data_3E4Y # _model_server_result.job_id M9PLWWH1h1aw9c1jq5wf1A _model_server_result.datetime_utc '2025-07-31 01:33:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3e4y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":710}' # _entry.id 3E4Y # _exptl.entry_id 3E4Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3E4Y _cell.length_a 69.604 _cell.length_b 92.68 _cell.length_c 165.499 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3E4Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 24 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OH _struct_conn.ptnr1_label_comp_id TYR _struct_conn.ptnr1_label_seq_id 301 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id TYR _struct_conn.ptnr1_auth_seq_id 294 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id FE _struct_conn.ptnr2_label_comp_id HEM _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id HEM _struct_conn.ptnr2_auth_seq_id 501 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.469 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 355 n n P O2 PO4 sing 356 n n P O3 PO4 sing 357 n n P O4 PO4 sing 358 n n # _atom_sites.entry_id 3E4Y _atom_sites.fract_transf_matrix[1][1] 0.014367 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01079 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006042 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 501 501 HEM HEM . C 3 GOL A 1 610 610 GOL GOL . D 3 GOL A 1 620 620 GOL GOL . E 4 PO4 A 1 710 710 PO4 PO4 . F 5 HOH A 1 711 1 HOH HOH . F 5 HOH A 2 712 2 HOH HOH . F 5 HOH A 3 713 3 HOH HOH . F 5 HOH A 4 714 4 HOH HOH . F 5 HOH A 5 715 5 HOH HOH . F 5 HOH A 6 716 6 HOH HOH . F 5 HOH A 7 717 7 HOH HOH . F 5 HOH A 8 718 8 HOH HOH . F 5 HOH A 9 719 9 HOH HOH . F 5 HOH A 10 720 10 HOH HOH . F 5 HOH A 11 721 11 HOH HOH . F 5 HOH A 12 722 12 HOH HOH . F 5 HOH A 13 723 13 HOH HOH . F 5 HOH A 14 724 14 HOH HOH . F 5 HOH A 15 725 15 HOH HOH . F 5 HOH A 16 726 16 HOH HOH . F 5 HOH A 17 727 17 HOH HOH . F 5 HOH A 18 728 18 HOH HOH . F 5 HOH A 19 729 19 HOH HOH . F 5 HOH A 20 730 20 HOH HOH . F 5 HOH A 21 731 21 HOH HOH . F 5 HOH A 22 732 22 HOH HOH . F 5 HOH A 23 733 23 HOH HOH . F 5 HOH A 24 734 24 HOH HOH . F 5 HOH A 25 735 25 HOH HOH . F 5 HOH A 26 736 26 HOH HOH . F 5 HOH A 27 737 27 HOH HOH . F 5 HOH A 28 738 28 HOH HOH . F 5 HOH A 29 739 29 HOH HOH . F 5 HOH A 30 740 30 HOH HOH . F 5 HOH A 31 741 31 HOH HOH . F 5 HOH A 32 742 32 HOH HOH . F 5 HOH A 33 743 33 HOH HOH . F 5 HOH A 34 744 34 HOH HOH . F 5 HOH A 35 745 35 HOH HOH . F 5 HOH A 36 746 36 HOH HOH . F 5 HOH A 37 747 37 HOH HOH . F 5 HOH A 38 748 38 HOH HOH . F 5 HOH A 39 749 39 HOH HOH . F 5 HOH A 40 750 40 HOH HOH . F 5 HOH A 41 751 41 HOH HOH . F 5 HOH A 42 752 42 HOH HOH . F 5 HOH A 43 753 43 HOH HOH . F 5 HOH A 44 754 44 HOH HOH . F 5 HOH A 45 755 45 HOH HOH . F 5 HOH A 46 756 46 HOH HOH . F 5 HOH A 47 757 47 HOH HOH . F 5 HOH A 48 758 48 HOH HOH . F 5 HOH A 49 759 49 HOH HOH . F 5 HOH A 50 760 50 HOH HOH . F 5 HOH A 51 761 51 HOH HOH . F 5 HOH A 52 762 52 HOH HOH . F 5 HOH A 53 763 53 HOH HOH . F 5 HOH A 54 764 54 HOH HOH . F 5 HOH A 55 765 55 HOH HOH . F 5 HOH A 56 766 56 HOH HOH . F 5 HOH A 57 767 57 HOH HOH . F 5 HOH A 58 768 58 HOH HOH . F 5 HOH A 59 769 59 HOH HOH . F 5 HOH A 60 770 60 HOH HOH . F 5 HOH A 61 771 61 HOH HOH . F 5 HOH A 62 772 62 HOH HOH . F 5 HOH A 63 773 63 HOH HOH . F 5 HOH A 64 774 64 HOH HOH . F 5 HOH A 65 775 65 HOH HOH . F 5 HOH A 66 776 66 HOH HOH . F 5 HOH A 67 777 67 HOH HOH . F 5 HOH A 68 778 68 HOH HOH . F 5 HOH A 69 779 69 HOH HOH . F 5 HOH A 70 780 70 HOH HOH . F 5 HOH A 71 781 71 HOH HOH . F 5 HOH A 72 782 72 HOH HOH . F 5 HOH A 73 783 73 HOH HOH . F 5 HOH A 74 784 74 HOH HOH . F 5 HOH A 75 785 75 HOH HOH . F 5 HOH A 76 786 76 HOH HOH . F 5 HOH A 77 787 77 HOH HOH . F 5 HOH A 78 788 78 HOH HOH . F 5 HOH A 79 789 79 HOH HOH . F 5 HOH A 80 790 80 HOH HOH . F 5 HOH A 81 791 81 HOH HOH . F 5 HOH A 82 792 82 HOH HOH . F 5 HOH A 83 793 83 HOH HOH . F 5 HOH A 84 794 84 HOH HOH . F 5 HOH A 85 795 85 HOH HOH . F 5 HOH A 86 796 86 HOH HOH . F 5 HOH A 87 797 87 HOH HOH . F 5 HOH A 88 798 88 HOH HOH . F 5 HOH A 89 799 89 HOH HOH . F 5 HOH A 90 800 90 HOH HOH . F 5 HOH A 91 801 91 HOH HOH . F 5 HOH A 92 802 92 HOH HOH . F 5 HOH A 93 803 93 HOH HOH . F 5 HOH A 94 804 94 HOH HOH . F 5 HOH A 95 805 95 HOH HOH . F 5 HOH A 96 806 96 HOH HOH . F 5 HOH A 97 807 97 HOH HOH . F 5 HOH A 98 808 98 HOH HOH . F 5 HOH A 99 809 99 HOH HOH . F 5 HOH A 100 810 100 HOH HOH . F 5 HOH A 101 811 101 HOH HOH . F 5 HOH A 102 812 102 HOH HOH . F 5 HOH A 103 813 103 HOH HOH . F 5 HOH A 104 814 104 HOH HOH . F 5 HOH A 105 815 105 HOH HOH . F 5 HOH A 106 816 106 HOH HOH . F 5 HOH A 107 817 107 HOH HOH . F 5 HOH A 108 818 108 HOH HOH . F 5 HOH A 109 819 109 HOH HOH . F 5 HOH A 110 820 110 HOH HOH . F 5 HOH A 111 821 111 HOH HOH . F 5 HOH A 112 822 112 HOH HOH . F 5 HOH A 113 823 113 HOH HOH . F 5 HOH A 114 824 114 HOH HOH . F 5 HOH A 115 825 115 HOH HOH . F 5 HOH A 116 826 116 HOH HOH . F 5 HOH A 117 827 117 HOH HOH . F 5 HOH A 118 828 118 HOH HOH . F 5 HOH A 119 829 119 HOH HOH . F 5 HOH A 120 830 120 HOH HOH . F 5 HOH A 121 831 121 HOH HOH . F 5 HOH A 122 832 122 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . E 4 9.433 -4.516 9.833 0.5 47.75 ? P PO4 710 A 1 HETATM 2 O O1 PO4 . . . E 4 9.653 -3.004 10.335 0.5 37.45 ? O1 PO4 710 A 1 HETATM 3 O O2 PO4 . . . E 4 8.131 -4.584 8.884 0.5 42.13 ? O2 PO4 710 A 1 HETATM 4 O O3 PO4 . . . E 4 10.719 -5.006 9.01 0.5 37.62 ? O3 PO4 710 A 1 HETATM 5 O O4 PO4 . . . E 4 9.241 -5.399 11.007 0.5 45.6 ? O4 PO4 710 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 252 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #