data_3E0B
#
_model_server_result.job_id            8yo2DdSMVg5OD9VBpJzbgg 
_model_server_result.datetime_utc      '2024-11-27 21:17:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3e0b 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":208}' 
#
_entry.id    3E0B 
#
_exptl.entry_id    3E0B 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              312.366 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            5-[3-(2,5-dimethoxyphenyl)prop-1-yn-1-yl]-6-ethylpyrimidine-2,4-diamine 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3E0B 
_cell.length_a            78.416 
_cell.length_b            78.416 
_cell.length_c            67.092 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3E0B 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        77 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 42' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
_chem_comp.formula           'C17 H20 N4 O2' 
_chem_comp.formula_weight    312.366 
_chem_comp.id                N22 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              5-[3-(2,5-dimethoxyphenyl)prop-1-yn-1-yl]-6-ethylpyrimidine-2,4-diamine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C8 C7 N22 sing 237 n n 
C7 C5 N22 sing 238 n n 
C5 N4 N22 doub 239 n y 
C5 C6 N22 sing 240 n y 
N4 C3 N22 sing 241 n y 
C3 N8 N22 sing 242 n n 
C3 N2 N22 doub 243 n y 
N2 C1 N22 sing 244 n y 
C1 N7 N22 sing 245 n n 
C1 C6 N22 doub 246 n y 
C6 C9 N22 sing 247 n n 
C9 C10 N22 trip 248 n n 
C10 C11 N22 sing 249 n n 
C11 C13 N22 sing 250 n n 
C13 C18 N22 doub 251 n y 
C13 C14 N22 sing 252 n y 
C18 C17 N22 sing 253 n y 
C17 O2 N22 sing 254 n n 
C17 C16 N22 doub 255 n y 
O2 C4 N22 sing 256 n n 
C16 C15 N22 sing 257 n y 
C15 C14 N22 doub 258 n y 
C14 O10 N22 sing 259 n n 
O10 C2 N22 sing 260 n n 
C8 H8 N22 sing 261 n n 
C8 H8A N22 sing 262 n n 
C8 H8B N22 sing 263 n n 
C7 H7 N22 sing 264 n n 
C7 H7A N22 sing 265 n n 
N8 HN8 N22 sing 266 n n 
N8 HN8A N22 sing 267 n n 
N7 HN7 N22 sing 268 n n 
N7 HN7A N22 sing 269 n n 
C11 H11 N22 sing 270 n n 
C11 H11A N22 sing 271 n n 
C18 H18 N22 sing 272 n n 
C4 H4 N22 sing 273 n n 
C4 H4A N22 sing 274 n n 
C4 H4B N22 sing 275 n n 
C16 H16 N22 sing 276 n n 
C15 H15 N22 sing 277 n n 
C2 H2 N22 sing 278 n n 
C2 H2A N22 sing 279 n n 
C2 H2B N22 sing 280 n n 
#
_atom_sites.entry_id                     3E0B 
_atom_sites.fract_transf_matrix[1][1]    0.012752 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012752 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014905 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NDP A 1 207 207 NDP NAP . 
D 3 N22 A 1 208 208 N22 N22 . 
E 2 NDP B 1 207 207 NDP NAP . 
F 3 N22 B 1 208 208 N22 N22 . 
G 4 HOH A 1 209 209 HOH HOH . 
G 4 HOH A 2 210 210 HOH HOH . 
G 4 HOH A 3 211 211 HOH HOH . 
G 4 HOH A 4 212 212 HOH HOH . 
G 4 HOH A 5 213 213 HOH HOH . 
G 4 HOH A 6 214 214 HOH HOH . 
G 4 HOH A 7 215 215 HOH HOH . 
G 4 HOH A 8 216 216 HOH HOH . 
G 4 HOH A 9 217 217 HOH HOH . 
G 4 HOH A 10 218 218 HOH HOH . 
G 4 HOH A 11 219 219 HOH HOH . 
G 4 HOH A 12 220 220 HOH HOH . 
G 4 HOH A 13 221 221 HOH HOH . 
G 4 HOH A 14 222 222 HOH HOH . 
G 4 HOH A 15 223 223 HOH HOH . 
G 4 HOH A 16 224 224 HOH HOH . 
G 4 HOH A 17 225 225 HOH HOH . 
G 4 HOH A 18 226 226 HOH HOH . 
G 4 HOH A 19 227 227 HOH HOH . 
G 4 HOH A 20 228 228 HOH HOH . 
G 4 HOH A 21 229 229 HOH HOH . 
G 4 HOH A 22 230 230 HOH HOH . 
G 4 HOH A 23 231 231 HOH HOH . 
G 4 HOH A 24 232 232 HOH HOH . 
G 4 HOH A 25 233 233 HOH HOH . 
G 4 HOH A 26 234 234 HOH HOH . 
G 4 HOH A 27 235 235 HOH HOH . 
G 4 HOH A 28 236 236 HOH HOH . 
G 4 HOH A 29 237 237 HOH HOH . 
G 4 HOH A 30 238 238 HOH HOH . 
