data_3DWB # _model_server_result.job_id QhaPmjUJcyfOMSnjT8fQ7Q _model_server_result.datetime_utc '2024-12-24 12:20:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3dwb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":771}' # _entry.id 3DWB # _exptl.entry_id 3DWB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3DWB _cell.length_a 120.88 _cell.length_b 120.88 _cell.length_c 192.346 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3DWB _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 122 1_555 A SG CYS 655 A CYS 755 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? disulf ? disulf2 A SG CYS 30 A CYS 130 1_555 A SG CYS 615 A CYS 715 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf3 A SG CYS 85 A CYS 185 1_555 A SG CYS 335 A CYS 435 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf4 A SG CYS 544 A CYS 644 1_555 A SG CYS 667 A CYS 767 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? metalc ? metalc1 A NE2 HIS 507 A HIS 607 1_555 B ZN ZN . A ZN 771 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? metalc ? metalc2 A NE2 HIS 511 A HIS 611 1_555 B ZN ZN . A ZN 771 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc3 B ZN ZN . A ZN 771 1_555 D O1P RDF . A RDF 817 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3DWB _atom_sites.fract_transf_matrix[1][1] 0.008273 _atom_sites.fract_transf_matrix[1][2] 0.004776 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009552 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005199 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 771 713 ZN ZN2 . C 3 5HD A 1 816 816 5HD C12 . D 4 RDF A 1 817 712 RDF B11 . E 5 HOH A 1 818 714 HOH HOH . E 5 HOH A 2 819 715 HOH HOH . E 5 HOH A 3 820 716 HOH HOH . E 5 HOH A 4 821 717 HOH HOH . E 5 HOH A 5 822 718 HOH HOH . E 5 HOH A 6 823 719 HOH HOH . E 5 HOH A 7 824 720 HOH HOH . E 5 HOH A 8 825 721 HOH HOH . E 5 HOH A 9 826 722 HOH HOH . E 5 HOH A 10 827 723 HOH HOH . E 5 HOH A 11 828 724 HOH HOH . E 5 HOH A 12 829 725 HOH HOH . E 5 HOH A 13 830 726 HOH HOH . E 5 HOH A 14 831 727 HOH HOH . E 5 HOH A 15 832 728 HOH HOH . E 5 HOH A 16 833 729 HOH HOH . E 5 HOH A 17 834 730 HOH HOH . E 5 HOH A 18 835 731 HOH HOH . E 5 HOH A 19 836 732 HOH HOH . E 5 HOH A 20 837 733 HOH HOH . E 5 HOH A 21 838 734 HOH HOH . E 5 HOH A 22 839 735 HOH HOH . E 5 HOH A 23 840 736 HOH HOH . E 5 HOH A 24 841 737 HOH HOH . E 5 HOH A 25 842 738 HOH HOH . E 5 HOH A 26 843 739 HOH HOH . E 5 HOH A 27 844 740 HOH HOH . E 5 HOH A 28 845 741 HOH HOH . E 5 HOH A 29 846 742 HOH HOH . E 5 HOH A 30 847 743 HOH HOH . E 5 HOH A 31 848 744 HOH HOH . E 5 HOH A 32 849 745 HOH HOH . E 5 HOH A 33 850 746 HOH HOH . E 5 HOH A 34 851 747 HOH HOH . E 5 HOH A 35 852 748 HOH HOH . E 5 HOH A 36 853 749 HOH HOH . E 5 HOH A 37 854 750 HOH HOH . E 5 HOH A 38 855 751 HOH HOH . E 5 HOH A 39 856 752 HOH HOH . E 5 HOH A 40 857 753 HOH HOH . E 5 HOH A 41 858 754 HOH HOH . E 5 HOH A 42 859 755 HOH HOH . E 5 HOH A 43 860 756 HOH HOH . E 5 HOH A 44 861 757 HOH HOH . E 5 HOH