data_3E7C
#
_model_server_result.job_id            uDXBk4p_xeGshHWMqxIt_Q 
_model_server_result.datetime_utc      '2024-12-02 22:44:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3e7c 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":778}' 
#
_entry.id    3E7C 
#
_exptl.entry_id    3E7C 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3E7C 
_cell.length_a            126.654 
_cell.length_b            126.654 
_cell.length_c            78.991 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 3E7C 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        169 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA tetrameric 4 author_and_software_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
PISA dimeric 2 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K,L 1 1 
A,B,E,F,J,K 2 1 
C,D,G,H,I,L 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 H N N 
? 4 I N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 189 n n 
C1 C2 GOL sing 190 n n 
C1 H11 GOL sing 191 n n 
C1 H12 GOL sing 192 n n 
O1 HO1 GOL sing 193 n n 
C2 O2 GOL sing 194 n n 
C2 C3 GOL sing 195 n n 
C2 H2 GOL sing 196 n n 
O2 HO2 GOL sing 197 n n 
C3 O3 GOL sing 198 n n 
C3 H31 GOL sing 199 n n 
C3 H32 GOL sing 200 n n 
O3 HO3 GOL sing 201 n n 
#
_atom_sites.entry_id                     3E7C 
_atom_sites.fract_transf_matrix[1][1]    0.007896 
_atom_sites.fract_transf_matrix[1][2]    0.004558 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009117 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01266 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 866 A 1 1 1 866 866 . 
F 4 GOL A 1 778 778 GOL GOL . 
G 3 866 B 1 2 2 866 866 . 
H 4 GOL B 1 3 3 GOL GOL . 
I 4 GOL B 1 778 778 GOL GOL . 
J 5 HOH A 1 779 779 HOH HOH . 
J 5 HOH A 2 780 780 HOH HOH . 
J 5 HOH A 3 781 781 HOH HOH . 
J 5 HOH A 4 782 782 HOH HOH . 
J 5 HOH A 5 783 783 HOH HOH . 
J 5 HOH A 6 784 784 HOH HOH . 
J 5 HOH A 7 785 785 HOH HOH . 
J 5 HOH A 8 786 786 HOH HOH . 
J 5 HOH A 9 787 787 HOH HOH . 
J 5 HOH A 10 788 788 HOH HOH . 
J 5 HOH A 11 789 789 HOH HOH . 
J 5 HOH A 12 790 790 HOH HOH . 
J 5 HOH A 13 791 791 HOH HOH . 
J 5 HOH A 14 792 792 HOH HOH . 
J 5 HOH A 15 793 793 HOH HOH . 
J 5 HOH A 16 794 794 HOH HOH . 
J 5 HOH A 17 795 795 HOH HOH . 
J 5 HOH A 18 796 796 HOH HOH . 
J 5 HOH A 19 797 797 HOH HOH . 
J 5 HOH A 20 798 798 HOH HOH . 
J 5 HOH A 21 799 799 HOH HOH . 
J 5 HOH A 22 800 800 HOH HOH . 
J 5 HOH A 23 801 801 HOH HOH . 
J 5 HOH A 24 802 802 HOH HOH . 
J 5 HOH A 25 803 803 HOH HOH . 
J 5 HOH A 26 804 804 HOH HOH . 
J 5 HOH A 27 806 806 HOH HOH . 
J 5 HOH A 28 807 807 HOH HOH . 
J 5 HOH A 29 808 808 HOH HOH . 
J 5 HOH A 30 809 809 HOH HOH . 
J 5 HOH A 31 810 810 HOH HOH . 
J 5 HOH A 32 811 811 HOH HOH . 
J 5 HOH A 33 812 812 HOH HOH . 
J 5 HOH A 34 813 813 HOH HOH . 
J 5 HOH A 35 814 814 HOH HOH . 
J 5 HOH A 36 815 815 HOH HOH . 
J 5 HOH A 37 816 816 HOH HOH . 
J 5 HOH A 38 817 817 HOH HOH . 
J 5 HOH A 39 818 818 HOH HOH . 
