data_3E0B # _model_server_result.job_id O60nBOGTu3x7gdGsWVQ_Xg _model_server_result.datetime_utc '2024-11-05 12:47:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3e0b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":208}' # _entry.id 3E0B # _exptl.entry_id 3E0B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 312.366 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-[3-(2,5-dimethoxyphenyl)prop-1-yn-1-yl]-6-ethylpyrimidine-2,4-diamine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3E0B _cell.length_a 78.416 _cell.length_b 78.416 _cell.length_c 67.092 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3E0B _symmetry.cell_setting ? _symmetry.Int_Tables_number 77 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C17 H20 N4 O2' _chem_comp.formula_weight 312.366 _chem_comp.id N22 _chem_comp.mon_nstd_flag . _chem_comp.name 5-[3-(2,5-dimethoxyphenyl)prop-1-yn-1-yl]-6-ethylpyrimidine-2,4-diamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C8 C7 N22 sing 237 n n C7 C5 N22 sing 238 n n C5 N4 N22 doub 239 n y C5 C6 N22 sing 240 n y N4 C3 N22 sing 241 n y C3 N8 N22 sing 242 n n C3 N2 N22 doub 243 n y N2 C1 N22 sing 244 n y C1 N7 N22 sing 245 n n C1 C6 N22 doub 246 n y C6 C9 N22 sing 247 n n C9 C10 N22 trip 248 n n C10 C11 N22 sing 249 n n C11 C13 N22 sing 250 n n C13 C18 N22 doub 251 n y C13 C14 N22 sing 252 n y C18 C17 N22 sing 253 n y C17 O2 N22 sing 254 n n C17 C16 N22 doub 255 n y O2 C4 N22 sing 256 n n C16 C15 N22 sing 257 n y C15 C14 N22 doub 258 n y C14 O10 N22 sing 259 n n O10 C2 N22 sing 260 n n C8 H8 N22 sing 261 n n C8 H8A N22 sing 262 n n C8 H8B N22 sing 263 n n C7 H7 N22 sing 264 n n C7 H7A N22 sing 265 n n N8 HN8 N22 sing 266 n n N8 HN8A N22 sing 267 n n N7 HN7 N22 sing 268 n n N7 HN7A N22 sing 269 n n C11 H11 N22 sing 270 n n C11 H11A N22 sing 271 n n C18 H18 N22 sing 272 n n C4 H4 N22 sing 273 n n C4 H4A N22 sing 274 n n C4 H4B N22 sing 275 n n C16 H16 N22 sing 276 n n C15 H15 N22 sing 277 n n C2 H2 N22 sing 278 n n C2 H2A N22 sing 279 n n C2 H2B N22 sing 280 n n # _atom_sites.entry_id 3E0B _atom_sites.fract_transf_matrix[1][1] 0.012752 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012752 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014905 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NDP A 1 207 207 NDP NAP . D 3 N22 A 1 208 208 N22 N22 . E 2 NDP B 1 207 207 NDP NAP . F 3 N22 B 1 208 208 N22 N22 . G 4 HOH A 1 209 209 HOH HOH . G 4 HOH A 2 210 210 HOH HOH . G 4 HOH A 3 211 211 HOH HOH . G 4 HOH A 4 212 212 HOH HOH . G 4 HOH A 5 213 213 HOH HOH . G 4 HOH A 6 214 214 HOH HOH . G 4 HOH A 7 215 215 HOH HOH . G 4 HOH A 8 216 216 HOH HOH . G 4 HOH A 9 217 217 HOH HOH . G 4 HOH A 10 218 218 HOH HOH . G 4 HOH A 11 219 219 HOH HOH . G 4 HOH A 12 220 220 HOH HOH . G 4 HOH A 13 221 221 HOH HOH . G 4 HOH A 14 222 222 HOH HOH . G 4 HOH A 15 223 223 HOH HOH . G 4 HOH A 16 224 224 HOH HOH . G 4 HOH A 17 