data_3E0B # _model_server_result.job_id 9c3Xw-ImuHj7Xx5b5BY_yQ _model_server_result.datetime_utc '2024-11-05 12:24:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3e0b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":207}' # _entry.id 3E0B # _exptl.entry_id 3E0B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3E0B _cell.length_a 78.416 _cell.length_b 78.416 _cell.length_c 67.092 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3E0B _symmetry.cell_setting ? _symmetry.Int_Tables_number 77 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 281 n n PA O2A NDP sing 282 n n PA O5B NDP sing 283 n n PA O3 NDP sing 284 n n O2A HOA2 NDP sing 285 n n O5B C5B NDP sing 286 n n C5B C4B NDP sing 287 n n C5B H51A NDP sing 288 n n C5B H52A NDP sing 289 n n C4B O4B NDP sing 290 n n C4B C3B NDP sing 291 n n C4B H4B NDP sing 292 n n O4B C1B NDP sing 293 n n C3B O3B NDP sing 294 n n C3B C2B NDP sing 295 n n C3B H3B NDP sing 296 n n O3B HO3A NDP sing 297 n n C2B O2B NDP sing 298 n n C2B C1B NDP sing 299 n n C2B H2B NDP sing 300 n n O2B P2B NDP sing 301 n n C1B N9A NDP sing 302 n n C1B H1B NDP sing 303 n n N9A C8A NDP sing 304 n y N9A C4A NDP sing 305 n y C8A N7A NDP doub 306 n y C8A H8A NDP sing 307 n n N7A C5A NDP sing 308 n y C5A C6A NDP sing 309 n y C5A C4A NDP doub 310 n y C6A N6A NDP sing 311 n n C6A N1A NDP doub 312 n y N6A H61A NDP sing 313 n n N6A H62A NDP sing 314 n n N1A C2A NDP sing 315 n y C2A N3A NDP doub 316 n y C2A H2A NDP sing 317 n n N3A C4A NDP sing 318 n y O3 PN NDP sing 319 n n PN O1N NDP doub 320 n n PN O2N NDP sing 321 n n PN O5D NDP sing 322 n n O2N H21N NDP sing 323 n n O5D C5D NDP sing 324 n n C5D C4D NDP sing 325 n n C5D H51N NDP sing 326 n n C5D H52N NDP sing 327 n n C4D O4D NDP sing 328 n n C4D C3D NDP sing 329 n n C4D H4D NDP sing 330 n n O4D C1D NDP sing 331 n n C3D O3D NDP sing 332 n n C3D C2D NDP sing 333 n n C3D H3D NDP sing 334 n n O3D HO3N NDP sing 335 n n C2D O2D NDP sing 336 n n C2D C1D NDP sing 337 n n C2D H2D NDP sing 338 n n O2D HO2N NDP sing 339 n n C1D N1N NDP sing 340 n n C1D H1D NDP sing 341 n n N1N C2N NDP sing 342 n n N1N C6N NDP sing 343 n n C2N C3N NDP doub 344 n n C2N H2N NDP sing 345 n n C3N C7N NDP sing 346 n n C3N C4N NDP sing 347 n n C7N O7N NDP doub 348 n n C7N N7N NDP sing 349 n n N7N H71N NDP sing 350 n n N7N H72N NDP sing 351 n n C4N C5N NDP sing 352 n n C4N H41N NDP sing 353 n n C4N H42N NDP sing 354 n n C5N C6N NDP doub 355 n n C5N H5N NDP sing 356 n n C6N H6N NDP sing 357 n n P2B O1X NDP doub 358 n n P2B O2X NDP sing 359 n n P2B O3X NDP sing 360 n n O2X HOP2 NDP sing 361 n n O3X HOP3 NDP sing 362 n n # _atom_sites.entry_id 3E0B _atom_sites.fract_transf_matrix[1][1] 0.012752 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012752 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014905 