data_3E3U # _model_server_result.job_id 7ddecmnRuv5mvuRwwxiUmg _model_server_result.datetime_utc '2024-11-27 19:44:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3e3u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":200}' # _entry.id 3E3U # _exptl.entry_id 3E3U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.693 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NICKEL (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.39 _cell.angle_gamma 90 _cell.entry_id 3E3U _cell.length_a 100.87 _cell.length_b 54.765 _cell.length_c 40.215 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3E3U _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 148 A HIS 148 1_555 B NI NI . A NI 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc2 A NE2 HIS 152 A HIS 152 1_555 B NI NI . A NI 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? metalc ? metalc3 B NI NI . A NI 200 1_555 C O35 NVC . A NVC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? metalc ? metalc4 B NI NI . A NI 200 1_555 C O39 NVC . A NVC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? # _chem_comp.formula 'Ni 2' _chem_comp.formula_weight 58.693 _chem_comp.id NI _chem_comp.mon_nstd_flag . _chem_comp.name 'NICKEL (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3E3U _atom_sites.fract_transf_matrix[1][1] 0.009914 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000761 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01826 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02494 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NI A 1 200 200 NI NI . C 3 NVC A 1 201 201 NVC NVC . D 3 NVC A 1 202 202 NVC NVC . E 3 NVC A 1 203 203 NVC NVC . F 4 HOH A 1 204 204 HOH HOH . F 4 HOH A 2 205 205 HOH HOH . F 4 HOH A 3 206 206 HOH HOH . F 4 HOH A 4 207 207 HOH HOH . F 4 HOH A 5 208 208 HOH HOH . F 4 HOH A 6 209 209 HOH HOH . F 4 HOH A 7 210 210 HOH HOH . F 4 HOH A 8 211 211 HOH HOH . F 4 HOH A 9 212 212 HOH HOH . F 4 HOH A 10 213 213 HOH HOH . F 4 HOH A 11 214 214 HOH HOH . F 4 HOH A 12 215 215 HOH HOH . F 4 HOH A 13 216 216 HOH HOH . F 4 HOH A 14 217 217 HOH HOH . F 4 HOH A 15 218 218 HOH HOH . F 4 HOH A 16 219 219 HOH HOH . F 4 HOH A 17 220 220 HOH HOH . F 4 HOH A 18 221 221 HOH HOH . F 4 HOH A 19 222 222 HOH HOH . F 4 HOH A 20 223 223 HOH HOH . F 4 HOH A 21 224 224 HOH HOH . F 4 HOH A 22 225 225 HOH HOH . F 4 HOH A 23 226 226 HOH HOH . F 4 HOH A 24 227 227 HOH HOH . F 4 HOH A 25 228 228 HOH HOH . F 4 HOH A 26 229 229 HOH HOH . F 4 HOH A 27 230 230 HOH HOH . F 4 HOH A 28 231 231 HOH HOH . F 4 HOH A 29 232 232 HOH HOH . F 4 HOH A 30 233 