data_3DXS
#
_model_server_result.job_id            AiKm9CR2Rzz-aUUM2OMMkw 
_model_server_result.datetime_utc      '2025-02-28 23:02:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3dxs 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":76}' 
#
_entry.id    3DXS 
#
_exptl.entry_id    3DXS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              6.941 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'LITHIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3DXS 
_cell.length_a            27.374 
_cell.length_b            44.529 
_cell.length_c            49.223 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3DXS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 13 X CYS 13 1_555 B ZN ZN . X ZN 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? 
metalc ? metalc2 A SG CYS 16 X CYS 16 1_555 B ZN ZN . X ZN 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? 
metalc ? metalc3 A OD1 ASN 40 X ASN 40 1_555 C LI LI . X LI 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? 
metalc ? metalc4 C LI LI . X LI 76 1_555 D O HOH . X HOH 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.906 ? 
metalc ? metalc5 C LI LI . X LI 76 1_555 D O HOH . X HOH 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.924 ? 
metalc ? metalc6 C LI LI . X LI 76 1_555 D O HOH . X HOH 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? 
#
_chem_comp.formula           'Li 1' 
_chem_comp.formula_weight    6.941 
_chem_comp.id                LI 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'LITHIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3DXS 
_atom_sites.fract_transf_matrix[1][1]    0.036531 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.022457 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.020316 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN X 1 75 1 ZN ZN . 
C 3 LI X 1 76 1 LI LI . 
D 4 HOH X 1 77 1 HOH HOH . 
D 4 HOH X 2 78 2 HOH HOH . 
D 4 HOH X 3 79 3 HOH HOH . 
D 4 HOH X 4 80 4 HOH HOH . 
D 4 HOH X 5 81 5 HOH HOH . 
D 4 HOH X 6 82 6 HOH HOH . 
D 4 HOH X 7 83 7 HOH HOH . 
D 4 HOH X 8 84 8 HOH HOH . 
D 4 HOH X 9 85 9 HOH HOH . 
D 4 HOH X 10 86 10 HOH HOH . 
D 4 HOH X 11 87 11 HOH HOH . 
D 4 HOH X 12 88 12 HOH HOH . 
D 4 HOH X 13 89 13 HOH HOH . 
D 4 HOH X 14 90 14 HOH HOH . 
D 4 HOH X 15 91 15 HOH HOH . 
D 4 HOH X 16 92 16 HOH HOH . 
D 4 HOH X 17 93 18 HOH HOH . 
D 4 HOH X 18 94 19 HOH HOH . 
D 4 HOH X 19 95 20 HOH HOH . 
D 4 HOH X 20 96 21 HOH HOH . 
D 4 HOH X 21 97 22 HOH HOH . 
D 4 HOH X 22 98 23 HOH HOH . 
D 4 HOH X 23 99 24 HOH HOH . 
D 4 HOH X 24 100 25 HOH HOH . 
D 4 HOH X 25 101 26 HOH HOH . 
D 4 HOH X 26 102 28 HOH HOH . 
D 4 HOH X 27 103 29 HOH HOH . 
D 4 HOH X 28 104 30 HOH HOH . 
D 4 HOH X 29 105 31 HOH HOH . 
D 4 HOH X 30 106 32 HOH HOH . 
D 4 HOH X 31 107 33 HOH HOH . 
D 4 HOH X 32 108 34 HOH HOH . 
D 4 HOH X 33 109 35 HOH HOH . 
D 4 HOH X 34 110 36 HOH HOH . 
D 4 HOH X 35 111 37 HOH HOH . 
D 4 HOH X 36 112 38 HOH HOH . 
D 4 HOH X 37 113 39 HOH HOH . 
D 4 HOH X 38 114 40 HOH HOH . 
D 4 HOH X 39 115 41 HOH HOH . 
D 4 HOH X 40 116 42 HOH HOH . 
D 4 HOH X 41 117 43 HOH HOH . 
D 4 HOH X 42 118 44 HOH HOH . 
D 4 HOH X 43 119 45 HOH HOH . 
D 4 HOH X 44 120 46 HOH HOH . 
D 4 HOH X 45 121 47 HOH HOH . 
D 4 HOH X 46 122 48 HOH HOH . 
D 4 HOH X 47 123 49 HOH HOH . 
D 4 HOH X 48 124 52 HOH HOH . 
D 4 HOH X 49 125 53 HOH HOH . 
