data_3E7S
#
_model_server_result.job_id            vpJFcHxanIK7kt35Jj4aNg 
_model_server_result.datetime_utc      '2024-11-13 19:03:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3e7s 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":904}' 
#
_entry.id    3E7S 
#
_exptl.entry_id    3E7S 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              263.335 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ETHYL 4-[(4-METHYLPYRIDIN-2-YL)AMINO]PIPERIDINE-1-CARBOXYLATE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3E7S 
_cell.length_a            58.93 
_cell.length_b            104.37 
_cell.length_c            156.7 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3E7S 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 E N N 
? 5 F N N 
? 5 H N N 
? 5 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 40 A CYS 93 1_555 C ZN ZN . A ZN 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? 
metalc ? metalc2 A SG CYS 45 A CYS 98 1_555 C ZN ZN . A ZN 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? 
metalc ? metalc3 C ZN ZN . A ZN 903 1_555 B SG CYS 40 B CYS 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? 
metalc ? metalc4 C ZN ZN . A ZN 903 1_555 B SG CYS 45 B CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? 
metalc ? metalc5 B SG CYS 130 B CYS 183 1_555 G FE HEC . B HEC 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? 
#
_chem_comp.formula           'C14 H21 N3 O2' 
_chem_comp.formula_weight    263.335 
_chem_comp.id                AT2 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ETHYL 4-[(4-METHYLPYRIDIN-2-YL)AMINO]PIPERIDINE-1-CARBOXYLATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 AT2 sing 70 n n 
C1 H11 AT2 sing 71 n n 
C1 H12 AT2 sing 72 n n 
C1 H13 AT2 sing 73 n n 
C2 C3 AT2 sing 74 n y 
C2 C7 AT2 doub 75 n y 
C3 C4 AT2 doub 76 n y 
C3 H3 AT2 sing 77 n n 
C4 N5 AT2 sing 78 n y 
C4 H4 AT2 sing 79 n n 
C6 C7 AT2 sing 80 n y 
C6 N5 AT2 doub 81 n y 
C6 N8 AT2 sing 82 n n 
C7 H7 AT2 sing 83 n n 
C9 C10 AT2 sing 84 n n 
C9 N8 AT2 sing 85 n n 
C9 C14 AT2 sing 86 n n 
C9 H9 AT2 sing 87 n n 
C10 C11 AT2 sing 88 n n 
C10 H101 AT2 sing 89 n n 
C10 H102 AT2 sing 90 n n 
C11 N12 AT2 sing 91 n n 
C11 H111 AT2 sing 92 n n 
C11 H112 AT2 sing 93 n n 
N8 HN8 AT2 sing 94 n n 
N12 C13 AT2 sing 95 n n 
N12 C15 AT2 sing 96 n n 
C13 C14 AT2 sing 97 n n 
C13 H131 AT2 sing 98 n n 
C13 H132 AT2 sing 99 n n 
C14 H141 AT2 sing 100 n n 
C14 H142 AT2 sing 101 n n 
C15 O16 AT2 doub 102 n n 
C15 O17 AT2 sing 103 n n 
O17 C18 AT2 sing 104 n n 
C18 C19 AT2 sing 105 n n 
C18 H181 AT2 sing 106 n n 
C18 H182 AT2 sing 107 n n 
C19 H191 AT2 sing 108 n n 
C19 H192 AT2 sing 109 n n 
C19 H193 AT2 sing 110 n n 
#
_atom_sites.entry_id                     3E7S 
_atom_sites.fract_transf_matrix[1][1]    0.016969 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009581 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006382 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 ZN A 1 903 903 ZN ZN . 
D 4 HEC A 1 901 901 HEC HEC . 
E 5 AT2 A 1 904 904 AT2 AT2 . 
F 5 AT2 A 1 905 905 AT2 AT2 . 
G 4 HEC B 1 902 902 HEC HEC . 
H 5 AT2 B 1 906 906 AT2 AT2 . 
I 5 AT2 B 1 907 907 AT2 AT2 . 
J 6 HOH A 1 906 1 HOH HOH . 
J 6 HOH A 2 907 2 HOH HOH . 
J 6 HOH A 3 908 3 HOH HOH . 