233 HOH HOH . F 4 HOH A 31 234 234 HOH HOH . F 4 HOH A 32 235 235 HOH HOH . F 4 HOH A 33 236 236 HOH HOH . F 4 HOH A 34 237 237 HOH HOH . F 4 HOH A 35 238 238 HOH HOH . F 4 HOH A 36 239 239 HOH HOH . F 4 HOH A 37 240 240 HOH HOH . F 4 HOH A 38 241 241 HOH HOH . F 4 HOH A 39 242 242 HOH HOH . F 4 HOH A 40 243 243 HOH HOH . F 4 HOH A 41 244 244 HOH HOH . F 4 HOH A 42 245 245 HOH HOH . F 4 HOH A 43 246 246 HOH HOH . F 4 HOH A 44 247 247 HOH HOH . F 4 HOH A 45 248 248 HOH HOH . F 4 HOH A 46 249 249 HOH HOH . F 4 HOH A 47 250 250 HOH HOH . F 4 HOH A 48 251 251 HOH HOH . F 4 HOH A 49 252 252 HOH HOH . F 4 HOH A 50 253 253 HOH HOH . F 4 HOH A 51 254 254 HOH HOH . F 4 HOH A 52 255 255 HOH HOH . F 4 HOH A 53 256 256 HOH HOH . F 4 HOH A 54 257 257 HOH HOH . F 4 HOH A 55 258 258 HOH HOH . F 4 HOH A 56 259 259 HOH HOH . F 4 HOH A 57 260 260 HOH HOH . F 4 HOH A 58 261 261 HOH HOH . F 4 HOH A 59 262 262 HOH HOH . F 4 HOH A 60 263 263 HOH HOH . F 4 HOH A 61 264 264 HOH HOH . F 4 HOH A 62 265 265 HOH HOH . F 4 HOH A 63 266 266 HOH HOH . F 4 HOH A 64 267 267 HOH HOH . F 4 HOH A 65 268 268 HOH HOH . F 4 HOH A 66 269 269 HOH HOH . F 4 HOH A 67 270 270 HOH HOH . F 4 HOH A 68 271 271 HOH HOH . F 4 HOH A 69 272 272 HOH HOH . F 4 HOH A 70 273 273 HOH HOH . F 4 HOH A 71 274 274 HOH HOH . F 4 HOH A 72 275 275 HOH HOH . F 4 HOH A 73 276 276 HOH HOH . F 4 HOH A 74 277 277 HOH HOH . F 4 HOH A 75 278 278 HOH HOH . F 4 HOH A 76 279 279 HOH HOH . F 4 HOH A 77 280 280 HOH HOH . F 4 HOH A 78 281 281 HOH HOH . F 4 HOH A 79 282 282 HOH HOH . F 4 HOH A 80 283 283 HOH HOH . F 4 HOH A 81 284 284 HOH HOH . F 4 HOH A 82 285 285 HOH HOH . F 4 HOH A 83 286 286 HOH HOH . F 4 HOH A 84 287 287 HOH HOH . F 4 HOH A 85 288 288 HOH HOH . F 4 HOH A 86 289 289 HOH HOH . F 4 HOH A 87 290 290 HOH HOH . F 4 HOH A 88 291 291 HOH HOH . F 4 HOH A 89 292 292 HOH HOH . F 4 HOH A 90 293 293 HOH HOH . F 4 HOH A 91 294 294 HOH HOH . F 4 HOH A 92 295 295 HOH HOH . F 4 HOH A 93 296 296 HOH HOH . F 4 HOH A 94 297 297 HOH HOH . F 4 HOH A 95 298 298 HOH HOH . F 4 HOH A 96 299 299 HOH HOH . F 4 HOH A 97 300 300 HOH HOH . F 4 HOH A 98 301 301 HOH HOH . F 4 HOH A 99 302 302 HOH HOH . F 4 HOH A 100 303 303 HOH HOH . F 4 HOH A 101 304 304 HOH HOH . F 4 HOH A 102 305 305 HOH HOH . F 4 HOH A 103 306 306 HOH HOH . F 4 HOH A 104 307 307 HOH HOH . F 4 HOH A 105 308 308 HOH HOH . F 4 HOH A 106 309 309 HOH HOH . F 4 HOH A 107 310 310 HOH HOH . F 4 HOH A 108 311 311 HOH HOH . F 4 HOH A 109 312 312 HOH HOH . F 4 HOH A 110 313 313 HOH HOH . F 4 HOH A 111 314 314 HOH HOH . F 4 HOH A 112 315 315 HOH HOH . F 