data_3E94 # _model_server_result.job_id xeMmr-arx5c55jVnC3JndA _model_server_result.datetime_utc '2024-11-25 02:40:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3e94 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1}' # _entry.id 3E94 # _exptl.entry_id 3E94 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 290.053 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description tributylstannanyl _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3E94 _cell.length_a 64.028 _cell.length_b 64.028 _cell.length_c 111.882 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3E94 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -y,-x,-z+1/2 0 -1 0 -1 0 0 0 0 -1 0 0 55.941 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C SN1 TBY . A TBY 1 1_555 A SG CYS 214 A CYS 432 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.434 ? metalc ? metalc2 C SN1 TBY . A TBY 1 1_555 A SG CYS 214 A CYS 432 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.443 ? # _chem_comp.formula 'C12 H27 Sn' _chem_comp.formula_weight 290.053 _chem_comp.id TBY _chem_comp.mon_nstd_flag . _chem_comp.name tributylstannanyl _chem_comp.type non-polymer _chem_comp.pdbx_synonyms tributyltin # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C11 C10 TBY sing 296 n n C11 C12 TBY sing 297 n n C10 SN1 TBY sing 298 n n SN1 C2 TBY sing 299 n n SN1 C6 TBY sing 300 n n C2 C3 TBY sing 301 n n C3 C4 TBY sing 302 n n C4 C5 TBY sing 303 n n C6 C7 TBY sing 304 n n C7 C8 TBY sing 305 n n C8 C9 TBY sing 306 n n C12 C13 TBY sing 307 n n C11 H11 TBY sing 308 n n C11 H11A TBY sing 309 n n C10 H10 TBY sing 310 n n C10 H10A TBY sing 311 n n C2 H2 TBY sing 312 n n C2 H2A TBY sing 313 n n C3 H3 TBY sing 314 n n C3 H3A TBY sing 315 n n C4 H4 TBY sing 316 n n C4 H4A TBY sing 317 n n C5 H5 TBY sing 318 n n C5 H5A TBY sing 319 n n C5 H5B TBY sing 320 n n C6 H6 TBY sing 321 n n C6 H6A TBY sing 322 n n C7 H7 TBY sing 323 n n C7 H7A TBY sing 324 n n C8 H8 TBY sing 325 n n C8 H8A TBY sing 326 n n C9 H9 TBY sing 327 n n C9 H9A TBY sing 328 n n C9 H9B TBY sing 329 n n C12 H12 TBY sing 330 n n C12 H12A TBY sing 331 n n C13 H13 TBY sing 332 n n C13 H13A TBY sing 333 n n C13 H13B TBY sing 334 n n # _atom_sites.entry_id 3E94 _atom_sites.fract_transf_matrix[1][1] 0.015618 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015618 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008938 