J 6 HOH A 4 909 4 HOH HOH . 
J 6 HOH A 5 910 5 HOH HOH . 
J 6 HOH A 6 911 6 HOH HOH . 
J 6 HOH A 7 912 7 HOH HOH . 
J 6 HOH A 8 913 8 HOH HOH . 
J 6 HOH A 9 914 9 HOH HOH . 
J 6 HOH A 10 915 10 HOH HOH . 
J 6 HOH A 11 916 12 HOH HOH . 
J 6 HOH A 12 917 13 HOH HOH . 
J 6 HOH A 13 918 14 HOH HOH . 
J 6 HOH A 14 919 15 HOH HOH . 
J 6 HOH A 15 920 16 HOH HOH . 
J 6 HOH A 16 921 17 HOH HOH . 
J 6 HOH A 17 922 18 HOH HOH . 
J 6 HOH A 18 923 19 HOH HOH . 
J 6 HOH A 19 924 20 HOH HOH . 
J 6 HOH A 20 925 21 HOH HOH . 
J 6 HOH A 21 926 22 HOH HOH . 
J 6 HOH A 22 927 23 HOH HOH . 
J 6 HOH A 23 928 24 HOH HOH . 
J 6 HOH A 24 929 25 HOH HOH . 
J 6 HOH A 25 930 26 HOH HOH . 
J 6 HOH A 26 931 27 HOH HOH . 
J 6 HOH A 27 932 28 HOH HOH . 
J 6 HOH A 28 933 29 HOH HOH . 
J 6 HOH A 29 934 30 HOH HOH . 
J 6 HOH A 30 935 31 HOH HOH . 
J 6 HOH A 31 936 32 HOH HOH . 
J 6 HOH A 32 937 33 HOH HOH . 
J 6 HOH A 33 938 34 HOH HOH . 
J 6 HOH A 34 939 35 HOH HOH . 
J 6 HOH A 35 940 36 HOH HOH . 
J 6 HOH A 36 941 37 HOH HOH . 
J 6 HOH A 37 942 38 HOH HOH . 
J 6 HOH A 38 943 39 HOH HOH . 
J 6 HOH A 39 944 40 HOH HOH . 
J 6 HOH A 40 945 41 HOH HOH . 
J 6 HOH A 41 946 42 HOH HOH . 
J 6 HOH A 42 947 43 HOH HOH . 
J 6 HOH A 43 948 44 HOH HOH . 
J 6 HOH A 44 949 45 HOH HOH . 
J 6 HOH A 45 950 46 HOH HOH . 
J 6 HOH A 46 951 47 HOH HOH . 
J 6 HOH A 47 952 48 HOH HOH . 
J 6 HOH A 48 953 50 HOH HOH . 
J 6 HOH A 49 954 51 HOH HOH . 
J 6 HOH A 50 955 52 HOH HOH . 
J 6 HOH A 51 956 54 HOH HOH . 
J 6 HOH A 52 957 55 HOH HOH . 
J 6 HOH A 53 958 56 HOH HOH . 
J 6 HOH A 54 959 57 HOH HOH . 
J 6 HOH A 55 960 58 HOH HOH . 
J 6 HOH A 56 961 59 HOH HOH . 
J 6 HOH A 57 962 60 HOH HOH . 
J 6 HOH A 58 963 62 HOH HOH . 
J 6 HOH A 59 964 63 HOH HOH . 
J 6 HOH A 60 965 64 HOH HOH . 
J 6 HOH A 61 966 66 HOH HOH . 
J 6 HOH A 62 967 67 HOH HOH . 
J 6 HOH A 63 968 68 HOH HOH . 
J 6 HOH A 64 969 69 HOH HOH . 
J 6 HOH A 65 970 70 HOH HOH . 
J 6 HOH A 66 971 71 HOH HOH . 
J 6 HOH A 67 972 72 HOH HOH . 
J 6 HOH A 68 973 73 HOH HOH . 
J 6 HOH A 69 974 74 HOH HOH . 
J 6 HOH A 70 975 75 HOH HOH . 
J 6 HOH A 71 976 76 HOH HOH . 
J 6 HOH A 72 977 119 HOH HOH . 
