data_3E73
#
_model_server_result.job_id            Z37KaeKS34H7bxeaQlOUvQ 
_model_server_result.datetime_utc      '2024-11-14 06:53:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3e73 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":503}' 
#
_entry.id    3E73 
#
_exptl.entry_id    3E73 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              307.323 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLUTATHIONE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3E73 
_cell.length_a            194.1 
_cell.length_b            194.101 
_cell.length_c            243.554 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3E73 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 288 A CYS 276 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? 
metalc ? metalc2 A SG CYS 334 A CYS 322 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? 
metalc ? metalc3 A ND1 HIS 335 A HIS 323 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
metalc ? metalc4 C ZN ZN . A ZN 501 1_555 D SG2 GSH . A GSH 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? 
metalc ? metalc5 B SG CYS 288 B CYS 276 1_555 E ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? 
metalc ? metalc6 B SG CYS 334 B CYS 322 1_555 E ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? 
metalc ? metalc7 B ND1 HIS 335 B HIS 323 1_555 E ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? 
metalc ? metalc8 E ZN ZN . B ZN 502 1_555 F SG2 GSH . B GSH 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? 
#
_chem_comp.formula           'C10 H17 N3 O6 S' 
_chem_comp.formula_weight    307.323 
_chem_comp.id                GSH 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLUTATHIONE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 CA1 GSH sing 129 n n 
N1 HN11 GSH sing 130 n n 
N1 HN12 GSH sing 131 n n 
CA1 C1 GSH sing 132 n n 
CA1 CB1 GSH sing 133 n n 
CA1 HA1 GSH sing 134 n n 
C1 O11 GSH doub 135 n n 
C1 O12 GSH sing 136 n n 
O12 H12 GSH sing 137 n n 
CB1 CG1 GSH sing 138 n n 
CB1 HB12 GSH sing 139 n n 
CB1 HB13 GSH sing 140 n n 
CG1 CD1 GSH sing 141 n n 
CG1 HG12 GSH sing 142 n n 
CG1 HG13 GSH sing 143 n n 
CD1 OE1 GSH doub 144 n n 
CD1 N2 GSH sing 145 n n 
N2 CA2 GSH sing 146 n n 
N2 HN2 GSH sing 147 n n 
CA2 C2 GSH sing 148 n n 
CA2 CB2 GSH sing 149 n n 
CA2 HA2 GSH sing 150 n n 
C2 O2 GSH doub 151 n n 
C2 N3 GSH sing 152 n n 
CB2 SG2 GSH sing 153 n n 
CB2 HB22 GSH sing 154 n n 
CB2 HB23 GSH sing 155 n n 
SG2 HSG GSH sing 156 n n 
N3 CA3 GSH sing 157 n n 
N3 HN3 GSH sing 158 n n 
CA3 C3 GSH sing 159 n n 
CA3 HA31 GSH sing 160 n n 
CA3 HA32 GSH sing 161 n n 
C3 O31 GSH doub 162 n n 
C3 O32 GSH sing 163 n n 
O32 H32 GSH sing 164 n n 
#
_atom_sites.entry_id                     3E73 
_atom_sites.fract_transf_matrix[1][1]    0.005152 
_atom_sites.fract_transf_matrix[1][2]    0.002974 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005949 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004106 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 501 501 ZN ZN . 
D 3 GSH A 1 502 502 GSH GSH . 
E 2 ZN B 1 502 502 ZN ZN . 
F 3 GSH B 1 503 503 GSH GSH . 
G 4 HOH A 1 503 503 HOH HOH . 
G 4 HOH A 2 504 504 HOH HOH . 
G 4 HOH A 3 505 505 HOH HOH . 
G 4 HOH A 4 506 506 HOH HOH . 
G 4 HOH A 5 507 507 HOH HOH . 
G 4 HOH A 6 508 508 HOH HOH . 
G 4 HOH A 7 509 509 HOH HOH . 
G 4 HOH A 8 510 510 HOH HOH . 
G 4 HOH A 9 513 513 HOH HOH . 
G 4 HOH A 10 514 514 HOH HOH . 
G 4 HOH A 11 515 515 HOH HOH . 
G 4 HOH A 12 516 516 HOH HOH . 
G 4 HOH A 13 517 517 HOH HOH . 
G 4 HOH A 14 518 518 HOH HOH . 
G 4 HOH A 15 519 519 HOH HOH . 
G 4 HOH A 16 520 520 HOH HOH . 
G 4 HOH A 17 521 521 HOH HOH . 
G 4 HOH A 18 522 522 HOH HOH . 
G 4 HOH A 19 523 523 HOH HOH . 
G 4 HOH A 20 524 524 HOH HOH . 
G 4 HOH A 21 525 525 HOH HOH . 
G 4 HOH A 22 526 526 HOH HOH . 
G 4 HOH A 23 527 527 HOH HOH . 
G 4 HOH A 24 528 528 HOH HOH . 
G 4 HOH A 25 529 529 HOH HOH . 
G 4 HOH A 26 530 530 HOH HOH . 
G 4 HOH A 27 531 531 HOH HOH . 
G 4 HOH A 28 532 532 HOH HOH . 
G 4 HOH A 29 533 533 HOH HOH . 
G 4 HOH A 30 534 534 HOH HOH . 
G 4 HOH A 31 535 535 HOH HOH . 
G 4 HOH A 32 536 536 HOH HOH . 
G 4 HOH A 33 537 537 HOH HOH . 