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 TBY A 1 1 1 TBY TBY . D 4 ACT A 1 463 463 ACT ACT . E 5 HOH A 1 464 464 HOH HOH . E 5 HOH A 2 465 465 HOH HOH . E 5 HOH A 3 466 466 HOH HOH . E 5 HOH A 4 467 467 HOH HOH . E 5 HOH A 5 468 468 HOH HOH . E 5 HOH A 6 469 469 HOH HOH . E 5 HOH A 7 470 470 HOH HOH . E 5 HOH A 8 471 471 HOH HOH . E 5 HOH A 9 472 472 HOH HOH . E 5 HOH A 10 473 473 HOH HOH . E 5 HOH A 11 474 474 HOH HOH . E 5 HOH A 12 475 475 HOH HOH . E 5 HOH A 13 476 476 HOH HOH . E 5 HOH A 14 477 477 HOH HOH . E 5 HOH A 15 478 478 HOH HOH . E 5 HOH A 16 479 479 HOH HOH . E 5 HOH A 17 480 480 HOH HOH . E 5 HOH A 18 481 481 HOH HOH . E 5 HOH A 19 483 483 HOH HOH . E 5 HOH A 20 484 484 HOH HOH . E 5 HOH A 21 485 485 HOH HOH . E 5 HOH A 22 486 486 HOH HOH . E 5 HOH A 23 487 487 HOH HOH . E 5 HOH A 24 488 488 HOH HOH . E 5 HOH A 25 489 489 HOH HOH . E 5 HOH A 26 490 490 HOH HOH . E 5 HOH A 27 491 491 HOH HOH . E 5 HOH A 28 492 492 HOH HOH . E 5 HOH A 29 493 493 HOH HOH . E 5 HOH A 30 494 494 HOH HOH . E 5 HOH A 31 495 495 HOH HOH . E 5 HOH A 32 496 496 HOH HOH . E 5 HOH A 33 497 497 HOH HOH . E 5 HOH A 34 498 498 HOH HOH . E 5 HOH A 35 499 499 HOH HOH . E 5 HOH A 36 500 500 HOH HOH . E 5 HOH A 37 501 501 HOH HOH . E 5 HOH A 38 502 502 HOH HOH . E 5 HOH A 39 503 503 HOH HOH . E 5 HOH A 40 504 504 HOH HOH . E 5 HOH A 41 505 505 HOH HOH . E 5 HOH A 42 506 506 HOH HOH . E 5 HOH A 43 507 507 HOH HOH . E 5 HOH A 44 508 508 HOH HOH . E 5 HOH A 45 509 509 HOH HOH . E 5 HOH A 46 510 510 HOH HOH . E 5 HOH A 47 511 511 HOH HOH . E 5 HOH A 48 512 512 HOH HOH . E 5 HOH A 49 513 513 HOH HOH . E 5 HOH A 50 514 514 HOH HOH . E 5 HOH A 51 515 515 HOH HOH . E 5 HOH A 52 516 516 HOH HOH . E 5 HOH A 53 517 517 HOH HOH . E 5 HOH A 54 518 518 HOH HOH . E 5 HOH A 55 519 519 HOH HOH . E 5 HOH A 56 520 520 HOH HOH . E 5 HOH A 57 521 521 HOH HOH . E 5 HOH A 58 522 522 HOH HOH . E 5 HOH A 59 523 523 HOH HOH . E 5 HOH A 60 524 524 HOH HOH . E 5 HOH A 61 525 525 HOH HOH . E 5 HOH A 62 526 526 HOH HOH . E 5 HOH A 63 527 527 HOH HOH . E 5 HOH A 64 528 528 HOH HOH . E 5 HOH A 65 529 529 HOH HOH . E 5 HOH A 66 530 530 HOH HOH . E 5 HOH A 67 531 531 HOH HOH . E 5 HOH A 68 532 532 HOH HOH . E 5 HOH A 69 533 533 HOH HOH . E 5 HOH A 70 534 534 HOH HOH . E 5 HOH A 71 535 535 HOH HOH . E 5 HOH A 72 537 537 HOH HOH . E 5 HOH A 73 538 538 HOH HOH . E 5 HOH A 74 539 539 HOH HOH . E 5 HOH A 75 540 540 HOH HOH . E 5 HOH A 76 541 541 HOH HOH . E 5 HOH A 77 542 542 HOH HOH . E 5 HOH A 78 543 543 HOH HOH . E 5 HOH A 79 544 544 HOH HOH . E 5 HOH A 80 546 546 HOH HOH . E 5 HOH A 81 547 547 HOH HOH . E 5 HOH A 82 548 548 HOH HOH . E 5 HOH A 83 549 549 HOH HOH . E 5 HOH A 84 550 550 HOH HOH . E 5 HOH A 85 551 551 HOH HOH . E 5 HOH A 86 552 552 HOH HOH . E 5 HOH A 87 553 553 HOH HOH . E 5 HOH A 88 554 554 HOH HOH . E 5 HOH A 89 555 555 HOH HOH . E 5 HOH A 90 556 556 HOH HOH . E 5 HOH A 91 557 557 HOH HOH . E 5 HOH A 92 558 558 HOH HOH . E 5 HOH A 93 559 559 HOH HOH . E 5 HOH A 94 560 560 HOH HOH . E 5 HOH A 95 561 561 HOH HOH . E 5 HOH A 96 562 562 HOH HOH . E 5 HOH A 97 563 563 HOH HOH . E 5 HOH A 98 564 564 HOH HOH . E 5 HOH A 99 565 565 HOH HOH . E 5 HOH A 100 566 566 HOH HOH . E 5 HOH A 101 567 567 HOH HOH . E 5 HOH A 102 568 568 HOH HOH . E 5 HOH A 103 569 569 HOH HOH . E 5 HOH A 104 570 570 HOH HOH . E 5 HOH A 105 572 572 HOH HOH . E 5 HOH A 106 573 573 HOH HOH . E 5 HOH A 107 574 574 HOH HOH . E 5 HOH A 108 577 577 HOH HOH . E 5 HOH A 109 578 578 HOH HOH . E 5 HOH A 110 579 579 HOH HOH . E 5 HOH A 111 580 580 HOH HOH . E 5 HOH A 112 581 581 HOH HOH . E 5 HOH A 113 582 582 HOH HOH . E 5 HOH A 114 583 583 HOH HOH . E 5 HOH A 115 584 584 HOH HOH . E 5 HOH A 116 585 585 HOH HOH . E 5 HOH A 117 586 586 HOH HOH . E 5 HOH A 118 587 587 HOH HOH . E 5 HOH A 119 588 588 HOH HOH . E 5 HOH A 120 589 589 HOH HOH . E 5 HOH A 121 590 590 HOH HOH . E 5 HOH A 122 591 591 HOH HOH . E 5 HOH A 123 592 592 HOH HOH . E 5 HOH A 124 593 593 HOH HOH . E 5 HOH A 125 594 594 HOH HOH . E 5 HOH A 126 595 595 HOH HOH . E 5 HOH A 127 596 596 HOH HOH . E 5 HOH A 128 597 597 HOH HOH . E 5 HOH A 129 598 598 HOH HOH . E 5 HOH A 130 599 599 HOH HOH . E 5 HOH A 131 600 600 HOH HOH . E 5 HOH A 132 601 601 HOH HOH . E 5 HOH A 133 602 602 HOH HOH . E 5 HOH A 134 603 603 HOH HOH . E 5 HOH A 135 604 604 HOH HOH . E 5 HOH A 136 605 605 HOH HOH . E 5 HOH A 137 606 606 HOH HOH . E 5 HOH A 138 607 607 HOH HOH . E 5 HOH A 139 608 608 HOH HOH . E 5 HOH A 140 609 609 HOH HOH . E 5 HOH A 141 610 610 HOH HOH . E 5 HOH A 142 611 611 HOH HOH . E 5 HOH A 143 612 612 HOH HOH . E 5 HOH A 144 613 613 HOH HOH . E 5 HOH A 145 614 614 HOH HOH . E 5 HOH A 146 616 616 HOH HOH . E 5 HOH A 147 617 617 HOH HOH . E 5 HOH A 148 618 618 HOH HOH . E 5 HOH A 149 620 620 HOH HOH . E 5 HOH A 