J 6 HOH A 73 978 175 HOH HOH . 
J 6 HOH A 74 979 184 HOH HOH . 
K 6 HOH B 1 908 11 HOH HOH . 
K 6 HOH B 2 909 49 HOH HOH . 
K 6 HOH B 3 910 53 HOH HOH . 
K 6 HOH B 4 911 61 HOH HOH . 
K 6 HOH B 5 912 65 HOH HOH . 
K 6 HOH B 6 913 77 HOH HOH . 
K 6 HOH B 7 914 78 HOH HOH . 
K 6 HOH B 8 915 79 HOH HOH . 
K 6 HOH B 9 916 80 HOH HOH . 
K 6 HOH B 10 917 81 HOH HOH . 
K 6 HOH B 11 918 82 HOH HOH . 
K 6 HOH B 12 919 83 HOH HOH . 
K 6 HOH B 13 920 101 HOH HOH . 
K 6 HOH B 14 921 102 HOH HOH . 
K 6 HOH B 15 922 103 HOH HOH . 
K 6 HOH B 16 923 104 HOH HOH . 
K 6 HOH B 17 924 105 HOH HOH . 
K 6 HOH B 18 925 106 HOH HOH . 
K 6 HOH B 19 926 107 HOH HOH . 
K 6 HOH B 20 927 108 HOH HOH . 
K 6 HOH B 21 928 109 HOH HOH . 
K 6 HOH B 22 929 110 HOH HOH . 
K 6 HOH B 23 930 111 HOH HOH . 
K 6 HOH B 24 931 112 HOH HOH . 
K 6 HOH B 25 932 113 HOH HOH . 
K 6 HOH B 26 933 114 HOH HOH . 
K 6 HOH B 27 934 115 HOH HOH . 
K 6 HOH B 28 935 116 HOH HOH . 
K 6 HOH B 29 936 117 HOH HOH . 
K 6 HOH B 30 937 118 HOH HOH . 
K 6 HOH B 31 938 120 HOH HOH . 
K 6 HOH B 32 939 121 HOH HOH . 
K 6 HOH B 33 940 122 HOH HOH . 
K 6 HOH B 34 941 123 HOH HOH . 
K 6 HOH B 35 942 124 HOH HOH . 
K 6 HOH B 36 943 125 HOH HOH . 
K 6 HOH B 37 944 126 HOH HOH . 
K 6 HOH B 38 945 127 HOH HOH . 
K 6 HOH B 39 946 128 HOH HOH . 
K 6 HOH B 40 947 129 HOH HOH . 
K 6 HOH B 41 948 130 HOH HOH . 
K 6 HOH B 42 949 131 HOH HOH . 
K 6 HOH B 43 950 132 HOH HOH . 
K 6 HOH B 44 951 133 HOH HOH . 
K 6 HOH B 45 952 134 HOH HOH . 
K 6 HOH B 46 953 135 HOH HOH . 
K 6 HOH B 47 954 136 HOH HOH . 
K 6 HOH B 48 955 137 HOH HOH . 
K 6 HOH B 49 956 138 HOH HOH . 
K 6 HOH B 50 957 139 HOH HOH . 
K 6 HOH B 51 958 140 HOH HOH . 
K 6 HOH B 52 959 141 HOH HOH . 
K 6 HOH B 53 960 142 HOH HOH . 
K 6 HOH B 54 961 143 HOH HOH . 
K 6 HOH B 55 962 144 HOH HOH . 
K 6 HOH B 56 963 145 HOH HOH . 
K 6 HOH B 57 964 146 HOH HOH . 
K 6 HOH B 58 965 147 HOH HOH . 
K 6 HOH B 59 966 148 HOH HOH . 
K 6 HOH B 60 967 149 HOH HOH . 
K 6 HOH B 61 968 150 HOH HOH . 
K 6 HOH B 62 969 151 HOH HOH . 
K 6 HOH B 63 970 152 HOH HOH . 
K 6 HOH B 64 971 153 HOH HOH . 
K 6 HOH B 65 972 154 HOH HOH . 
K 6 HOH B 66 973 155 HOH HOH . 
K 6 HOH B 67 974 156 HOH HOH . 
K 6 HOH B 68 975 157 HOH HOH . 
