data_3DXM # _model_server_result.job_id aNcIGFO7mwh5RBS0uedahA _model_server_result.datetime_utc '2025-02-17 16:40:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3dxm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":419}' # _entry.id 3DXM # _exptl.entry_id 3DXM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 384.675 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S)-2-(3-bromophenyl)-3-(5-chloro-2-hydroxyphenyl)-1,3-thiazolidin-4-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3DXM _cell.length_a 111.383 _cell.length_b 129.651 _cell.length_c 203.787 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3DXM _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details heptameric _pdbx_struct_assembly.oligomeric_count 7 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 8 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C15 H11 Br Cl N O2 S' _chem_comp.formula_weight 384.675 _chem_comp.id N24 _chem_comp.mon_nstd_flag . _chem_comp.name (2S)-2-(3-bromophenyl)-3-(5-chloro-2-hydroxyphenyl)-1,3-thiazolidin-4-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAJ CAN N24 doub 237 n y CAJ CAF N24 sing 238 n y CAN BRAR N24 sing 239 n n CAN CAU N24 sing 240 n y CAU CAT N24 doub 241 n y CAT CAS N24 sing 242 n y CAS CAF N24 doub 243 n y CAF CAB N24 sing 244 n n CAB SAD N24 sing 245 n n CAB NAA N24 sing 246 n n SAD CAH N24 sing 247 n n CAH CAE N24 sing 248 n n CAE OAK N24 doub 249 n n CAE NAA N24 sing 250 n n NAA CAC N24 sing 251 n n CAC CAG N24 doub 252 n y CAC CAI N24 sing 253 n y CAG CAM N24 sing 254 n y CAM CAO N24 doub 255 n y CAM CL N24 sing 256 n n CAO CAL N24 sing 257 n y CAL CAI N24 doub 258 n y CAI OAQ N24 sing 259 n n CAJ HAJ N24 sing 260 n n CAU HAU N24 sing 261 n n CAT HAT N24 sing 262 n n CAS HAS N24 sing 263 n n CAB HAB N24 sing 264 n n CAH HAH N24 sing 265 n n CAH HAHA N24 sing 266 n n CAG HAG N24 sing 267 n n CAO HAO N24 sing 268 n n CAL HAL N24 sing 269 n n OAQ HOAQ N24 sing 270 n n # _atom_sites.entry_id 3DXM _atom_sites.fract_transf_matrix[1][1] 0.008978 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007713 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004907 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code H 8 N24 A 1 419 419 N24 N24 . I 9 HOH A 1 420 420 HOH HOH . I 9 HOH A 2 421 421 HOH HOH . I 9 HOH A 3 422 422 HOH HOH . I 9 HOH A 4 423 423 HOH HOH . I 9 HOH A 5 424 424 HOH HOH . I 9 HOH A 6 425 425 HOH HOH . I 9 HOH A 7 426 426 HOH HOH . I 9 HOH A 8 427 427 HOH HOH . I 9 HOH A 9 428 428 HOH HOH . I 9 HOH A 10 429 429 HOH HOH . I 9 HOH A 11 430 430 HOH HOH . J 9 HOH B 1 423 423 HOH HOH . J 9 HOH B 2 424 424 HOH HOH . K 9 HOH C 1 373 373 HOH HOH . K 9 HOH