data_3EAG
#
_model_server_result.job_id            wBH65LaWF3CHOvctKC8CTQ 
_model_server_result.datetime_utc      '2024-11-05 00:17:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3eag 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":401}' 
#
_entry.id    3EAG 
#
_exptl.entry_id    3EAG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3EAG 
_cell.length_a            65.497 
_cell.length_b            83.8 
_cell.length_c            143.838 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3EAG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ALA 3 A ALA 0 1_555 A N MSE 4 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
covale ? covale2 A C MSE 4 A MSE 1 1_555 A N LYS 5 A LYS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
covale ? covale3 A C PHE 16 A PHE 13 1_555 A N MSE 17 A MSE 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? 
covale ? covale4 A C MSE 17 A MSE 14 1_555 A N GLY 18 A GLY 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? 
covale ? covale5 A C LYS 37 A LYS 34 1_555 A N MSE 38 A MSE 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale6 A C MSE 38 A MSE 35 1_555 A N TYR 39 A TYR 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale7 A C PRO 41 A PRO 38 1_555 A N MSE 42 A MSE 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale8 A C MSE 42 A MSE 39 1_555 A N SER 43 A SER 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale9 A C GLY 79 A GLY 76 1_555 A N MSE 80 A MSE 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? 
covale ? covale10 A C MSE 80 A MSE 77 1_555 A N ASP 81 A ASP 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale11 A C SER 124 A SER 121 1_555 A N MSE 125 A MSE 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
covale ? covale12 A C MSE 125 A MSE 122 1_555 A N LEU 126 A LEU 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale13 A C LEU 288 A LEU 285 1_555 A N MSE 289 A MSE 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale14 A C MSE 289 A MSE 286 1_555 A N GLY 290 A GLY 287 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale15 A C ARG 294 A ARG 291 1_555 A N MSE 295 A MSE 292 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? 
covale ? covale16 A C MSE 295 A MSE 292 1_555 A N ASN 296 A ASN 293 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? 
covale ? covale17 B C ALA 3 B ALA 0 1_555 B N MSE 4 B MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? 
covale ? covale18 B C MSE 4 B MSE 1 1_555 B N LYS 5 B LYS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale19 B C PHE 16 B PHE 13 1_555 B N MSE 17 B MSE 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale20 B C MSE 17 B MSE 14 1_555 B N GLY 18 B GLY 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale21 B C LYS 37 B LYS 34 1_555 B N MSE 38 B MSE 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale22 B C MSE 38 B MSE 35 1_555 B N TYR 39 B TYR 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale23 B C PRO 41 B PRO 38 1_555 B N MSE 42 B MSE 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale24 B C MSE 42 B MSE 39 1_555 B N SER 43 B SER 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale25 B C GLY 79 B GLY 76 1_555 B N MSE 80 B MSE 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale26 B C MSE 80 B MSE 77 1_555 B N ASP 81 B ASP 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale27 B C SER 124 B SER 121 1_555 B N MSE 125 B MSE 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale28 B C MSE 125 B MSE 122 1_555 B N LEU 126 B LEU 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale29 B C LEU 288 B LEU 285 1_555 B N MSE 289 B MSE 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale30 B C MSE 289 B MSE 286 1_555 B N GLY 290 B GLY 287 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale31 B C ARG 294 B ARG 291 1_555 B N MSE 295 B MSE 292 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale32 B C MSE 295 B MSE 292 1_555 B N ASN 296 B ASN 293 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     3EAG 
_atom_sites.fract_transf_matrix[1][1]    0.015268 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011933 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006952 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 GOL A 1 401 401 GOL GOL . 
D 2 GOL B 1 401 401 GOL GOL . 
E 3 HOH A 1 402 1 HOH HOH . 
E 3 HOH A 2 403 2 HOH HOH . 
E 3 HOH A 3 404 3 HOH HOH . 
E 3 HOH A 4 405 5 HOH HOH . 
E 3 HOH A 5 406 6 HOH HOH . 
E 3 HOH A 6 407 8 HOH HOH . 
E 3 HOH A 7 408 10 HOH HOH . 
E 3 HOH A 8 409 15 HOH HOH . 
E 3 HOH A 9 410 17 HOH HOH . 
E 3 HOH A 10 411 18 HOH HOH . 
E 3 HOH A 11 412 19 HOH HOH . 
E 3 HOH A 12 413 20 HOH HOH . 
E 3 HOH A 13 414 23 HOH HOH . 
E 3 HOH A 14 415 24 HOH HOH . 
E 3 HOH A 15 416 26 HOH HOH . 
E 3 HOH A 16 417 34 HOH HOH . 
E 3 HOH A 17 418 35 HOH HOH . 
E 3 HOH A 18 419 40 HOH HOH . 
E 3 HOH A 19 420 43 HOH HOH . 