K 5 HOH H 1 36 36 HOH HOH . 
K 5 HOH H 2 46 46 HOH HOH . 
L 5 HOH B 1 5 5 HOH HOH . 
L 5 HOH B 2 6 6 HOH HOH . 
L 5 HOH B 3 9 9 HOH HOH . 
L 5 HOH B 4 10 10 HOH HOH . 
L 5 HOH B 5 11 11 HOH HOH . 
L 5 HOH B 6 12 12 HOH HOH . 
L 5 HOH B 7 13 13 HOH HOH . 
L 5 HOH B 8 16 16 HOH HOH . 
L 5 HOH B 9 19 19 HOH HOH . 
L 5 HOH B 10 21 21 HOH HOH . 
L 5 HOH B 11 24 24 HOH HOH . 
L 5 HOH B 12 25 25 HOH HOH . 
L 5 HOH B 13 26 26 HOH HOH . 
L 5 HOH B 14 27 27 HOH HOH . 
L 5 HOH B 15 30 30 HOH HOH . 
L 5 HOH B 16 32 32 HOH HOH . 
L 5 HOH B 17 34 34 HOH HOH . 
L 5 HOH B 18 38 38 HOH HOH . 
L 5 HOH B 19 40 40 HOH HOH . 
L 5 HOH B 20 41 41 HOH HOH . 
L 5 HOH B 21 43 43 HOH HOH . 
L 5 HOH B 22 45 45 HOH HOH . 
L 5 HOH B 23 47 47 HOH HOH . 
L 5 HOH B 24 53 53 HOH HOH . 
L 5 HOH B 25 54 54 HOH HOH . 
L 5 HOH B 26 55 55 HOH HOH . 
L 5 HOH B 27 56 56 HOH HOH . 
L 5 HOH B 28 57 57 HOH HOH . 
L 5 HOH B 29 58 58 HOH HOH . 
L 5 HOH B 30 61 61 HOH HOH . 
L 5 HOH B 31 62 62 HOH HOH . 
L 5 HOH B 32 63 63 HOH HOH . 
L 5 HOH B 33 66 66 HOH HOH . 
L 5 HOH B 34 67 67 HOH HOH . 
L 5 HOH B 35 68 68 HOH HOH . 
L 5 HOH B 36 69 69 HOH HOH . 
L 5 HOH B 37 70 70 HOH HOH . 
L 5 HOH B 38 71 71 HOH HOH . 
L 5 HOH B 39 72 72 HOH HOH . 
L 5 HOH B 40 73 73 HOH HOH . 
L 5 HOH B 41 75 75 HOH HOH . 
L 5 HOH B 42 77 77 HOH HOH . 
L 5 HOH B 43 79 79 HOH HOH . 
L 5 HOH B 44 80 80 HOH HOH . 
L 5 HOH B 45 82 82 HOH HOH . 
L 5 HOH B 46 88 88 HOH HOH . 
L 5 HOH B 47 89 89 HOH HOH . 
L 5 HOH B 48 90 90 HOH HOH . 
L 5 HOH B 49 91 91 HOH HOH . 
L 5 HOH B 50 92 92 HOH HOH . 
L 5 HOH B 51 93 93 HOH HOH . 
L 5 HOH B 52 805 805 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . I 4 85.198 5.06 -11.921 1 83.68 ? C1 GOL 778 B 1 
HETATM 2 O O1 GOL . . . I 4 84.513 4.852 -13.14 1 74.38 ? O1 GOL 778 B 1 
HETATM 3 C C2 GOL . . . I 4 86.707 5.188 -12.143 1 89.68 ? C2 GOL 778 B 1 
HETATM 4 O O2 GOL . . . I 4 87.151 6.457 -11.717 1 91.12 ? O2 GOL 778 B 1 
HETATM 5 C C3 GOL . . . I 4 87.07 4.998 -13.613 1 94.57 ? C3 GOL 778 B 1 
HETATM 6 O O3 GOL . . . I 4 88.463 4.805 -13.737 1 99.57 ? O3 GOL 778 B 1 
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_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           267 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           6 
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