A 45 862 758 HOH HOH . E 5 HOH A 46 863 759 HOH HOH . E 5 HOH A 47 864 760 HOH HOH . E 5 HOH A 48 865 761 HOH HOH . E 5 HOH A 49 866 762 HOH HOH . E 5 HOH A 50 867 763 HOH HOH . E 5 HOH A 51 868 764 HOH HOH . E 5 HOH A 52 869 765 HOH HOH . E 5 HOH A 53 870 766 HOH HOH . E 5 HOH A 54 871 767 HOH HOH . E 5 HOH A 55 872 768 HOH HOH . E 5 HOH A 56 873 769 HOH HOH . E 5 HOH A 57 874 770 HOH HOH . E 5 HOH A 58 875 771 HOH HOH . E 5 HOH A 59 876 772 HOH HOH . E 5 HOH A 60 877 773 HOH HOH . E 5 HOH A 61 878 774 HOH HOH . E 5 HOH A 62 879 775 HOH HOH . E 5 HOH A 63 880 776 HOH HOH . E 5 HOH A 64 881 777 HOH HOH . E 5 HOH A 65 882 778 HOH HOH . E 5 HOH A 66 883 779 HOH HOH . E 5 HOH A 67 884 780 HOH HOH . E 5 HOH A 68 885 781 HOH HOH . E 5 HOH A 69 886 784 HOH HOH . E 5 HOH A 70 887 785 HOH HOH . E 5 HOH A 71 888 786 HOH HOH . E 5 HOH A 72 889 787 HOH HOH . E 5 HOH A 73 890 788 HOH HOH . E 5 HOH A 74 891 789 HOH HOH . E 5 HOH A 75 892 790 HOH HOH . E 5 HOH A 76 893 791 HOH HOH . E 5 HOH A 77 894 792 HOH HOH . E 5 HOH A 78 895 793 HOH HOH . E 5 HOH A 79 896 794 HOH HOH . E 5 HOH A 80 897 795 HOH HOH . E 5 HOH A 81 898 797 HOH HOH . E 5 HOH A 82 899 798 HOH HOH . E 5 HOH A 83 900 799 HOH HOH . E 5 HOH A 84 901 800 HOH HOH . E 5 HOH A 85 902 801 HOH HOH . E 5 HOH A 86 903 802 HOH HOH . E 5 HOH A 87 904 803 HOH HOH . E 5 HOH A 88 905 804 HOH HOH . E 5 HOH A 89 906 805 HOH HOH . E 5 HOH A 90 907 806 HOH HOH . E 5 HOH A 91 908 808 HOH HOH . E 5 HOH A 92 909 809 HOH HOH . E 5 HOH A 93 910 810 HOH HOH . E 5 HOH A 94 911 811 HOH HOH . E 5 HOH A 95 912 812 HOH HOH . E 5 HOH A 96 913 813 HOH HOH . E 5 HOH A 97 914 815 HOH HOH . E 5 HOH A 98 915 816 HOH HOH . E 5 HOH A 99 916 817 HOH HOH . E 5 HOH A 100 917 818 HOH HOH . E 5 HOH A 101 918 819 HOH HOH . E 5 HOH A 102 919 820 HOH HOH . E 5 HOH A 103 920 821 HOH HOH . E 5 HOH A 104 921 822 HOH HOH . E 5 HOH A 105 922 823 HOH HOH . E 5 HOH A 106 923 824 HOH HOH . E 5 HOH A 107 924 825 HOH HOH . E 5 HOH A 108 925 826 HOH HOH . E 5 HOH A 109 926 827 HOH HOH . E 5 HOH A 110 927 828 HOH HOH . E 5 HOH A 111 928 829 HOH HOH . E 5 HOH A 112 929 830 HOH HOH . E 5 HOH A 113 930 831 HOH HOH . E 5 HOH A 114 931 832 HOH HOH . E 5 HOH A 115 932 833 HOH HOH . E 5 HOH A 116 933 834 HOH HOH . E 5 HOH A 117 934 835 HOH HOH . E 5 HOH A 118 935 836 HOH HOH . E 5 HOH A 119 936 837 HOH HOH . E 5 HOH A 120 937 838 HOH HOH . E 5 HOH A 121 938 839 HOH HOH . E 5 HOH A 122 939 840 HOH HOH . E 5 HOH A 123 940 841 HOH HOH . E 5 HOH A 124 941 842 HOH HOH . E 5 HOH A 125 942 844 HOH HOH . E 5 HOH A 126 943 845 HOH HOH . E 5 HOH A 127 944 846 HOH HOH . E 5 HOH A 128 945 847 HOH HOH . E 5 HOH A 129 946 848 HOH HOH . E 5 HOH A 130 947 849 HOH HOH . E 5 HOH A 131 948 851 HOH HOH . E 5 HOH A 132 949 852 HOH HOH . E 5 HOH A 133 950 853 HOH HOH . E 5 HOH A 134 951 854 HOH HOH . E 5 HOH A 135 952 855 HOH HOH . E 5 HOH A 136 953 856 HOH HOH . E 5 HOH A 137 954 857 HOH HOH . E 5 HOH A 138 955 858 HOH HOH . E 5 HOH A 139 956 859 HOH HOH . E 5 HOH A 140 