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NDP A 1 207 207 NDP NAP . D 3 N22 A 1 208 208 N22 N22 . E 2 NDP B 1 207 207 NDP NAP . F 3 N22 B 1 208 208 N22 N22 . G 4 HOH A 1 209 209 HOH HOH . G 4 HOH A 2 210 210 HOH HOH . G 4 HOH A 3 211 211 HOH HOH . G 4 HOH A 4 212 212 HOH HOH . G 4 HOH A 5 213 213 HOH HOH . G 4 HOH A 6 214 214 HOH HOH . G 4 HOH A 7 215 215 HOH HOH . G 4 HOH A 8 216 216 HOH HOH . G 4 HOH A 9 217 217 HOH HOH . G 4 HOH A 10 218 218 HOH HOH . G 4 HOH A 11 219 219 HOH HOH . G 4 HOH A 12 220 220 HOH HOH . G 4 HOH A 13 221 221 HOH HOH . G 4 HOH A 14 222 222 HOH HOH . G 4 HOH A 15 223 223 HOH HOH . G 4 HOH A 16 224 224 HOH HOH . G 4 HOH A 17 225 225 HOH HOH . G 4 HOH A 18 226 226 HOH HOH . G 4 HOH A 19 227 227 HOH HOH . G 4 HOH A 20 228 228 HOH HOH . G 4 HOH A 21 229 229 HOH HOH . G 4 HOH A 22 230 230 HOH HOH . G 4 HOH A 23 231 231 HOH HOH . G 4 HOH A 24 232 232 HOH HOH . G 4 HOH A 25 233 233 HOH HOH . G 4 HOH A 26 234 234 HOH HOH . G 4 HOH A 27 235 235 HOH HOH . G 4 HOH A 28 236 236 HOH HOH . G 4 HOH A 29 237 237 HOH HOH . G 4 HOH A 30 238 238 HOH HOH . G 4 HOH A 31 239 239 HOH HOH . G 4 HOH A 32 240 240 HOH HOH . G 4 HOH A 33 241 241 HOH HOH . G 4 HOH A 34 242 242 HOH HOH . G 4 HOH A 35 243 243 HOH HOH . G 4 HOH A 36 244 244 HOH HOH . G 4 HOH A 37 245 245 HOH HOH . G 4 HOH A 38 246 246 HOH HOH . G 4 HOH A 39 247 247 HOH HOH . G 4 HOH A 40 248 248 HOH HOH . G 4 HOH A 41 249 249 HOH HOH . G 4 HOH A 42 250 250 HOH HOH . G 4 HOH A 43 251 251 HOH HOH . G 4 HOH A 44 252 252 HOH HOH . G 4 HOH A 45 253 253 HOH HOH . G 4 HOH A 46 254 254 HOH HOH . G 4 HOH A 47 255 255 HOH HOH . G 4 HOH A 48 256 256 HOH HOH . G 4 HOH A 49 257 257 HOH HOH . G 4 HOH A 50 258 258 HOH HOH . G 4 HOH A 51 259 259 HOH HOH . G 4 HOH A 52 260 260 HOH HOH . G 4 HOH A 53 261 261 HOH HOH . G 4 HOH A 54 262 262 HOH HOH . G 4 HOH A 55 263 263 HOH HOH . G 4 HOH A 56 264 264 HOH HOH . G 4 HOH A 57 265 265 HOH HOH . G 4 HOH A 58 266 266 HOH HOH . G 4 HOH A 59 267 267 HOH HOH . G 4 HOH A 60 268 268 HOH HOH . G 4 HOH A 61 269 269 HOH HOH . G 4 HOH A 62 271 271 HOH HOH . G 4 HOH A 63 272 272 HOH HOH . G 4 HOH A 64 273 273 HOH HOH . G 4 HOH A 65 274 274 HOH HOH . G 4 HOH A 66 275 275 HOH HOH . G 4 HOH A 67 276 276 HOH HOH . G 4 HOH A 68 277 277 HOH HOH . G 4 HOH A 69 278 278 HOH HOH . G 4 HOH A 70 279 279 HOH HOH . G 4 HOH A 71 280 280 HOH HOH . G 4 HOH A 72 281 281 HOH HOH . G 4 HOH A 73 282 282 HOH HOH . G 4 HOH A 74 283 283 HOH HOH . G 4 HOH A 75 284 284 HOH HOH . H 4 HOH B 1 209 209 HOH HOH . H 4 HOH B 2 210 210 HOH HOH . H 4 HOH B 3 211 211 HOH HOH . H 4 HOH B 4 212 212 HOH HOH . H 4 HOH B 5 213 213 HOH HOH . H 4 HOH B 6 214 214 HOH HOH . H 4 HOH B 7 215 215 HOH HOH . H 4 HOH B 8 216 216 HOH HOH . H 4 HOH B 9 217 217 HOH HOH . H 4 HOH B 10 218 218 HOH HOH . H 4 HOH B 11 219 219 HOH HOH . H 4 HOH B 12 220 220 