D 4 HOH X 50 126 54 HOH HOH . 
D 4 HOH X 51 127 55 HOH HOH . 
D 4 HOH X 52 128 56 HOH HOH . 
D 4 HOH X 53 129 57 HOH HOH . 
D 4 HOH X 54 130 58 HOH HOH . 
D 4 HOH X 55 131 60 HOH HOH . 
D 4 HOH X 56 132 61 HOH HOH . 
D 4 HOH X 57 133 62 HOH HOH . 
D 4 HOH X 58 134 63 HOH HOH . 
D 4 HOH X 59 135 64 HOH HOH . 
D 4 HOH X 60 136 69 HOH HOH . 
D 4 HOH X 61 137 71 HOH HOH . 
D 4 HOH X 62 138 72 HOH HOH . 
D 4 HOH X 63 139 74 HOH HOH . 
D 4 HOH X 64 140 75 HOH HOH . 
D 4 HOH X 65 141 76 HOH HOH . 
D 4 HOH X 66 142 79 HOH HOH . 
D 4 HOH X 67 143 81 HOH HOH . 
D 4 HOH X 68 144 84 HOH HOH . 
D 4 HOH X 69 145 86 HOH HOH . 
D 4 HOH X 70 146 87 HOH HOH . 
D 4 HOH X 71 147 89 HOH HOH . 
D 4 HOH X 72 148 90 HOH HOH . 
D 4 HOH X 73 149 91 HOH HOH . 
D 4 HOH X 74 150 92 HOH HOH . 
D 4 HOH X 75 151 93 HOH HOH . 
D 4 HOH X 76 152 94 HOH HOH . 
D 4 HOH X 77 153 95 HOH HOH . 
D 4 HOH X 78 154 96 HOH HOH . 
D 4 HOH X 79 155 97 HOH HOH . 
D 4 HOH X 80 156 98 HOH HOH . 
D 4 HOH X 81 157 99 HOH HOH . 
D 4 HOH X 82 158 100 HOH HOH . 
D 4 HOH X 83 159 101 HOH HOH . 
D 4 HOH X 84 160 102 HOH HOH . 
D 4 HOH X 85 161 103 HOH HOH . 
D 4 HOH X 86 162 104 HOH HOH . 
D 4 HOH X 87 163 105 HOH HOH . 
D 4 HOH X 88 164 106 HOH HOH . 
D 4 HOH X 89 165 109 HOH HOH . 
D 4 HOH X 90 166 110 HOH HOH . 
D 4 HOH X 91 167 111 HOH HOH . 
D 4 HOH X 92 168 112 HOH HOH . 
D 4 HOH X 93 169 113 HOH HOH . 
D 4 HOH X 94 170 114 HOH HOH . 
D 4 HOH X 95 171 115 HOH HOH . 
D 4 HOH X 96 172 116 HOH HOH . 
D 4 HOH X 97 173 117 HOH HOH . 
D 4 HOH X 98 174 118 HOH HOH . 
D 4 HOH X 99 175 119 HOH HOH . 
D 4 HOH X 100 176 121 HOH HOH . 
D 4 HOH X 101 177 122 HOH HOH . 
D 4 HOH X 102 178 123 HOH HOH . 
D 4 HOH X 103 179 125 HOH HOH . 
D 4 HOH X 104 180 129 HOH HOH . 
D 4 HOH X 105 181 130 HOH HOH . 
D 4 HOH X 106 182 131 HOH HOH . 
D 4 HOH X 107 183 132 HOH HOH . 
D 4 HOH X 108 184 133 HOH HOH . 
D 4 HOH X 109 185 134 HOH HOH . 
D 4 HOH X 110 186 135 HOH HOH . 
D 4 HOH X 111 187 136 HOH HOH . 
D 4 HOH X 112 188 137 HOH HOH . 
D 4 HOH X 113 189 138 HOH HOH . 
D 4 HOH X 114 190 139 HOH HOH . 
D 4 HOH X 115 191 140 HOH HOH . 
D 4 HOH X 116 192 141 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           LI 
_atom_site.label_atom_id         LI 
_atom_site.label_comp_id         LI 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               21.128 
_atom_site.Cartn_y               35.21 
_atom_site.Cartn_z               26.875 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        12.82 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          LI 
_atom_site.auth_comp_id          LI 
_atom_site.auth_seq_id           76 
_atom_site.auth_asym_id          X 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           274 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#