data_3E73 # _model_server_result.job_id k76fqqaAtMTm7D4yMmmk6Q _model_server_result.datetime_utc '2024-11-14 06:56:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3e73 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":502}' # _entry.id 3E73 # _exptl.entry_id 3E73 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 307.323 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLUTATHIONE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3E73 _cell.length_a 194.1 _cell.length_b 194.101 _cell.length_c 243.554 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3E73 _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 288 A CYS 276 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc2 A SG CYS 334 A CYS 322 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? metalc ? metalc3 A ND1 HIS 335 A HIS 323 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc4 C ZN ZN . A ZN 501 1_555 D SG2 GSH . A GSH 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc5 B SG CYS 288 B CYS 276 1_555 E ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? metalc ? metalc6 B SG CYS 334 B CYS 322 1_555 E ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc7 B ND1 HIS 335 B HIS 323 1_555 E ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc8 E ZN ZN . B ZN 502 1_555 F SG2 GSH . B GSH 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? # _chem_comp.formula 'C10 H17 N3 O6 S' _chem_comp.formula_weight 307.323 _chem_comp.id GSH _chem_comp.mon_nstd_flag . _chem_comp.name GLUTATHIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 CA1 GSH sing 129 n n N1 HN11 GSH sing 130 n n N1 HN12 GSH sing 131 n n CA1 C1 GSH sing 132 n n CA1 CB1 GSH sing 133 n n CA1 HA1 GSH sing 134 n n C1 O11 GSH doub 135 n n C1 O12 GSH sing 136 n n O12 H12 GSH sing 137 n n CB1 CG1 GSH sing 138 n n CB1 HB12 GSH sing 139 n n CB1 HB13 GSH sing 140 n n CG1 CD1 GSH sing 141 n n CG1 HG12 GSH sing 142 n n CG1 HG13 GSH sing 143 n n CD1 OE1 GSH doub 144 n n CD1 N2 GSH sing 145 n n N2 CA2 GSH sing 146 n n N2 HN2 GSH sing 147 n n CA2 C2 GSH sing 148 n n CA2 CB2 GSH sing 149 n n CA2 HA2 GSH sing 150 n n C2 O2 GSH doub 151 n n C2 N3 GSH sing 152 n n CB2 SG2 GSH sing 153 n n CB2 HB22 GSH sing 154 n n CB2 HB23 GSH sing 155 n n SG2 HSG GSH sing 156 n n N3 CA3 GSH sing 157 n n N3 HN3 GSH sing 158 n n CA3 C3 GSH sing 159 n n CA3 HA31 GSH sing 160 n n CA3 HA32 GSH sing 161 n n C3 O31 GSH doub 162 n n C3 O32 GSH sing 163 n n O32 H32 GSH sing 164 n n # _atom_sites.entry_id 3E73 _atom_sites.fract_transf_matrix[1][1] 0.005152 _atom_sites.fract_transf_matrix[1][2] 0.002974 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005949 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004106 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 501 501 ZN ZN . D 3 GSH A 1 502 502 GSH GSH . E 2 ZN B 1 502 502 ZN ZN . F 3 GSH B 1 503 503 GSH GSH . G 4 HOH A 1 503 503 HOH HOH . G 4 HOH A 2 504 504 HOH HOH . G 4 HOH A 3 505 505 HOH HOH . G 4 HOH A 4 506 506 HOH HOH . G 4 HOH A 5 507 507 HOH HOH . G 4 HOH A 6 508 508 HOH HOH . G 4 HOH A 7 509 509 HOH HOH . G 4 HOH A 8 510 510 HOH HOH . G 4 HOH A 9 513 513 HOH HOH . G 4 HOH A 10 514 514 HOH HOH . G 4 HOH A 11 515 515 HOH HOH . G 4 HOH A 12 516 516 HOH HOH . G 4 HOH A 13 517 517 HOH HOH . G 4 HOH A 14 518 518 HOH HOH . G 4 HOH A 15 519 519 HOH HOH . G 4 HOH A 16 520 520 HOH HOH . G 4 HOH A 17 521 521 HOH HOH . G 4 HOH A 18 522 522 HOH HOH . G 4 HOH A 19 523 523 HOH HOH . G 4 HOH A 20 524 524 HOH HOH . G 4 HOH A 21 525 525 HOH HOH . G 4 HOH A 22 526 526 HOH HOH . G 4 HOH A 23 527 527 HOH HOH . G 4 HOH A 24 528 528 HOH HOH . G 4 HOH A 25 529 529 HOH HOH . G 4 HOH A 26 530 530 HOH HOH . G 4 HOH A 27 531 531 HOH HOH . G 4 HOH A 28 532 532 HOH HOH . G 4 HOH A 29 533 533 HOH HOH . G 4 HOH A 30 534 534 HOH HOH . G 4 HOH A 31 535 535 HOH HOH . G 4 HOH A 32 536 536 HOH HOH . G 4 HOH A 33 537 537 HOH HOH . G 4 HOH A 34 538 538 HOH HOH . G 4 HOH A 35 539 539 HOH HOH . H 4 HOH B 1 512 512 HOH HOH . H 4 HOH B 2 513 513 HOH HOH . H 4 HOH B 3 514 514 HOH HOH . H 4 HOH B 4 515 515 HOH HOH . H 4 HOH B 5 516 516 HOH HOH . H 4 HOH B 6 517 517 HOH HOH . H 4 HOH B 7 518 518 HOH HOH . H 4 HOH B 8 519 519 HOH HOH . H 4 HOH B 9 520 520 HOH HOH . H 4 HOH B 10 521 521 HOH HOH . H 4 HOH B 11 522 522 HOH HOH . H 4 HOH B 12 523 523 HOH HOH . H 4 HOH B 13 524 524 HOH HOH . H 4 HOH B 14 525 525 HOH HOH . H 4 HOH B 15 526 526 HOH HOH . H 4 HOH B 16 528 528 HOH HOH . H 4 HOH B 17 529 529 HOH HOH . H 4 HOH B 18 530 530 HOH HOH . H 4 HOH B 19 531 531 HOH HOH . H 4 HOH B 20 532 532 HOH HOH . H 4 HOH B 21 533 533 HOH HOH . H 4 HOH B 22 534 534 HOH HOH . H 4 HOH B 23 535 535 HOH HOH . H 4 HOH B 24 536 536 HOH HOH . H 4 HOH B 25 537 537 HOH HOH . H 4 HOH B 26 538 538 HOH HOH . H 4 HOH B 27 539 539 HOH HOH . H 4 HOH B 28 540 540 HOH HOH . H 4 HOH B 29 541 541 HOH HOH . H 4 HOH B 30 542 542 HOH HOH . H 4 HOH B 31 543 543 HOH HOH . H 4 HOH B 32 544 544 HOH HOH . H 4 HOH B 33 545 545 HOH HOH . H 4 HOH B 34 546 546 HOH HOH . H 4 HOH B 35 547 547 HOH HOH . H 4 HOH B 36 548 548 HOH HOH . H 4 HOH B 37 549 549 HOH HOH . H 4 HOH B 38 550 550 HOH HOH . H 4 HOH B 39 551 551 HOH HOH . H 4 HOH B 40 552 552 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GSH . . . D 3 131.649 259.899 136.273 1 83.06 ? N1 GSH 502 A 1 HETATM 2 C CA1 GSH . . . D 3 130.991 258.688 136.723 1 83.5 ? CA1 GSH 502 A 1 HETATM 3 C C1 GSH . . . D 3 129.742 259.047 137.472 1 68.28 ? C1 GSH 502 A 1 HETATM 4 O O11 GSH . . . D 3 129.845 259.75 138.5 1 83.78 ? O11 GSH 502 A 1 HETATM 5 O O12 GSH . . . D 3 128.646 258.629 137.039 1 78.13 ? O12 GSH 502 A 1 HETATM 6 C CB1 GSH . . . D 3 131.928 257.911 137.64 1 82.92 ? CB1 GSH 502 A 1 HETATM 7 C CG1 GSH . . . D 3 132.791 256.94 136.843 1 82.09 ? CG1 GSH 502 A 1 HETATM 8 C CD1 GSH . . . D 3 133.085 255.681 137.651 1 81.64 ? CD1 GSH 502 A 1 HETATM 9 O OE1 GSH . . . D 3 131.896 254.89 137.751 1 84.5 ? OE1 GSH 502 A 1 HETATM 10 N N2 GSH . . . D 3 134.127 254.908 137.003 1 75.44 ? N2 GSH 502 A 1 HETATM 11 C CA2 GSH . . . D 3 133.901 254.347 135.685 1 76.41 ? CA2 GSH 502 A 1 HETATM 12 C C2 GSH . . . D 3 134.266 252.868 135.679 1 78.62 ? C2 GSH 502 A 1 HETATM 13 O O2 GSH . . . D 3 135.491 252.682 134.96 1 78.54 ? O2 GSH 502 A 1 HETATM 14 C CB2 GSH . . . D 3 134.71 255.114 134.646 1 73.98 ? CB2 GSH 502 A 1 HETATM 15 S SG2 GSH . . . D 3 134.14 254.804 132.957 1 69.89 ? SG2 GSH 502 A 1 HETATM 16 N N3 GSH . . . D 3 134.426 252.391 137.038 1 77.82 ? N3 GSH 502 A 1 HETATM 17 C CA3 GSH . . . D 3 135.753 252.157 137.573 1 76.34 ? CA3 GSH 502 A 1 HETATM 18 C C3 GSH . . . D 3 135.697 251.55 138.955 1 68.19 ? C3 GSH 502 A 1 HETATM 19 O O31 GSH . . . D 3 136.768 251.203 139.498 1 78.95 ? O31 GSH 502 A 1 HETATM 20 O O32 GSH . . . D 3 134.581 251.417 139.503 1 73.13 ? O32 GSH 502 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 41 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 20 #