225 225 HOH HOH . G 4 HOH A 18 226 226 HOH HOH . G 4 HOH A 19 227 227 HOH HOH . G 4 HOH A 20 228 228 HOH HOH . G 4 HOH A 21 229 229 HOH HOH . G 4 HOH A 22 230 230 HOH HOH . G 4 HOH A 23 231 231 HOH HOH . G 4 HOH A 24 232 232 HOH HOH . G 4 HOH A 25 233 233 HOH HOH . G 4 HOH A 26 234 234 HOH HOH . G 4 HOH A 27 235 235 HOH HOH . G 4 HOH A 28 236 236 HOH HOH . G 4 HOH A 29 237 237 HOH HOH . G 4 HOH A 30 238 238 HOH HOH . G 4 HOH A 31 239 239 HOH HOH . G 4 HOH A 32 240 240 HOH HOH . G 4 HOH A 33 241 241 HOH HOH . G 4 HOH A 34 242 242 HOH HOH . G 4 HOH A 35 243 243 HOH HOH . G 4 HOH A 36 244 244 HOH HOH . G 4 HOH A 37 245 245 HOH HOH . G 4 HOH A 38 246 246 HOH HOH . G 4 HOH A 39 247 247 HOH HOH . G 4 HOH A 40 248 248 HOH HOH . G 4 HOH A 41 249 249 HOH HOH . G 4 HOH A 42 250 250 HOH HOH . G 4 HOH A 43 251 251 HOH HOH . G 4 HOH A 44 252 252 HOH HOH . G 4 HOH A 45 253 253 HOH HOH . G 4 HOH A 46 254 254 HOH HOH . G 4 HOH A 47 255 255 HOH HOH . G 4 HOH A 48 256 256 HOH HOH . G 4 HOH A 49 257 257 HOH HOH . G 4 HOH A 50 258 258 HOH HOH . G 4 HOH A 51 259 259 HOH HOH . G 4 HOH A 52 260 260 HOH HOH . G 4 HOH A 53 261 261 HOH HOH . G 4 HOH A 54 262 262 HOH HOH . G 4 HOH A 55 263 263 HOH HOH . G 4 HOH A 56 264 264 HOH HOH . G 4 HOH A 57 265 265 HOH HOH . G 4 HOH A 58 266 266 HOH HOH . G 4 HOH A 59 267 267 HOH HOH . G 4 HOH A 60 268 268 HOH HOH . G 4 HOH A 61 269 269 HOH HOH . G 4 HOH A 62 271 271 HOH HOH . G 4 HOH A 63 272 272 HOH HOH . G 4 HOH A 64 273 273 HOH HOH . G 4 HOH A 65 274 274 HOH HOH . G 4 HOH A 66 275 275 HOH HOH . G 4 HOH A 67 276 276 HOH HOH . G 4 HOH A 68 277 277 HOH HOH . G 4 HOH A 69 278 278 HOH HOH . G 4 HOH A 70 279 279 HOH HOH . G 4 HOH A 71 280 280 HOH HOH . G 4 HOH A 72 281 281 HOH HOH . G 4 HOH A 73 282 282 HOH HOH . G 4 HOH A 74 283 283 HOH HOH . G 4 HOH A 75 284 284 HOH HOH . H 4 HOH B 1 209 209 HOH HOH . H 4 HOH B 2 210 210 HOH HOH . H 4 HOH B 3 211 211 HOH HOH . H 4 HOH B 4 212 212 HOH HOH . H 4 HOH B 5 213 213 HOH HOH . H 4 HOH B 6 214 214 HOH HOH . H 4 HOH B 7 215 215 HOH HOH . H 4 HOH B 8 216 216 HOH HOH . H 4 HOH B 9 217 217 HOH HOH . H 4 HOH B 10 218 218 HOH HOH . H 4 HOH B 11 219 219 HOH HOH . H 4 HOH B 12 220 220 HOH HOH . H 4 HOH B 13 221 221 HOH HOH . H 4 HOH B 14 222 222 HOH HOH . H 4 HOH B 15 223 223 HOH HOH . H 4 HOH B 16 224 224 HOH HOH . H 4 HOH B 17 225 225 HOH HOH . H 4 HOH B 18 226 226 HOH HOH . H 4 HOH B 19 227 227 HOH HOH . H 4 HOH B 20 228 228 HOH HOH . H 4 HOH B 21 229 229 HOH HOH . H 4 HOH B 22 230 230 HOH HOH . H 4 HOH B 23 231 231 HOH HOH . H 4 HOH B 24 232 232 HOH HOH . H 4 HOH B 25 233 233 HOH HOH . H 4 HOH B 26 234 234 HOH HOH . H 4 HOH B 27 235 235 HOH HOH . H 4 HOH B 28 236 236 HOH HOH . H 4 HOH B 29 237 237 HOH HOH . H 4 HOH B 30 238 238 HOH HOH . H 4 HOH B 31 239 239 HOH HOH . H 4 HOH B 32 240 240 HOH HOH . H 4 HOH B 33 241 241 HOH HOH . H 4 HOH B 34 242 242 HOH HOH . H 4 HOH B 35 243 243 HOH HOH . H 4 HOH