G 4 HOH A 34 538 538 HOH HOH . 
G 4 HOH A 35 539 539 HOH HOH . 
H 4 HOH B 1 512 512 HOH HOH . 
H 4 HOH B 2 513 513 HOH HOH . 
H 4 HOH B 3 514 514 HOH HOH . 
H 4 HOH B 4 515 515 HOH HOH . 
H 4 HOH B 5 516 516 HOH HOH . 
H 4 HOH B 6 517 517 HOH HOH . 
H 4 HOH B 7 518 518 HOH HOH . 
H 4 HOH B 8 519 519 HOH HOH . 
H 4 HOH B 9 520 520 HOH HOH . 
H 4 HOH B 10 521 521 HOH HOH . 
H 4 HOH B 11 522 522 HOH HOH . 
H 4 HOH B 12 523 523 HOH HOH . 
H 4 HOH B 13 524 524 HOH HOH . 
H 4 HOH B 14 525 525 HOH HOH . 
H 4 HOH B 15 526 526 HOH HOH . 
H 4 HOH B 16 528 528 HOH HOH . 
H 4 HOH B 17 529 529 HOH HOH . 
H 4 HOH B 18 530 530 HOH HOH . 
H 4 HOH B 19 531 531 HOH HOH . 
H 4 HOH B 20 532 532 HOH HOH . 
H 4 HOH B 21 533 533 HOH HOH . 
H 4 HOH B 22 534 534 HOH HOH . 
H 4 HOH B 23 535 535 HOH HOH . 
H 4 HOH B 24 536 536 HOH HOH . 
H 4 HOH B 25 537 537 HOH HOH . 
H 4 HOH B 26 538 538 HOH HOH . 
H 4 HOH B 27 539 539 HOH HOH . 
H 4 HOH B 28 540 540 HOH HOH . 
H 4 HOH B 29 541 541 HOH HOH . 
H 4 HOH B 30 542 542 HOH HOH . 
H 4 HOH B 31 543 543 HOH HOH . 
H 4 HOH B 32 544 544 HOH HOH . 
H 4 HOH B 33 545 545 HOH HOH . 
H 4 HOH B 34 546 546 HOH HOH . 
H 4 HOH B 35 547 547 HOH HOH . 
H 4 HOH B 36 548 548 HOH HOH . 
H 4 HOH B 37 549 549 HOH HOH . 
H 4 HOH B 38 550 550 HOH HOH . 
H 4 HOH B 39 551 551 HOH HOH . 
H 4 HOH B 40 552 552 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 GSH . . . F 3 165.798 233.83 158.651 1 75.2 ? N1 GSH 503 B 1 
HETATM 2 C CA1 GSH . . . F 3 165.959 233.481 157.253 1 62.83 ? CA1 GSH 503 B 1 
HETATM 3 C C1 GSH . . . F 3 167.42 233.373 156.929 1 89.63 ? C1 GSH 503 B 1 
HETATM 4 O O11 GSH . . . F 3 168.067 232.415 157.406 1 90.65 ? O11 GSH 503 B 1 
HETATM 5 O O12 GSH . . . F 3 167.934 234.244 156.195 1 90.74 ? O12 GSH 503 B 1 
HETATM 6 C CB1 GSH . . . F 3 165.324 234.559 156.383 1 85.73 ? CB1 GSH 503 B 1 
HETATM 7 C CG1 GSH . . . F 3 164.069 234.037 155.694 1 85.89 ? CG1 GSH 503 B 1 
HETATM 8 C CD1 GSH . . . F 3 163.723 234.883 154.475 1 83.69 ? CD1 GSH 503 B 1 
HETATM 9 O OE1 GSH . . . F 3 164.598 234.544 153.394 1 83.21 ? OE1 GSH 503 B 1 
HETATM 10 N N2 GSH . . . F 3 162.349 234.642 154.079 1 82.76 ? N2 GSH 503 B 1 
HETATM 11 C CA2 GSH . . . F 3 161.473 233.867 154.936 1 80.01 ? CA2 GSH 503 B 1 
HETATM 12 C C2 GSH . . . F 3 160.023 234.051 154.503 1 79.61 ? C2 GSH 503 B 1 
HETATM 13 O O2 GSH . . . F 3 159.495 235.241 155.098 1 81.87 ? O2 GSH 503 B 1 
HETATM 14 C CB2 GSH . . . F 3 161.666 234.281 156.389 1 68.21 ? CB2 GSH 503 B 1 
HETATM 15 S SG2 GSH . . . F 3 160.153 234.1 157.368 1 79.1 ? SG2 GSH 503 B 1 
HETATM 16 N N3 GSH . . . F 3 159.947 234.158 153.059 1 78.51 ? N3 GSH 503 B 1 
HETATM 17 C CA3 GSH . . . F 3 160.782 235.114 152.358 1 78.16 ? CA3 GSH 503 B 1 
HETATM 18 C C3 GSH . . . F 3 161 234.711 150.919 1 79.99 ? C3 GSH 503 B 1 
HETATM 19 O O31 GSH . . . F 3 160.859 235.578 150.029 1 79.11 ? O31 GSH 503 B 1 
HETATM 20 O O32 GSH . . . F 3 161.312 233.526 150.672 1 80.73 ? O32 GSH 503 B 1 
#
_model_server_stats.io_time_ms              53 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    28 
_model_server_stats.query_time_ms           338 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           20 
#