G 4 HOH A 31 239 239 HOH HOH . 
G 4 HOH A 32 240 240 HOH HOH . 
G 4 HOH A 33 241 241 HOH HOH . 
G 4 HOH A 34 242 242 HOH HOH . 
G 4 HOH A 35 243 243 HOH HOH . 
G 4 HOH A 36 244 244 HOH HOH . 
G 4 HOH A 37 245 245 HOH HOH . 
G 4 HOH A 38 246 246 HOH HOH . 
G 4 HOH A 39 247 247 HOH HOH . 
G 4 HOH A 40 248 248 HOH HOH . 
G 4 HOH A 41 249 249 HOH HOH . 
G 4 HOH A 42 250 250 HOH HOH . 
G 4 HOH A 43 251 251 HOH HOH . 
G 4 HOH A 44 252 252 HOH HOH . 
G 4 HOH A 45 253 253 HOH HOH . 
G 4 HOH A 46 254 254 HOH HOH . 
G 4 HOH A 47 255 255 HOH HOH . 
G 4 HOH A 48 256 256 HOH HOH . 
G 4 HOH A 49 257 257 HOH HOH . 
G 4 HOH A 50 258 258 HOH HOH . 
G 4 HOH A 51 259 259 HOH HOH . 
G 4 HOH A 52 260 260 HOH HOH . 
G 4 HOH A 53 261 261 HOH HOH . 
G 4 HOH A 54 262 262 HOH HOH . 
G 4 HOH A 55 263 263 HOH HOH . 
G 4 HOH A 56 264 264 HOH HOH . 
G 4 HOH A 57 265 265 HOH HOH . 
G 4 HOH A 58 266 266 HOH HOH . 
G 4 HOH A 59 267 267 HOH HOH . 
G 4 HOH A 60 268 268 HOH HOH . 
G 4 HOH A 61 269 269 HOH HOH . 
G 4 HOH A 62 271 271 HOH HOH . 
G 4 HOH A 63 272 272 HOH HOH . 
G 4 HOH A 64 273 273 HOH HOH . 
G 4 HOH A 65 274 274 HOH HOH . 
G 4 HOH A 66 275 275 HOH HOH . 
G 4 HOH A 67 276 276 HOH HOH . 
G 4 HOH A 68 277 277 HOH HOH . 
G 4 HOH A 69 278 278 HOH HOH . 
G 4 HOH A 70 279 279 HOH HOH . 
G 4 HOH A 71 280 280 HOH HOH . 
G 4 HOH A 72 281 281 HOH HOH . 
G 4 HOH A 73 282 282 HOH HOH . 
G 4 HOH A 74 283 283 HOH HOH . 
G 4 HOH A 75 284 284 HOH HOH . 
H 4 HOH B 1 209 209 HOH HOH . 
H 4 HOH B 2 210 210 HOH HOH . 
H 4 HOH B 3 211 211 HOH HOH . 
H 4 HOH B 4 212 212 HOH HOH . 
H 4 HOH B 5 213 213 HOH HOH . 
H 4 HOH B 6 214 214 HOH HOH . 
H 4 HOH B 7 215 215 HOH HOH . 
H 4 HOH B 8 216 216 HOH HOH . 
H 4 HOH B 9 217 217 HOH HOH . 
H 4 HOH B 10 218 218 HOH HOH . 
H 4 HOH B 11 219 219 HOH HOH . 
H 4 HOH B 12 220 220 HOH HOH . 
H 4 HOH B 13 221 221 HOH HOH . 
H 4 HOH B 14 222 222 HOH HOH . 
H 4 HOH B 15 223 223 HOH HOH . 
H 4 HOH B 16 224 224 HOH HOH . 
H 4 HOH B 17 225 225 HOH HOH . 
H 4 HOH B 18 226 226 HOH HOH . 
H 4 HOH B 19 227 227 HOH HOH . 
H 4 HOH B 20 228 228 HOH HOH . 
H 4 HOH B 21 229 229 HOH HOH . 
H 4 HOH B 22 230 230 HOH HOH . 
H 4 HOH B 23 231 231 HOH HOH . 
H 4 HOH B 24 232 232 HOH HOH . 
H 4 HOH B 25 233 233 HOH HOH . 
H 4 HOH B 26 234 234 HOH HOH . 
H 4 HOH B 27 235 235 HOH HOH . 
H 4 HOH B 28 236 236 HOH HOH . 
H 4 HOH B 29 237 237 HOH HOH . 
H 4 HOH B 30 238 238 HOH HOH . 
H 4 HOH B 31 239 239 HOH HOH . 
H 4 HOH B 32 240 240 HOH HOH . 
H 4 HOH B 33 241 241 HOH HOH . 
H 4 HOH B 34 242 242 HOH HOH . 
H 4 HOH B 35 243 243 HOH HOH . 
H 4 HOH B 36 244 244 HOH HOH . 
H 4 HOH B 37 245 245 HOH HOH . 
H 4 HOH B 38 246 246 HOH HOH . 
H 4 HOH B 39 247 247 HOH HOH . 
