data_3E4E # _model_server_result.job_id zvs1_HzCdApn8-dgMOknKA _model_server_result.datetime_utc '2024-10-17 18:27:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3e4e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":501}' # _entry.id 3E4E # _exptl.entry_id 3E4E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 82.104 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-methyl-1H-pyrazole _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3E4E _cell.length_a 71.193 _cell.length_b 71.193 _cell.length_c 225.888 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3E4E _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 416 A CYS 437 1_555 C FE HEM . A HEM 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.674 ? metalc ? metalc2 C FE HEM . A HEM 500 1_555 D N2 4PZ . A 4PZ 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.575 ? metalc ? metalc3 B SG CYS 416 B CYS 437 1_555 E FE HEM . B HEM 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? metalc ? metalc4 E FE HEM . B HEM 500 1_555 F N2 4PZ . B 4PZ 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.715 ? # _chem_comp.formula 'C4 H6 N2' _chem_comp.formula_weight 82.104 _chem_comp.id 4PZ _chem_comp.mon_nstd_flag . _chem_comp.name 4-methyl-1H-pyrazole _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C3 N2 4PZ sing 1 n y C3 C4 4PZ doub 2 n y N2 N1 4PZ sing 3 n y N1 C5 4PZ doub 4 n y C4 C19 4PZ sing 5 n n C4 C5 4PZ sing 6 n y C3 H3 4PZ sing 7 n n N2 HN2 4PZ sing 8 n n C19 H19 4PZ sing 9 n n C19 H19A 4PZ sing 10 n n C19 H19B 4PZ sing 11 n n C5 H5 4PZ sing 12 n n # _atom_sites.entry_id 3E4E _atom_sites.fract_transf_matrix[1][1] 0.014046 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014046 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004427 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 500 500 HEM HEM . D 3 4PZ A 1 501 501 4PZ 4PZ . E 2 HEM B 1 500 500 HEM HEM . F 3 4PZ B 1 501 501 4PZ 4PZ . G 4 HOH A 1 502 502 HOH HOH . G 4 HOH A 2 503 503 HOH HOH . G 4 HOH A 3 504 504 HOH HOH . G 4 HOH A 4 505 505 HOH HOH . G 4 HOH A 5 506 506 HOH HOH . G 4 HOH A 6 507 507 HOH HOH . G 4 HOH A 7 508 508 HOH HOH . G 4 HOH A 8 509 509 HOH HOH . G 4 HOH A 9 510 510 HOH HOH . G 4 HOH A 10 511 511 HOH HOH . G 4 HOH A 11 512 512 HOH HOH . G 4 HOH A 12 513 513 HOH HOH . G 4 HOH A 13 514 514 HOH HOH . G 4 HOH A 14 515 515 HOH HOH . G 4 HOH A 15 516 516 HOH HOH . G 4 HOH A 16 517 517 HOH HOH . G 4 HOH A 17 518 518 HOH HOH . G 4 HOH A 18 519 519 HOH HOH . G 4 HOH A 19 520 520 HOH HOH . G 4 HOH A 20 521 521 HOH HOH . G 4 HOH A 21 522 522 HOH HOH . G 4 HOH A 22 523 523 HOH HOH . G 4 HOH A 23 524 524 HOH HOH . G 4 HOH A 24 525 525 HOH HOH . G 4 HOH A 25 526 526 HOH HOH . G 4 HOH A 26 527 527 HOH HOH . G 4 HOH A 27 528 528 HOH HOH . G 4 HOH A 28 529 529 HOH HOH . G 4 HOH A 29 530 530 HOH HOH . G 4 HOH A 30 531 531 HOH HOH . G 4 HOH A 31 532 532 HOH HOH . G 4 HOH A 32 533 533 HOH HOH . G 4 HOH A 33 534 534 HOH HOH . H 4 HOH B 1 502 502 HOH HOH . H 4 HOH B 2 503 503 HOH HOH . H 4 HOH B 3 504 504 HOH HOH . H 4 HOH B 4 505 505 HOH HOH . H 4 HOH B 5 506 506 HOH HOH . H 4 HOH B 6 507 507 HOH HOH . H 4 HOH B 7 508 508 HOH HOH . H 4 HOH B 8 509 509 HOH HOH . H 4 HOH B 9 510 510 HOH HOH . H 4 HOH B 10 511 511 HOH HOH . H 4 HOH B 11 512 512 HOH HOH . H 4 HOH B 12 513 513 HOH HOH . H 4 HOH B 13 514 514 HOH HOH . H 4 HOH B 14 515 515 HOH HOH . H 4 HOH B 15 516 516 HOH HOH . H 4 HOH B 16 517 517 HOH HOH . H 4 HOH B 17 518 518 HOH HOH . H 4 HOH B 18 519 519 HOH HOH . H 4 HOH B 19 520 520 HOH HOH . H 4 HOH B 20 521 521 HOH HOH . H 4 HOH B 21 522 522 HOH HOH . H 4 HOH B 22 523 523 HOH HOH . H 4 HOH B 23 524 524 HOH HOH . H 4 HOH B 24 525 525 HOH HOH . H 4 HOH B 25 526 526 HOH HOH . H 4 HOH B 26 527 527 HOH HOH . H 4 HOH B 27 528 528 HOH HOH . H 4 HOH B 28 529 529 HOH HOH . H 4 HOH B 29 530 530 HOH HOH . H 4 HOH B 30 531 531 HOH HOH . H 4 HOH B 31 532 532 HOH HOH . H 4 HOH B 32 533 533 HOH HOH . H 4 HOH B 33 534 534 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C3 4PZ . . . F 3 5.97 -4.602 36.398 1 53.28 ? C3 4PZ 501 B 1 HETATM 2 N N2 4PZ . . . F 3 5.694 -3.451 37.084 1 55.91 ? N2 4PZ 501 B 1 HETATM 3 N N1 4PZ . . . F 3 5.208 -2.495 36.161 1 57.19 ? N1 4PZ 501 B 1 HETATM 4 C C4 4PZ . . . F 3 5.634 -4.291 35.11 1 54.04 ? C4 4PZ 501 B 1 HETATM 5 C C19 4PZ . . . F 3 5.78 -5.276 33.988 1 54.77 ? C19 4PZ 501 B 1 HETATM 6 C C5 4PZ . . . F 3 5.164 -3.015 34.911 1 54.29 ? C5 4PZ 501 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 259 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 6 #