K 6 HOH B 69 976 158 HOH HOH . 
K 6 HOH B 70 977 159 HOH HOH . 
K 6 HOH B 71 978 160 HOH HOH . 
K 6 HOH B 72 979 161 HOH HOH . 
K 6 HOH B 73 980 162 HOH HOH . 
K 6 HOH B 74 981 163 HOH HOH . 
K 6 HOH B 75 982 164 HOH HOH . 
K 6 HOH B 76 983 165 HOH HOH . 
K 6 HOH B 77 984 166 HOH HOH . 
K 6 HOH B 78 985 167 HOH HOH . 
K 6 HOH B 79 986 169 HOH HOH . 
K 6 HOH B 80 987 170 HOH HOH . 
K 6 HOH B 81 988 171 HOH HOH . 
K 6 HOH B 82 989 172 HOH HOH . 
K 6 HOH B 83 990 173 HOH HOH . 
K 6 HOH B 84 991 174 HOH HOH . 
K 6 HOH B 85 992 176 HOH HOH . 
K 6 HOH B 86 993 185 HOH HOH . 
K 6 HOH B 87 994 186 HOH HOH . 
K 6 HOH B 88 995 187 HOH HOH . 
K 6 HOH B 89 996 188 HOH HOH . 
K 6 HOH B 90 997 189 HOH HOH . 
K 6 HOH B 91 998 190 HOH HOH . 
K 6 HOH B 92 999 191 HOH HOH . 
K 6 HOH B 93 1000 192 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 AT2 . . . E 5 1.799 44.582 8.826 1 21.17 ? C1 AT2 904 A 1 
HETATM 2 C C2 AT2 . . . E 5 1.047 44.19 10.055 1 21.87 ? C2 AT2 904 A 1 
HETATM 3 C C3 AT2 . . . E 5 0.635 42.862 10.281 1 22.31 ? C3 AT2 904 A 1 
HETATM 4 C C4 AT2 . . . E 5 -0.119 42.529 11.534 1 25.84 ? C4 AT2 904 A 1 
HETATM 5 C C6 AT2 . . . E 5 0.04 44.984 12.196 1 22.31 ? C6 AT2 904 A 1 
HETATM 6 C C7 AT2 . . . E 5 0.777 45.248 10.954 1 22.29 ? C7 AT2 904 A 1 
HETATM 7 C C9 AT2 . . . E 5 -0.122 47.263 13.222 1 19.99 ? C9 AT2 904 A 1 
HETATM 8 C C10 AT2 . . . E 5 -1.367 47.787 14.04 1 17.75 ? C10 AT2 904 A 1 
HETATM 9 C C11 AT2 . . . E 5 -1.297 49.372 13.735 1 16.43 ? C11 AT2 904 A 1 
HETATM 10 N N5 AT2 . . . E 5 -0.376 43.638 12.443 1 24.84 ? N5 AT2 904 A 1 
HETATM 11 N N8 AT2 . . . E 5 -0.349 45.839 13.18 1 22.05 ? N8 AT2 904 A 1 
HETATM 12 N N12 AT2 . . . E 5 0.031 49.898 14.271 1 19.03 ? N12 AT2 904 A 1 
HETATM 13 C C13 AT2 . . . E 5 1.294 49.243 13.671 1 18.57 ? C13 AT2 904 A 1 
HETATM 14 C C14 AT2 . . . E 5 1.221 47.735 13.865 1 20.78 ? C14 AT2 904 A 1 
HETATM 15 C C15 AT2 . . . E 5 0.057 50.888 15.158 1 21.08 ? C15 AT2 904 A 1 
HETATM 16 O O16 AT2 . . . E 5 -1.039 51.347 15.571 1 26.13 ? O16 AT2 904 A 1 
HETATM 17 O O17 AT2 . . . E 5 1.255 51.369 15.505 1 26.69 ? O17 AT2 904 A 1 
HETATM 18 C C18 AT2 . . . E 5 1.372 52.536 16.413 1 24.31 ? C18 AT2 904 A 1 
HETATM 19 C C19 AT2 . . . E 5 2.755 53.013 16.628 1 25.82 ? C19 AT2 904 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           295 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           19 
#