data_3E2S # _model_server_result.job_id z2wLO9Wo3KiZPu-BYVYQzw _model_server_result.datetime_utc '2024-11-24 20:24:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3e2s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3E2S # _exptl.entry_id 3E2S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 115.13 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PROLINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3E2S _cell.length_a 73.062 _cell.length_b 140.931 _cell.length_c 145.338 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3E2S _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1,2 A,B,C,D,E,F 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 140.931 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C5 H9 N O2' _chem_comp.formula_weight 115.13 _chem_comp.id PRO _chem_comp.mon_nstd_flag y _chem_comp.name PROLINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA PRO sing 388 n n N CD PRO sing 389 n n N H PRO sing 390 n n CA C PRO sing 391 n n CA CB PRO sing 392 n n CA HA PRO sing 393 n n C O PRO doub 394 n n C OXT PRO sing 395 n n CB CG PRO sing 396 n n CB HB2 PRO sing 397 n n CB HB3 PRO sing 398 n n CG CD PRO sing 399 n n CG HG2 PRO sing 400 n n CG HG3 PRO sing 401 n n CD HD2 PRO sing 402 n n CD HD3 PRO sing 403 n n OXT HXT PRO sing 404 n n # _atom_sites.entry_id 3E2S _atom_sites.fract_transf_matrix[1][1] 0.013687 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007096 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006881 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PRO A 1 1 1 PRO PRO . C 3 FAD A 1 2001 2001 FAD FAD . D 4 1PE A 1 2002 2002 1PE 1PE . E 4 1PE A 1 2003 2003 1PE 1PE . F 5 HOH A 1 2004 2004 HOH HOH . F 5 HOH A 2 2005 2005 HOH HOH . F 5 HOH A 3 2006 2006 HOH HOH . F 5 HOH A 4 2007 2007 HOH HOH . F 5 HOH A 5 2008 2008 HOH HOH . F 5 HOH A 6 2009 2009 HOH HOH . F 5 HOH A 7 2010 2010 HOH HOH . F 5 HOH A 8 2011 2011 HOH HOH . F 5 HOH A 9 2012 2012 HOH HOH . F 5 HOH A 10 2013 2013 HOH HOH . F 5 HOH A 11 2014 2014 HOH HOH . F 5 HOH A 12 2015 2015 HOH HOH . F 5 HOH A 13 2016 2016 HOH HOH . F 5 HOH A 14 2017 2017 HOH HOH . F 5 HOH A 15 2018 2018 HOH HOH . F 5 HOH A 16 2019 2019 HOH HOH . F 5 HOH A 17 2020 2020 HOH HOH . F 5 HOH A 18 2021 2021 HOH HOH . F 5 HOH A 19 2022 2022 HOH HOH . F 5 HOH A 20 2023 2023 HOH HOH . F 5 HOH A 21 2024 2024 HOH HOH . F 5 HOH A 22 2025 2025 HOH HOH . F 5 HOH A 23 2026 2026 HOH HOH . F 5 HOH A 24 2027 2027 HOH HOH . F 5 HOH A 25 2028 2028 HOH HOH . F 5 HOH A 26 2029 2029 HOH HOH . F 5 HOH A 27 2030 2030 HOH HOH . F 5 HOH A 28 2031 2031 HOH HOH . F 5 HOH A 29 2032 2032 HOH HOH . F 5 HOH A 30 2033 2033 HOH HOH . F 5 HOH A 31 2034 2034 HOH HOH . F 5 HOH A 32 2035 2035 HOH HOH . F 5 HOH A 33 2036 2036 HOH HOH . F 5 HOH A 34 2037 2037 HOH HOH . F 5 HOH A 35 2038 2038 HOH HOH . F 5 HOH A 36 2039 2039 HOH HOH . F 5 HOH A 37 2040 2040 HOH HOH . F 5 HOH A 38 2041 2041 HOH HOH . F 5 HOH A 39 2042 2042 HOH HOH . F 5 HOH A 40 2043 2043 HOH HOH . F 5 HOH A 41 2044 2044 HOH HOH . F 5 HOH A 42 2045 2045 HOH HOH . F 5 HOH A 43 2046 2046 HOH HOH . F 5 HOH A 44 2047 2047 HOH HOH . F 5 HOH A 45 2048 2048 HOH HOH . F 5 HOH A 46 2049 2049 HOH HOH . F 5 HOH A 47 2050 2050 HOH HOH . F 5 HOH A 48 2051 2051 HOH HOH . F 5 HOH A 49 2052 2052 HOH HOH . F 5 HOH A 50 2053 2053 HOH HOH . F 5 HOH A 51 2054 2054 HOH HOH . F 5 HOH A 52 2055 2055 HOH HOH . F 5 HOH A 53 2056 2056 HOH HOH . F 5 HOH A 54 2057 2057 HOH HOH . F 5 HOH A 55 2058 2058 HOH HOH . F 5 HOH A 56 2059 2059 HOH HOH . F 5 HOH A 57 2060 2060 HOH HOH . F 5 HOH A 58 2061 2061 HOH HOH . F 5 HOH A 59 2062 2062 HOH HOH . F 5 HOH A 60 2063 2063 HOH