B 36 244 244 HOH HOH . H 4 HOH B 37 245 245 HOH HOH . H 4 HOH B 38 246 246 HOH HOH . H 4 HOH B 39 247 247 HOH HOH . H 4 HOH B 40 248 248 HOH HOH . H 4 HOH B 41 249 249 HOH HOH . H 4 HOH B 42 250 250 HOH HOH . H 4 HOH B 43 251 251 HOH HOH . H 4 HOH B 44 252 252 HOH HOH . H 4 HOH B 45 253 253 HOH HOH . H 4 HOH B 46 254 254 HOH HOH . H 4 HOH B 47 255 255 HOH HOH . H 4 HOH B 48 256 256 HOH HOH . H 4 HOH B 49 257 257 HOH HOH . H 4 HOH B 50 258 258 HOH HOH . H 4 HOH B 51 259 259 HOH HOH . H 4 HOH B 52 260 260 HOH HOH . H 4 HOH B 53 261 261 HOH HOH . H 4 HOH B 54 262 262 HOH HOH . H 4 HOH B 55 263 263 HOH HOH . H 4 HOH B 56 264 264 HOH HOH . H 4 HOH B 57 265 265 HOH HOH . H 4 HOH B 58 266 266 HOH HOH . H 4 HOH B 59 267 267 HOH HOH . H 4 HOH B 60 268 268 HOH HOH . H 4 HOH B 61 269 269 HOH HOH . H 4 HOH B 62 270 270 HOH HOH . H 4 HOH B 63 271 271 HOH HOH . H 4 HOH B 64 272 272 HOH HOH . H 4 HOH B 65 273 273 HOH HOH . H 4 HOH B 66 274 274 HOH HOH . H 4 HOH B 67 275 275 HOH HOH . H 4 HOH B 68 276 276 HOH HOH . H 4 HOH B 69 277 277 HOH HOH . H 4 HOH B 70 278 278 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C8 N22 . . . D 3 -2.382 15.126 5.025 1 23.8 ? C8 N22 208 A 1 HETATM 2 C C7 N22 . . . D 3 -3.677 15.743 4.58 1 20.64 ? C7 N22 208 A 1 HETATM 3 C C5 N22 . . . D 3 -3.578 16.1 3.091 1 20.85 ? C5 N22 208 A 1 HETATM 4 N N4 N22 . . . D 3 -3.036 17.279 2.768 1 19.43 ? N4 N22 208 A 1 HETATM 5 C C3 N22 . . . D 3 -2.948 17.696 1.491 1 19.4 ? C3 N22 208 A 1 HETATM 6 N N8 N22 . . . D 3 -2.39 18.898 1.238 1 19.98 ? N8 N22 208 A 1 HETATM 7 N N2 N22 . . . D 3 -3.398 16.924 0.488 1 17.48 ? N2 N22 208 A 1 HETATM 8 C C1 N22 . . . D 3 -3.94 15.718 0.738 1 19.83 ? C1 N22 208 A 1 HETATM 9 N N7 N22 . . . D 3 -4.406 14.97 -0.26 1 19.26 ? N7 N22 208 A 1 HETATM 10 C C6 N22 . . . D 3 -4.06 15.283 2.067 1 20.69 ? C6 N22 208 A 1 HETATM 11 C C9 N22 . . . D 3 -4.65 14.003 2.414 1 21.02 ? C9 N22 208 A 1 HETATM 12 C C10 N22 . . . D 3 -5.164 12.918 2.811 1 21.16 ? C10 N22 208 A 1 HETATM 13 C C11 N22 . . . D 3 -5.703 11.645 3.331 1 21.67 ? C11 N22 208 A 1 HETATM 14 C C13 N22 . . . D 3 -6.708 11.844 4.484 1 26.47 ? C13 N22 208 A 1 HETATM 15 C C18 N22 . . . D 3 -7.631 12.911 4.419 1 25.75 ? C18 N22 208 A 1 HETATM 16 C C17 N22 . . . D 3 -8.582 13.112 5.436 1 28.67 ? C17 N22 208 A 1 HETATM 17 O O2 N22 . . . D 3 -9.504 14.152 5.413 1 30.1 ? O2 N22 208 A 1 HETATM 18 C C4 N22 . . . D 3 -9.408 14.979 4.254 1 32.57 ? C4 N22 208 A 1 HETATM 19 C C16 N22 . . . D 3 -8.619 12.232 6.512 1 25.36 ? C16 N22 208 A 1 HETATM 20 C C15 N22 . . . D 3 -7.722 11.164 6.574 1 29.47 ? C15 N22 208 A 1 HETATM 21 C C14 N22 . . . D 3 -6.779 10.952 5.563 1 28.54 ? C14 N22 208 A 1 HETATM 22 O O10 N22 . . . D 3 -5.899 9.882 5.606 1 29.58 ? O10 N22 208 A 1 HETATM 23 C C2 N22 . . . D 3 -6.141 8.922 6.637 1 30.29 ? C2 N22 208 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 18 _model_server_stats.element_count 23 #