E 3 HOH A 20 421 44 HOH HOH . 
E 3 HOH A 21 422 46 HOH HOH . 
E 3 HOH A 22 423 47 HOH HOH . 
E 3 HOH A 23 424 50 HOH HOH . 
E 3 HOH A 24 425 54 HOH HOH . 
E 3 HOH A 25 426 56 HOH HOH . 
E 3 HOH A 26 427 57 HOH HOH . 
E 3 HOH A 27 428 59 HOH HOH . 
E 3 HOH A 28 429 69 HOH HOH . 
E 3 HOH A 29 430 71 HOH HOH . 
E 3 HOH A 30 431 74 HOH HOH . 
E 3 HOH A 31 432 76 HOH HOH . 
E 3 HOH A 32 433 77 HOH HOH . 
E 3 HOH A 33 434 79 HOH HOH . 
E 3 HOH A 34 435 81 HOH HOH . 
E 3 HOH A 35 436 82 HOH HOH . 
E 3 HOH A 36 437 83 HOH HOH . 
E 3 HOH A 37 438 84 HOH HOH . 
E 3 HOH A 38 439 85 HOH HOH . 
E 3 HOH A 39 440 87 HOH HOH . 
E 3 HOH A 40 441 88 HOH HOH . 
E 3 HOH A 41 442 89 HOH HOH . 
E 3 HOH A 42 443 90 HOH HOH . 
E 3 HOH A 43 444 91 HOH HOH . 
E 3 HOH A 44 445 92 HOH HOH . 
E 3 HOH A 45 446 93 HOH HOH . 
F 3 HOH B 1 402 4 HOH HOH . 
F 3 HOH B 2 403 7 HOH HOH . 
F 3 HOH B 3 404 9 HOH HOH . 
F 3 HOH B 4 405 11 HOH HOH . 
F 3 HOH B 5 406 12 HOH HOH . 
F 3 HOH B 6 407 14 HOH HOH . 
F 3 HOH B 7 408 16 HOH HOH . 
F 3 HOH B 8 409 21 HOH HOH . 
F 3 HOH B 9 410 22 HOH HOH . 
F 3 HOH B 10 411 25 HOH HOH . 
F 3 HOH B 11 412 27 HOH HOH . 
F 3 HOH B 12 413 28 HOH HOH . 
F 3 HOH B 13 414 29 HOH HOH . 
F 3 HOH B 14 415 30 HOH HOH . 
F 3 HOH B 15 416 31 HOH HOH . 
F 3 HOH B 16 417 32 HOH HOH . 
F 3 HOH B 17 418 33 HOH HOH . 
F 3 HOH B 18 419 36 HOH HOH . 
F 3 HOH B 19 420 37 HOH HOH . 
F 3 HOH B 20 421 38 HOH HOH . 
F 3 HOH B 21 422 41 HOH HOH . 
F 3 HOH B 22 423 42 HOH HOH . 
F 3 HOH B 23 424 45 HOH HOH . 
F 3 HOH B 24 425 48 HOH HOH . 
F 3 HOH B 25 426 49 HOH HOH . 
F 3 HOH B 26 427 51 HOH HOH . 
F 3 HOH B 27 428 52 HOH HOH . 
F 3 HOH B 28 429 60 HOH HOH . 
F 3 HOH B 29 430 62 HOH HOH . 
F 3 HOH B 30 431 63 HOH HOH . 
F 3 HOH B 31 432 64 HOH HOH . 
F 3 HOH B 32 433 65 HOH HOH . 
F 3 HOH B 33 434 66 HOH HOH . 
F 3 HOH B 34 435 67 HOH HOH . 
F 3 HOH B 35 436 68 HOH HOH . 
F 3 HOH B 36 437 70 HOH HOH . 
F 3 HOH B 37 438 72 HOH HOH . 
F 3 HOH B 38 439 73 HOH HOH . 
F 3 HOH B 39 440 75 HOH HOH . 
F 3 HOH B 40 441 78 HOH HOH . 
F 3 HOH B 41 442 80 HOH HOH . 
F 3 HOH B 42 443 94 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 2 3.894 64.272 46.954 1 73.11 ? C1 GOL 401 A 1 
HETATM 2 O O1 GOL . . . C 2 3.642 63.985 45.591 1 70.04 ? O1 GOL 401 A 1 
HETATM 3 C C2 GOL . . . C 2 4.676 63.142 47.628 1 73.63 ? C2 GOL 401 A 1 
HETATM 4 O O2 GOL . . . C 2 5.903 63.03 46.948 1 74.98 ? O2 GOL 401 A 1 
HETATM 5 C C3 GOL . . . C 2 3.928 61.833 47.384 1 74.68 ? C3 GOL 401 A 1 
HETATM 6 O O3 GOL . . . C 2 3.818 61.114 48.593 1 74.07 ? O3 GOL 401 A 1 
#
_model_server_stats.io_time_ms              68 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
#