4 HOH A 113 316 316 HOH HOH . F 4 HOH A 114 317 317 HOH HOH . F 4 HOH A 115 318 318 HOH HOH . F 4 HOH A 116 319 319 HOH HOH . F 4 HOH A 117 320 320 HOH HOH . F 4 HOH A 118 321 321 HOH HOH . F 4 HOH A 119 322 322 HOH HOH . F 4 HOH A 120 323 323 HOH HOH . F 4 HOH A 121 324 324 HOH HOH . F 4 HOH A 122 325 325 HOH HOH . F 4 HOH A 123 326 326 HOH HOH . F 4 HOH A 124 327 327 HOH HOH . F 4 HOH A 125 328 328 HOH HOH . F 4 HOH A 126 330 330 HOH HOH . F 4 HOH A 127 331 331 HOH HOH . F 4 HOH A 128 332 332 HOH HOH . F 4 HOH A 129 333 333 HOH HOH . F 4 HOH A 130 334 334 HOH HOH . F 4 HOH A 131 335 335 HOH HOH . F 4 HOH A 132 336 336 HOH HOH . F 4 HOH A 133 337 337 HOH HOH . F 4 HOH A 134 338 338 HOH HOH . F 4 HOH A 135 339 339 HOH HOH . F 4 HOH A 136 340 340 HOH HOH . F 4 HOH A 137 341 341 HOH HOH . F 4 HOH A 138 342 342 HOH HOH . F 4 HOH A 139 343 343 HOH HOH . F 4 HOH A 140 344 344 HOH HOH . F 4 HOH A 141 345 345 HOH HOH . F 4 HOH A 142 346 346 HOH HOH . F 4 HOH A 143 347 347 HOH HOH . F 4 HOH A 144 348 348 HOH HOH . F 4 HOH A 145 349 349 HOH HOH . F 4 HOH A 146 350 350 HOH HOH . F 4 HOH A 147 351 351 HOH HOH . F 4 HOH A 148 352 352 HOH HOH . F 4 HOH A 149 353 353 HOH HOH . F 4 HOH A 150 354 354 HOH HOH . F 4 HOH A 151 355 355 HOH HOH . F 4 HOH A 152 356 356 HOH HOH . F 4 HOH A 153 357 357 HOH HOH . F 4 HOH A 154 358 358 HOH HOH . F 4 HOH A 155 359 359 HOH HOH . F 4 HOH A 156 360 360 HOH HOH . F 4 HOH A 157 361 361 HOH HOH . F 4 HOH A 158 362 362 HOH HOH . F 4 HOH A 159 363 363 HOH HOH . F 4 HOH A 160 364 364 HOH HOH . F 4 HOH A 161 365 365 HOH HOH . F 4 HOH A 162 366 366 HOH HOH . F 4 HOH A 163 367 367 HOH HOH . F 4 HOH A 164 368 368 HOH HOH . F 4 HOH A 165 369 369 HOH HOH . F 4 HOH A 166 370 370 HOH HOH . F 4 HOH A 167 371 371 HOH HOH . F 4 HOH A 168 372 372 HOH HOH . F 4 HOH A 169 373 373 HOH HOH . F 4 HOH A 170 374 374 HOH HOH . F 4 HOH A 171 375 375 HOH HOH . F 4 HOH A 172 376 376 HOH HOH . F 4 HOH A 173 377 377 HOH HOH . F 4 HOH A 174 378 378 HOH HOH . F 4 HOH A 175 379 379 HOH HOH . F 4 HOH A 176 380 380 HOH HOH . F 4 HOH A 177 381 381 HOH HOH . F 4 HOH A 178 382 382 HOH HOH . F 4 HOH A 179 383 383 HOH HOH . F 4 HOH A 180 384 384 HOH HOH . F 4 HOH A 181 385 385 HOH HOH . F 4 HOH A 182 386 386 HOH HOH . F 4 HOH A 183 387 387 HOH HOH . F 4 HOH A 184 388 388 HOH HOH . F 4 HOH A 185 389 389 HOH HOH . F 4 HOH A 186 390 390 HOH HOH . F 4 HOH A 187 391 391 HOH HOH . F 4 HOH A 188 392 392 HOH HOH . F 4 HOH A 189 393 393 HOH HOH . F 4 HOH A 190 394 394 HOH HOH . F 4 HOH A 191 395 395 HOH HOH . F 4 HOH A 192 396 396 HOH HOH . F 4 HOH A 193 