HOH . F 5 HOH A 61 2064 2064 HOH HOH . F 5 HOH A 62 2065 2065 HOH HOH . F 5 HOH A 63 2066 2066 HOH HOH . F 5 HOH A 64 2067 2067 HOH HOH . F 5 HOH A 65 2068 2068 HOH HOH . F 5 HOH A 66 2069 2069 HOH HOH . F 5 HOH A 67 2070 2070 HOH HOH . F 5 HOH A 68 2071 2071 HOH HOH . F 5 HOH A 69 2072 2072 HOH HOH . F 5 HOH A 70 2073 2073 HOH HOH . F 5 HOH A 71 2074 2074 HOH HOH . F 5 HOH A 72 2075 2075 HOH HOH . F 5 HOH A 73 2076 2076 HOH HOH . F 5 HOH A 74 2077 2077 HOH HOH . F 5 HOH A 75 2078 2078 HOH HOH . F 5 HOH A 76 2079 2079 HOH HOH . F 5 HOH A 77 2080 2080 HOH HOH . F 5 HOH A 78 2081 2081 HOH HOH . F 5 HOH A 79 2082 2082 HOH HOH . F 5 HOH A 80 2083 2083 HOH HOH . F 5 HOH A 81 2084 2084 HOH HOH . F 5 HOH A 82 2085 2085 HOH HOH . F 5 HOH A 83 2086 2086 HOH HOH . F 5 HOH A 84 2087 2087 HOH HOH . F 5 HOH A 85 2088 2088 HOH HOH . F 5 HOH A 86 2089 2089 HOH HOH . F 5 HOH A 87 2090 2090 HOH HOH . F 5 HOH A 88 2091 2091 HOH HOH . F 5 HOH A 89 2092 2092 HOH HOH . F 5 HOH A 90 2093 2093 HOH HOH . F 5 HOH A 91 2094 2094 HOH HOH . F 5 HOH A 92 2095 2095 HOH HOH . F 5 HOH A 93 2096 2096 HOH HOH . F 5 HOH A 94 2097 2097 HOH HOH . F 5 HOH A 95 2098 2098 HOH HOH . F 5 HOH A 96 2099 2099 HOH HOH . F 5 HOH A 97 2100 2100 HOH HOH . F 5 HOH A 98 2101 2101 HOH HOH . F 5 HOH A 99 2102 2102 HOH HOH . F 5 HOH A 100 2103 2103 HOH HOH . F 5 HOH A 101 2104 2104 HOH HOH . F 5 HOH A 102 2105 2105 HOH HOH . F 5 HOH A 103 2106 2106 HOH HOH . F 5 HOH A 104 2107 2107 HOH HOH . F 5 HOH A 105 2108 2108 HOH HOH . F 5 HOH A 106 2109 2109 HOH HOH . F 5 HOH A 107 2110 2110 HOH HOH . F 5 HOH A 108 2111 2111 HOH HOH . F 5 HOH A 109 2112 2112 HOH HOH . F 5 HOH A 110 2113 2113 HOH HOH . F 5 HOH A 111 2114 2114 HOH HOH . F 5 HOH A 112 2115 2115 HOH HOH . F 5 HOH A 113 2116 2116 HOH HOH . F 5 HOH A 114 2117 2117 HOH HOH . F 5 HOH A 115 2118 2118 HOH HOH . F 5 HOH A 116 2119 2119 HOH HOH . F 5 HOH A 117 2120 2120 HOH HOH . F 5 HOH A 118 2121 2121 HOH HOH . F 5 HOH A 119 2122 2122 HOH HOH . F 5 HOH A 120 2123 2123 HOH HOH . F 5 HOH A 121 2124 2124 HOH HOH . F 5 HOH A 122 2125 2125 HOH HOH . F 5 HOH A 123 2126 2126 HOH HOH . F 5 HOH A 124 2127 2127 HOH HOH . F 5 HOH A 125 2128 2128 HOH HOH . F 5 HOH A 126 2129 2129 HOH HOH . F 5 HOH A 127 2130 2130 HOH HOH . F 5 HOH A 128 2131 2131 HOH HOH . F 5 HOH A 129 2132 2132 HOH HOH . F 5 HOH A 130 2133 2133 HOH HOH . F 5 HOH A 131 2134 2134 HOH HOH . F 5 HOH A 132 2135 2135 HOH HOH . F 5 HOH A 133 2136 2136 HOH HOH . F 5 HOH A 134 2137 2137 HOH HOH . F 5 HOH A 135 2138 2138 HOH HOH . F 5 HOH A 136 2139 2139 HOH HOH . F 5 HOH A 137 2140 2140 HOH HOH . F 5 HOH A 138 2141 2141 HOH HOH . F 5 HOH A 139 2142 2142 HOH HOH . F 5 HOH A 140 2143 2143 HOH HOH . F 5 HOH A 141 2144 2144 HOH HOH . F 5 HOH A 142 2145 2145 HOH HOH . F 5 HOH A 143 2146 2146 HOH HOH . F 5 HOH A 144 2147 2147 HOH HOH . F 5 HOH A 145 2148 2148 HOH HOH . F 5 HOH A 146 2149 2149 HOH HOH . F 5 HOH A 147 2150 2150 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N PRO . . . B 2 12.102 48.178 49.87 1 19.5 ? N PRO 1 A 1 HETATM 2 C CA PRO . . . B 2 11.436 48.702 48.756 1 21 ? CA PRO 1 A 1 HETATM 3 C C PRO . . . B 2 12.313 48.906 47.627 1 29.23 ? C PRO 1 A 1 HETATM 4 O O PRO . . . B 2 13.497 48.919 47.764 1 22.77 ? O PRO 1 A 1 HETATM 5 C CB PRO . . . B 2 10.715 49.906 49.06 1 15.51 ? CB PRO 1 A 1 HETATM 6 C CG PRO . . . B 2 11.457 50.51 50.243 1 27.13 ? CG PRO 1 A 1 HETATM 7 C CD PRO . . . B 2 12.611 49.561 50.504 1 22.95 ? CD PRO 1 A 1 HETATM 8 O OXT PRO . . . B 2 11.849 49.061 46.543 1 23.52 ? OXT PRO 1 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 213 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #