOH A 14 129 19 HOH HOH . 
F 6 HOH A 15 130 21 HOH HOH . 
F 6 HOH A 16 131 22 HOH HOH . 
F 6 HOH A 17 132 23 HOH HOH . 
F 6 HOH A 18 133 24 HOH HOH . 
F 6 HOH A 19 134 25 HOH HOH . 
F 6 HOH A 20 135 26 HOH HOH . 
F 6 HOH A 21 136 27 HOH HOH . 
F 6 HOH A 22 137 29 HOH HOH . 
F 6 HOH A 23 138 30 HOH HOH . 
F 6 HOH A 24 139 35 HOH HOH . 
F 6 HOH A 25 140 36 HOH HOH . 
F 6 HOH A 26 141 38 HOH HOH . 
F 6 HOH A 27 142 39 HOH HOH . 
F 6 HOH A 28 143 45 HOH HOH . 
F 6 HOH A 29 144 46 HOH HOH . 
F 6 HOH A 30 145 47 HOH HOH . 
F 6 HOH A 31 146 48 HOH HOH . 
F 6 HOH A 32 147 49 HOH HOH . 
F 6 HOH A 33 148 51 HOH HOH . 
F 6 HOH A 34 149 52 HOH HOH . 
F 6 HOH A 35 150 53 HOH HOH . 
F 6 HOH A 36 151 54 HOH HOH . 
F 6 HOH A 37 152 56 HOH HOH . 
F 6 HOH A 38 153 57 HOH HOH . 
F 6 HOH A 39 154 59 HOH HOH . 
F 6 HOH A 40 155 61 HOH HOH . 
F 6 HOH A 41 156 62 HOH HOH . 
F 6 HOH A 42 157 65 HOH HOH . 
F 6 HOH A 43 158 66 HOH HOH . 
F 6 HOH A 44 159 67 HOH HOH . 
F 6 HOH A 45 160 68 HOH HOH . 
F 6 HOH A 46 161 70 HOH HOH . 
F 6 HOH A 47 162 71 HOH HOH . 
F 6 HOH A 48 163 72 HOH HOH . 
F 6 HOH A 49 164 74 HOH HOH . 
F 6 HOH A 50 165 75 HOH HOH . 
F 6 HOH A 51 166 77 HOH HOH . 
F 6 HOH A 52 167 82 HOH HOH . 
F 6 HOH A 53 168 83 HOH HOH . 
F 6 HOH A 54 169 86 HOH HOH . 
F 6 HOH A 55 170 89 HOH HOH . 
F 6 HOH A 56 171 91 HOH HOH . 
F 6 HOH A 57 172 92 HOH HOH . 
F 6 HOH A 58 173 93 HOH HOH . 
F 6 HOH A 59 174 97 HOH HOH . 
F 6 HOH A 60 175 98 HOH HOH . 
F 6 HOH A 61 176 99 HOH HOH . 
F 6 HOH A 62 177 101 HOH HOH . 
F 6 HOH A 63 178 102 HOH HOH . 
F 6 HOH A 64 179 103 HOH HOH . 
F 6 HOH A 65 180 107 HOH HOH . 
F 6 HOH A 66 181 108 HOH HOH . 
F 6 HOH A 67 182 109 HOH HOH . 
F 6 HOH A 68 183 110 HOH HOH . 
F 6 HOH A 69 184 112 HOH HOH . 
F 6 HOH A 70 185 116 HOH HOH . 
F 6 HOH A 71 186 117 HOH HOH . 
F 6 HOH A 72 187 118 HOH HOH . 
F 6 HOH A 73 188 121 HOH HOH . 
F 6 HOH A 74 189 125 HOH HOH . 
F 6 HOH A 75 190 127 HOH HOH . 
G 6 HOH B 1 117 7 HOH HOH . 
G 6 HOH B 2 118 10 HOH HOH . 
G 6 HOH B 3 119 12 HOH HOH . 
G 6 HOH B 4 120 13 HOH HOH . 
G 6 HOH B 5 121 18 HOH HOH . 
G 6 HOH B 6 122 20 HOH HOH . 
G 6 HOH B 7 123 28 HOH HOH . 
G 6 HOH B 8 124 31 HOH HOH . 
G 6 HOH B 9 125 32 HOH HOH . 
G 6 HOH B 10 126 33 HOH HOH . 
G 6 HOH B 11 127 34 HOH HOH . 
G 6 HOH B 12 128 37 HOH HOH . 
G 6 HOH B 13 129 40 HOH HOH . 
G 6 HOH B 14 130 41 HOH HOH . 
G 6 HOH B 15 131 42 HOH HOH . 
G 6 HOH B 16 132 43 HOH HOH . 
G 6 HOH B 17 133 44 HOH HOH . 
G 6 HOH B 18 134 55 HOH HOH . 
G 6 HOH B 19 135 58 HOH HOH . 
G 6 HOH B 20 136 60 HOH HOH . 
G 6 HOH B 21 137 63 HOH HOH . 
G 6 HOH B 22 138 64 HOH HOH . 
G 6 HOH B 23 139 69 HOH HOH . 
G 6 HOH B 24 140 73 HOH HOH . 
G 6 HOH B 25 141 76 HOH HOH . 
G 6 HOH B 26 142 78 HOH HOH . 
G 6 HOH B 27 143 79 HOH HOH . 
G 6 HOH B 28 144 80 HOH HOH . 
G 6 HOH B 29 145 81 HOH HOH . 
G 6 HOH B 30 146 84 HOH HOH . 
G 6 HOH B 31 147 85 HOH HOH . 
G 6 HOH B 32 148 87 HOH HOH . 
G 6 HOH B 33 149 88 HOH HOH . 
G 6 HOH B 34 150 90 HOH HOH . 
G 6 HOH B 35 151 94 HOH HOH . 
G 6 HOH B 36 152 95 HOH HOH . 
G 6 HOH B 37 153 96 HOH HOH . 
G 6 HOH B 38 154 100 HOH HOH . 
G 6 HOH B 39 155 104 HOH HOH . 
G 6 HOH B 40 156 105 HOH HOH . 
G 6 HOH B 41 157 106 HOH HOH . 
G 6 HOH B 42 158 111 HOH HOH . 
G 6 HOH B 43 159 113 HOH HOH . 
G 6 HOH B 44 160 114 HOH HOH . 
G 6 HOH B 45 161 115 HOH HOH . 
G 6 HOH B 46 162 119 HOH HOH . 
G 6 HOH B 47 163 120 HOH HOH . 
G 6 HOH B 48 164 122 HOH HOH . 
G 6 HOH B 49 165 123 HOH HOH . 
G 6 HOH B 50 166 124 HOH HOH . 
G 6 HOH B 51 167 126 HOH HOH . 
G 6 HOH B 52 168 128 HOH HOH . 
G 6 HOH B 53 169 129 HOH HOH . 
G 6 HOH B 54 170 130 HOH HOH . 
G 6 HOH B 55 171 131 HOH HOH . 
G 6 HOH B 56 172 132 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               27.233 
_atom_site.Cartn_y               -4.654 
_atom_site.Cartn_z               2.079 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        37.83 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           115 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#