397 397 HOH HOH . F 4 HOH A 194 398 398 HOH HOH . F 4 HOH A 195 399 399 HOH HOH . F 4 HOH A 196 400 400 HOH HOH . F 4 HOH A 197 401 401 HOH HOH . F 4 HOH A 198 402 402 HOH HOH . F 4 HOH A 199 403 403 HOH HOH . F 4 HOH A 200 404 404 HOH HOH . F 4 HOH A 201 405 405 HOH HOH . F 4 HOH A 202 406 406 HOH HOH . F 4 HOH A 203 407 407 HOH HOH . F 4 HOH A 204 408 408 HOH HOH . F 4 HOH A 205 409 409 HOH HOH . F 4 HOH A 206 410 410 HOH HOH . F 4 HOH A 207 411 411 HOH HOH . F 4 HOH A 208 412 412 HOH HOH . F 4 HOH A 209 413 413 HOH HOH . F 4 HOH A 210 414 414 HOH HOH . F 4 HOH A 211 415 415 HOH HOH . F 4 HOH A 212 416 416 HOH HOH . F 4 HOH A 213 417 417 HOH HOH . F 4 HOH A 214 418 418 HOH HOH . F 4 HOH A 215 419 419 HOH HOH . F 4 HOH A 216 420 420 HOH HOH . F 4 HOH A 217 421 421 HOH HOH . F 4 HOH A 218 422 422 HOH HOH . F 4 HOH A 219 423 423 HOH HOH . F 4 HOH A 220 424 424 HOH HOH . F 4 HOH A 221 425 425 HOH HOH . F 4 HOH A 222 426 426 HOH HOH . F 4 HOH A 223 427 427 HOH HOH . F 4 HOH A 224 428 428 HOH HOH . F 4 HOH A 225 429 429 HOH HOH . F 4 HOH A 226 430 430 HOH HOH . F 4 HOH A 227 431 431 HOH HOH . F 4 HOH A 228 432 432 HOH HOH . F 4 HOH A 229 433 433 HOH HOH . F 4 HOH A 230 434 434 HOH HOH . F 4 HOH A 231 435 435 HOH HOH . F 4 HOH A 232 436 436 HOH HOH . F 4 HOH A 233 437 437 HOH HOH . F 4 HOH A 234 438 438 HOH HOH . F 4 HOH A 235 439 439 HOH HOH . F 4 HOH A 236 440 440 HOH HOH . F 4 HOH A 237 441 441 HOH HOH . F 4 HOH A 238 442 442 HOH HOH . F 4 HOH A 239 443 443 HOH HOH . F 4 HOH A 240 444 444 HOH HOH . F 4 HOH A 241 445 445 HOH HOH . F 4 HOH A 242 446 446 HOH HOH . F 4 HOH A 243 447 447 HOH HOH . F 4 HOH A 244 448 448 HOH HOH . F 4 HOH A 245 449 449 HOH HOH . F 4 HOH A 246 450 450 HOH HOH . F 4 HOH A 247 451 451 HOH HOH . F 4 HOH A 248 452 452 HOH HOH . F 4 HOH A 249 453 453 HOH HOH . F 4 HOH A 250 454 454 HOH HOH . F 4 HOH A 251 455 455 HOH HOH . F 4 HOH A 252 456 456 HOH HOH . F 4 HOH A 253 457 457 HOH HOH . F 4 HOH A 254 458 458 HOH HOH . F 4 HOH A 255 459 459 HOH HOH . F 4 HOH A 256 460 460 HOH HOH . F 4 HOH A 257 461 461 HOH HOH . F 4 HOH A 258 462 462 HOH HOH . F 4 HOH A 259 463 463 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NI _atom_site.label_atom_id NI _atom_site.label_comp_id NI _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 15.02 _atom_site.Cartn_y 57.725 _atom_site.Cartn_z 14.509 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 13.17 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NI _atom_site.auth_comp_id NI _atom_site.auth_seq_id 200 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 1 #