C 2 374 374 HOH HOH . K 9 HOH C 3 375 375 HOH HOH . K 9 HOH C 4 376 376 HOH HOH . K 9 HOH C 5 377 377 HOH HOH . K 9 HOH C 6 378 378 HOH HOH . K 9 HOH C 7 379 379 HOH HOH . K 9 HOH C 8 380 380 HOH HOH . K 9 HOH C 9 381 381 HOH HOH . K 9 HOH C 10 382 382 HOH HOH . K 9 HOH C 11 383 383 HOH HOH . K 9 HOH C 12 384 384 HOH HOH . K 9 HOH C 13 385 385 HOH HOH . K 9 HOH C 14 386 386 HOH HOH . L 9 HOH D 1 301 301 HOH HOH . L 9 HOH D 2 302 302 HOH HOH . L 9 HOH D 3 303 303 HOH HOH . L 9 HOH D 4 304 304 HOH HOH . L 9 HOH D 5 305 305 HOH HOH . L 9 HOH D 6 306 306 HOH HOH . L 9 HOH D 7 307 307 HOH HOH . L 9 HOH D 8 308 308 HOH HOH . L 9 HOH D 9 309 309 HOH HOH . M 9 HOH F 1 169 169 HOH HOH . M 9 HOH F 2 170 170 HOH HOH . M 9 HOH F 3 171 171 HOH HOH . M 9 HOH F 4 172 172 HOH HOH . M 9 HOH F 5 173 173 HOH HOH . M 9 HOH F 6 174 174 HOH HOH . M 9 HOH F 7 175 175 HOH HOH . M 9 HOH F 8 176 176 HOH HOH . M 9 HOH F 9 177 177 HOH HOH . M 9 HOH F 10 178 178 HOH HOH . N 9 HOH G 1 152 152 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAJ N24 . . . H 8 13.609 19.504 53.809 1 91.8 ? CAJ N24 419 A 1 HETATM 2 C CAN N24 . . . H 8 14.408 19.688 54.951 1 91.85 ? CAN N24 419 A 1 HETATM 3 BR BRAR N24 . . . H 8 13.616 19.604 56.688 1 90.07 ? BRAR N24 419 A 1 HETATM 4 C CAU N24 . . . H 8 15.776 19.945 54.787 1 91.18 ? CAU N24 419 A 1 HETATM 5 C CAT N24 . . . H 8 16.33 20.012 53.505 1 91.42 ? CAT N24 419 A 1 HETATM 6 C CAS N24 . . . H 8 15.533 19.822 52.377 1 92.16 ? CAS N24 419 A 1 HETATM 7 C CAF N24 . . . H 8 14.154 19.571 52.516 1 92.3 ? CAF N24 419 A 1 HETATM 8 C CAB N24 . . . H 8 13.29 19.38 51.292 1 91.77 ? CAB N24 419 A 1 HETATM 9 S SAD N24 . . . H 8 12.216 20.754 50.883 1 93.06 ? SAD N24 419 A 1 HETATM 10 C CAH N24 . . . H 8 10.691 19.882 51.03 1 89.9 ? CAH N24 419 A 1 HETATM 11 C CAE N24 . . . H 8 11.103 18.439 51.17 1 90.71 ? CAE N24 419 A 1 HETATM 12 O OAK N24 . . . H 8 10.254 17.57 51.064 1 91.14 ? OAK N24 419 A 1 HETATM 13 N NAA N24 . . . H 8 12.417 18.229 51.404 1 90.46 ? NAA N24 419 A 1 HETATM 14 C CAC N24 . . . H 8 12.938 16.974 51.479 1 89 ? CAC N24 419 A 1 HETATM 15 C CAG N24 . . . H 8 12.496 16.143 52.512 1 88.58 ? CAG N24 419 A 1 HETATM 16 C CAM N24 . . . H 8 12.956 14.841 52.64 1 88.17 ? CAM N24 419 A 1 HETATM 17 C CAO N24 . . . H 8 13.883 14.371 51.725 1 88.9 ? CAO N24 419 A 1 HETATM 18 C CAL N24 . . . H 8 14.34 15.196 50.689 1 88.76 ? CAL N24 419 A 1 HETATM 19 C CAI N24 . . . H 8 13.872 16.498 50.555 1 88.63 ? CAI N24 419 A 1 HETATM 20 O OAQ N24 . . . H 8 14.356 17.249 49.525 1 87.16 ? OAQ N24 419 A 1 HETATM 21 CL CL N24 . . . H 8 12.386 13.786 53.976 1 88.34 ? CL N24 419 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 21 #