HOH HOH . H 4 HOH B 13 221 221 HOH HOH . H 4 HOH B 14 222 222 HOH HOH . H 4 HOH B 15 223 223 HOH HOH . H 4 HOH B 16 224 224 HOH HOH . H 4 HOH B 17 225 225 HOH HOH . H 4 HOH B 18 226 226 HOH HOH . H 4 HOH B 19 227 227 HOH HOH . H 4 HOH B 20 228 228 HOH HOH . H 4 HOH B 21 229 229 HOH HOH . H 4 HOH B 22 230 230 HOH HOH . H 4 HOH B 23 231 231 HOH HOH . H 4 HOH B 24 232 232 HOH HOH . H 4 HOH B 25 233 233 HOH HOH . H 4 HOH B 26 234 234 HOH HOH . H 4 HOH B 27 235 235 HOH HOH . H 4 HOH B 28 236 236 HOH HOH . H 4 HOH B 29 237 237 HOH HOH . H 4 HOH B 30 238 238 HOH HOH . H 4 HOH B 31 239 239 HOH HOH . H 4 HOH B 32 240 240 HOH HOH . H 4 HOH B 33 241 241 HOH HOH . H 4 HOH B 34 242 242 HOH HOH . H 4 HOH B 35 243 243 HOH HOH . H 4 HOH B 36 244 244 HOH HOH . H 4 HOH B 37 245 245 HOH HOH . H 4 HOH B 38 246 246 HOH HOH . H 4 HOH B 39 247 247 HOH HOH . H 4 HOH B 40 248 248 HOH HOH . H 4 HOH B 41 249 249 HOH HOH . H 4 HOH B 42 250 250 HOH HOH . H 4 HOH B 43 251 251 HOH HOH . H 4 HOH B 44 252 252 HOH HOH . H 4 HOH B 45 253 253 HOH HOH . H 4 HOH B 46 254 254 HOH HOH . H 4 HOH B 47 255 255 HOH HOH . H 4 HOH B 48 256 256 HOH HOH . H 4 HOH B 49 257 257 HOH HOH . H 4 HOH B 50 258 258 HOH HOH . H 4 HOH B 51 259 259 HOH HOH . H 4 HOH B 52 260 260 HOH HOH . H 4 HOH B 53 261 261 HOH HOH . H 4 HOH B 54 262 262 HOH HOH . H 4 HOH B 55 263 263 HOH HOH . H 4 HOH B 56 264 264 HOH HOH . H 4 HOH B 57 265 265 HOH HOH . H 4 HOH B 58 266 266 HOH HOH . H 4 HOH B 59 267 267 HOH HOH . H 4 HOH B 60 268 268 HOH HOH . H 4 HOH B 61 269 269 HOH HOH . H 4 HOH B 62 270 270 HOH HOH . H 4 HOH B 63 271 271 HOH HOH . H 4 HOH B 64 272 272 HOH HOH . H 4 HOH B 65 273 273 HOH HOH . H 4 HOH B 66 274 274 HOH HOH . H 4 HOH B 67 275 275 HOH HOH . H 4 HOH B 68 276 276 HOH HOH . H 4 HOH B 69 277 277 HOH HOH . H 4 HOH B 70 278 278 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . . . E 2 36.653 33.633 -13.154 1 16.7 ? PA NDP 207 B 1 HETATM 2 O O1A NDP . . . E 2 35.717 33.909 -14.265 1 16.1 ? O1A NDP 207 B 1 HETATM 3 O O2A NDP . . . E 2 36.161 32.591 -12.243 1 18.37 ? O2A NDP 207 B 1 HETATM 4 O O5B NDP . . . E 2 38.112 33.274 -13.65 1 17.82 ? O5B NDP 207 B 1 HETATM 5 C C5B NDP . . . E 2 38.878 34.15 -14.425 1 15.36 ? C5B NDP 207 B 1 HETATM 6 C C4B NDP . . . E 2 40.002 33.264 -14.933 1 16.64 ? C4B NDP 207 B 1 HETATM 7 O O4B NDP . . . E 2 39.508 32.386 -15.918 1 18.71 ? O4B NDP 207 B 1 HETATM 8 C C3B NDP . . . E 2 41.144 34.011 -15.579 1 17.2 ? C3B NDP 207 B 1 HETATM 9 O O3B NDP . . . E 2 42.065 34.398 -14.598 1 19.13 ? O3B NDP 207 B 1 HETATM 10 C C2B NDP . . . E 2 41.701 32.966 -16.535 1 19.06 ? C2B NDP 207 B 1 HETATM 11 O O2B NDP . . . E 2 42.497 32.017 -15.878 1 17.95 ? O2B NDP 207 B 1 HETATM 12 C C1B NDP . . . E 2 40.465 32.199 -16.949 1 18.58 ? C1B NDP 207 B 1 HETATM 13 N N9A NDP . . . E 2 40.007 32.789 -18.216 1 18.56 ? N9A NDP 207 B 1 HETATM 14 C C8A NDP . . . E 2 39.284 33.944 -18.397 1 18.46 ? C8A NDP 207 B 1 HETATM 15 N N7A NDP . . . E 2 39.075 34.116 -19.725 1 16.75 ? N7A NDP 207 B 1 HETATM 16 C C5A NDP . . . E 2 39.716 33.101 -20.376 1 19.2 ? C5A NDP 207 B 1 HETATM 17 C C6A NDP . . . E 2 39.859 32.789 -21.734 1 20.15 ? C6A NDP 207 B 1 HETATM 18 N N6A NDP . . . E 2 39.32 33.589 -22.65 1 18.77 ? N6A NDP 207 B 1 HETATM 19 N N1A NDP . . . E 2 40.534 31.639 -22.113 1 19.66 ? N1A NDP 207 B 1 HETATM 20 C C2A NDP . . . E 2 41.061 30.806 -21.138 1 19.55 ? C2A NDP 207 B 1 HETATM 21 N N3A NDP . . . E 2 40.937 31.142 -19.795 1 15.1 ? N3A NDP 207 B 1 HETATM 22 C C4A NDP . . . E 2 40.283 32.262 -19.437 1 14.02 ? C4A NDP 207 B 1 HETATM 23 O O3 NDP . . . E 2 36.957 35.009 -12.39 1 17.59 ? O3 NDP 207 B 1 HETATM 24 P PN NDP . . . E 2 36.076 36.247 -11.931 1 18.75 ? PN NDP 207 B 1 HETATM 25 O O1N NDP . . . E 2 36.944 37.119 -11.132 1 20.78 ? O1N NDP 207 B 1 HETATM 26 O O2N NDP . . . E 2 35.396 36.823 -13.108 1 21.98 ? O2N NDP 207 B 1 HETATM 27 O O5D NDP . . . E 2 34.978 35.593 -10.948 1 18.68 ? O5D NDP 207 B 1 HETATM 28 C C5D NDP . . . E 2 35.309 35.153 -9.645 1 18.59 ? C5D NDP 207 B 1 HETATM 29 C C4D NDP . . . E 2 34.294 35.78 -8.673 1 17.55 ? C4D NDP 207 B 1 HETATM 30 O O4D NDP . . . E 2 32.977 35.431 -9.043 1 19.7 ? O4D NDP 207 B 1 HETATM 31 C C3D NDP . . . E 2 34.467 35.304 -7.245 1 19.1 ? C3D NDP 207 B 1 HETATM 32 O O3D NDP . . . E 2 34.192 36.397 -6.409 1 20.63 ? O3D NDP 207 B 1 HETATM 33 C C2D NDP . . . E 2 33.396 34.241 -7.078 1 20.15 ? C2D NDP 207 B 1 HETATM 34 O O2D NDP . . . E 2 32.993 34.098 -5.747 1 24.62 ? O2D NDP 207 B 1 HETATM 35 C C1D NDP . . . E 2 32.301 34.778 -7.966 1 17.59 ? C1D NDP 207 B 1 HETATM 36 N N1N NDP . . . E 2 31.376 33.741 -8.468 1 17.98 ? N1N NDP 207 B 1 HETATM 37 C C2N NDP . . . E 2 30.048 33.891 -8.181 1 18.7 ? C2N NDP 207 B 1 HETATM 38 C C3N NDP . . . E 2 29.114 32.971 -8.621 1 19.57 ? C3N NDP 207 B 1 HETATM 39 C C7N NDP . . . E 2 27.668 33.234 -8.333 1 14.76 ? C7N NDP 207 B 1 HETATM 40 O O7N NDP . . . E 2 26.697 32.683 -9.143 1 17.23 ? O7N NDP 207 B 1 HETATM 41 N N7N NDP . . . E 2 27.332 34.045 -7.36 1 12.94 ? N7N NDP 207 B 1 HETATM 42 C C4N NDP . . . E 2 29.528 31.879 -9.403 1 19.91 ? C4N NDP 207 B 1 HETATM 43 C C5N NDP . . . E 2 30.885 31.747 -9.731 1 20.34 ? C5N NDP 207 B 1 HETATM 44 C C6N NDP . . . E 2 31.799 32.701 -9.259 1 19.94 ? C6N NDP 207 B 1 HETATM 45 P P2B NDP . . . E 2 44.087 32.176 -15.733 1 19.11 ? P2B NDP 207 B 1 HETATM 46 O O1X NDP . . . E 2 44.384 33.4 -14.865 1 17.17 ? O1X NDP 207 B 1 HETATM 47 O O2X NDP . . . E 2 44.636 30.961 -15.046 1 18.65 ? O2X NDP 207 B 1 HETATM 48 O O3X NDP . . . E 2 44.663 32.352 -17.102 1 19.03 ? O3X NDP 207 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 343 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 48 #