H 4 HOH B 40 248 248 HOH HOH . 
H 4 HOH B 41 249 249 HOH HOH . 
H 4 HOH B 42 250 250 HOH HOH . 
H 4 HOH B 43 251 251 HOH HOH . 
H 4 HOH B 44 252 252 HOH HOH . 
H 4 HOH B 45 253 253 HOH HOH . 
H 4 HOH B 46 254 254 HOH HOH . 
H 4 HOH B 47 255 255 HOH HOH . 
H 4 HOH B 48 256 256 HOH HOH . 
H 4 HOH B 49 257 257 HOH HOH . 
H 4 HOH B 50 258 258 HOH HOH . 
H 4 HOH B 51 259 259 HOH HOH . 
H 4 HOH B 52 260 260 HOH HOH . 
H 4 HOH B 53 261 261 HOH HOH . 
H 4 HOH B 54 262 262 HOH HOH . 
H 4 HOH B 55 263 263 HOH HOH . 
H 4 HOH B 56 264 264 HOH HOH . 
H 4 HOH B 57 265 265 HOH HOH . 
H 4 HOH B 58 266 266 HOH HOH . 
H 4 HOH B 59 267 267 HOH HOH . 
H 4 HOH B 60 268 268 HOH HOH . 
H 4 HOH B 61 269 269 HOH HOH . 
H 4 HOH B 62 270 270 HOH HOH . 
H 4 HOH B 63 271 271 HOH HOH . 
H 4 HOH B 64 272 272 HOH HOH . 
H 4 HOH B 65 273 273 HOH HOH . 
H 4 HOH B 66 274 274 HOH HOH . 
H 4 HOH B 67 275 275 HOH HOH . 
H 4 HOH B 68 276 276 HOH HOH . 
H 4 HOH B 69 277 277 HOH HOH . 
H 4 HOH B 70 278 278 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C8 N22 . . . D 3 -2.382 15.126 5.025 1 23.8 ? C8 N22 208 A 1 
HETATM 2 C C7 N22 . . . D 3 -3.677 15.743 4.58 1 20.64 ? C7 N22 208 A 1 
HETATM 3 C C5 N22 . . . D 3 -3.578 16.1 3.091 1 20.85 ? C5 N22 208 A 1 
HETATM 4 N N4 N22 . . . D 3 -3.036 17.279 2.768 1 19.43 ? N4 N22 208 A 1 
HETATM 5 C C3 N22 . . . D 3 -2.948 17.696 1.491 1 19.4 ? C3 N22 208 A 1 
HETATM 6 N N8 N22 . . . D 3 -2.39 18.898 1.238 1 19.98 ? N8 N22 208 A 1 
HETATM 7 N N2 N22 . . . D 3 -3.398 16.924 0.488 1 17.48 ? N2 N22 208 A 1 
HETATM 8 C C1 N22 . . . D 3 -3.94 15.718 0.738 1 19.83 ? C1 N22 208 A 1 
HETATM 9 N N7 N22 . . . D 3 -4.406 14.97 -0.26 1 19.26 ? N7 N22 208 A 1 
HETATM 10 C C6 N22 . . . D 3 -4.06 15.283 2.067 1 20.69 ? C6 N22 208 A 1 
HETATM 11 C C9 N22 . . . D 3 -4.65 14.003 2.414 1 21.02 ? C9 N22 208 A 1 
HETATM 12 C C10 N22 . . . D 3 -5.164 12.918 2.811 1 21.16 ? C10 N22 208 A 1 
HETATM 13 C C11 N22 . . . D 3 -5.703 11.645 3.331 1 21.67 ? C11 N22 208 A 1 
HETATM 14 C C13 N22 . . . D 3 -6.708 11.844 4.484 1 26.47 ? C13 N22 208 A 1 
HETATM 15 C C18 N22 . . . D 3 -7.631 12.911 4.419 1 25.75 ? C18 N22 208 A 1 
HETATM 16 C C17 N22 . . . D 3 -8.582 13.112 5.436 1 28.67 ? C17 N22 208 A 1 
HETATM 17 O O2 N22 . . . D 3 -9.504 14.152 5.413 1 30.1 ? O2 N22 208 A 1 
HETATM 18 C C4 N22 . . . D 3 -9.408 14.979 4.254 1 32.57 ? C4 N22 208 A 1 
HETATM 19 C C16 N22 . . . D 3 -8.619 12.232 6.512 1 25.36 ? C16 N22 208 A 1 
HETATM 20 C C15 N22 . . . D 3 -7.722 11.164 6.574 1 29.47 ? C15 N22 208 A 1 
HETATM 21 C C14 N22 . . . D 3 -6.779 10.952 5.563 1 28.54 ? C14 N22 208 A 1 
HETATM 22 O O10 N22 . . . D 3 -5.899 9.882 5.606 1 29.58 ? O10 N22 208 A 1 
HETATM 23 C C2 N22 . . . D 3 -6.141 8.922 6.637 1 30.29 ? C2 N22 208 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           263 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           23 
#