150 621 621 HOH HOH . E 5 HOH A 151 622 622 HOH HOH . E 5 HOH A 152 623 623 HOH HOH . E 5 HOH A 153 624 624 HOH HOH . E 5 HOH A 154 625 625 HOH HOH . E 5 HOH A 155 626 626 HOH HOH . E 5 HOH A 156 627 627 HOH HOH . E 5 HOH A 157 631 631 HOH HOH . F 5 HOH B 1 628 628 HOH HOH . F 5 HOH B 2 629 629 HOH HOH . F 5 HOH B 3 630 630 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 TBY . A . C 3 -1.639 -16.99 33.148 0.7 25.04 ? C11 TBY 1 A 1 HETATM 2 C C11 TBY . B . C 3 -0.693 -18.055 29.604 0.3 13.42 ? C11 TBY 1 A 1 HETATM 3 C C10 TBY . A . C 3 -0.78 -16.205 32.162 0.7 24.33 ? C10 TBY 1 A 1 HETATM 4 C C10 TBY . B . C 3 -1.406 -16.988 30.433 0.3 16.75 ? C10 TBY 1 A 1 HETATM 5 SN SN1 TBY . A . C 3 -0.396 -17.349 30.398 0.7 22.32 ? SN1 TBY 1 A 1 HETATM 6 SN SN1 TBY . B . C 3 -0.288 -16.614 32.201 0.3 18.99 ? SN1 TBY 1 A 1 HETATM 7 C C2 TBY . A . C 3 1.306 -18.595 30.766 0.7 22.39 ? C2 TBY 1 A 1 HETATM 8 C C2 TBY . B . C 3 -1.418 -15.768 33.798 0.3 17.19 ? C2 TBY 1 A 1 HETATM 9 C C3 TBY . A . C 3 1.482 -18.773 32.267 0.7 23.53 ? C3 TBY 1 A 1 HETATM 10 C C3 TBY . B . C 3 -1.138 -16.507 35.102 0.3 18.66 ? C3 TBY 1 A 1 HETATM 11 C C4 TBY . A . C 3 0.491 -19.829 32.75 0.7 24.16 ? C4 TBY 1 A 1 HETATM 12 C C4 TBY . B . C 3 -2.103 -17.675 35.174 0.3 18.49 ? C4 TBY 1 A 1 HETATM 13 C C5 TBY . A . C 3 0.609 -20.013 34.243 0.7 26.24 ? C5 TBY 1 A 1 HETATM 14 C C5 TBY . B . C 3 -2.84 -17.74 33.858 0.3 17.62 ? C5 TBY 1 A 1 HETATM 15 C C6 TBY . A . C 3 -2.442 -17.929 30.081 0.7 24.91 ? C6 TBY 1 A 1 HETATM 16 C C6 TBY . B . C 3 1.24 -18.106 32.202 0.3 18.12 ? C6 TBY 1 A 1 HETATM 17 C C7 TBY . A . C 3 -2.734 -18.114 28.6 0.7 23.4 ? C7 TBY 1 A 1 HETATM 18 C C7 TBY . B . C 3 0.683 -19.33 32.912 0.3 18.72 ? C7 TBY 1 A 1 HETATM 19 C C8 TBY . A . C 3 -3.888 -17.239 28.137 0.7 22.98 ? C8 TBY 1 A 1 HETATM 20 C C8 TBY . B . C 3 0.111 -20.307 31.896 0.3 18.22 ? C8 TBY 1 A 1 HETATM 21 C C9 TBY . A . C 3 -3.432 -16.435 26.948 0.7 23.28 ? C9 TBY 1 A 1 HETATM 22 C C9 TBY . B . C 3 -0.03 -21.681 32.512 0.3 18.83 ? C9 TBY 1 A 1 HETATM 23 C C12 TBY . A . C 3 -2.11 -16.109 34.286 0.7 25.22 ? C12 TBY 1 A 1 HETATM 24 C C12 TBY . B . C 3 -1.752 -18.881 28.885 0.3 15.15 ? C12 TBY 1 A 1 HETATM 25 C C13 TBY . A . C 3 -3.091 -16.848 35.164 0.7 24.88 ? C13 TBY 1 A 1 HETATM 26 C C13 TBY . B . C 3 -2.409 -18.061 27.791 0.3 14.39 ? C13 TBY 1 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 26 #