957 860 HOH HOH . E 5 HOH A 141 958 861 HOH HOH . E 5 HOH A 142 959 862 HOH HOH . E 5 HOH A 143 960 863 HOH HOH . E 5 HOH A 144 961 864 HOH HOH . E 5 HOH A 145 962 865 HOH HOH . E 5 HOH A 146 963 866 HOH HOH . E 5 HOH A 147 964 867 HOH HOH . E 5 HOH A 148 965 868 HOH HOH . E 5 HOH A 149 966 869 HOH HOH . E 5 HOH A 150 967 870 HOH HOH . E 5 HOH A 151 968 871 HOH HOH . E 5 HOH A 152 969 872 HOH HOH . E 5 HOH A 153 970 873 HOH HOH . E 5 HOH A 154 971 874 HOH HOH . E 5 HOH A 155 972 875 HOH HOH . E 5 HOH A 156 973 876 HOH HOH . E 5 HOH A 157 974 877 HOH HOH . E 5 HOH A 158 975 878 HOH HOH . E 5 HOH A 159 976 879 HOH HOH . E 5 HOH A 160 977 880 HOH HOH . E 5 HOH A 161 978 881 HOH HOH . E 5 HOH A 162 979 882 HOH HOH . E 5 HOH A 163 980 883 HOH HOH . E 5 HOH A 164 981 884 HOH HOH . E 5 HOH A 165 982 885 HOH HOH . E 5 HOH A 166 983 886 HOH HOH . E 5 HOH A 167 984 887 HOH HOH . E 5 HOH A 168 985 888 HOH HOH . E 5 HOH A 169 986 890 HOH HOH . E 5 HOH A 170 987 891 HOH HOH . E 5 HOH A 171 988 893 HOH HOH . E 5 HOH A 172 989 894 HOH HOH . E 5 HOH A 173 990 895 HOH HOH . E 5 HOH A 174 991 896 HOH HOH . E 5 HOH A 175 992 897 HOH HOH . E 5 HOH A 176 993 898 HOH HOH . E 5 HOH A 177 994 899 HOH HOH . E 5 HOH A 178 995 900 HOH HOH . E 5 HOH A 179 996 901 HOH HOH . E 5 HOH A 180 997 902 HOH HOH . E 5 HOH A 181 998 903 HOH HOH . E 5 HOH A 182 999 904 HOH HOH . E 5 HOH A 183 1000 905 HOH HOH . E 5 HOH A 184 1001 906 HOH HOH . E 5 HOH A 185 1002 907 HOH HOH . E 5 HOH A 186 1003 908 HOH HOH . E 5 HOH A 187 1004 909 HOH HOH . E 5 HOH A 188 1005 910 HOH HOH . E 5 HOH A 189 1006 911 HOH HOH . E 5 HOH A 190 1007 912 HOH HOH . E 5 HOH A 191 1008 913 HOH HOH . E 5 HOH A 192 1009 914 HOH HOH . E 5 HOH A 193 1010 915 HOH HOH . E 5 HOH A 194 1011 916 HOH HOH . E 5 HOH A 195 1012 917 HOH HOH . E 5 HOH A 196 1013 918 HOH HOH . E 5 HOH A 197 1014 919 HOH HOH . E 5 HOH A 198 1015 920 HOH HOH . E 5 HOH A 199 1016 921 HOH HOH . E 5 HOH A 200 1017 922 HOH HOH . E 5 HOH A 201 1018 923 HOH HOH . E 5 HOH A 202 1019 924 HOH HOH . E 5 HOH A 203 1020 925 HOH HOH . E 5 HOH A 204 1021 926 HOH HOH . E 5 HOH A 205 1022 927 HOH HOH . E 5 HOH A 206 1023 928 HOH HOH . E 5 HOH A 207 1024 929 HOH HOH . E 5 HOH A 208 1025 930 HOH HOH . E 5 HOH A 209 1026 931 HOH HOH . E 5 HOH A 210 1027 932 HOH HOH . E 5 HOH A 211 1028 933 HOH HOH . E 5 HOH A 212 1029 934 HOH HOH . E 5 HOH A 213 1030 935 HOH HOH . E 5 HOH A 214 1031 936 HOH HOH . E 5 HOH A 215 1032 937 HOH HOH . E 5 HOH A 216 1033 938 HOH HOH . E 5 HOH A 217 1034 939 HOH HOH . E 5 HOH A 218 1035 940 HOH HOH . E 5 HOH A 219 1036 941 HOH HOH . E 5 HOH A 220 1037 942 HOH HOH . E 5 HOH A 221 1038 943 HOH HOH . E 5 HOH A 222 1039 944 HOH HOH . E 5 HOH A 223 1040 945 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 82.358 _atom_site.Cartn_y 31.023 _atom_site.Cartn_z 36.512 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 41.13 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 771 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #