data_3EAT # _model_server_result.job_id y5aabbk0rSbfHplQc-CP3g _model_server_result.datetime_utc '2024-12-06 06:54:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3eat # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":304}' # _entry.id 3EAT # _exptl.entry_id 3EAT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3EAT _cell.length_a 125.35 _cell.length_b 125.35 _cell.length_c 107.11 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3EAT _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 62.675 108.556284 0 3 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -62.675 108.556284 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id NA _struct_conn.ptnr1_label_comp_id NA _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id X _struct_conn.ptnr1_auth_comp_id NA _struct_conn.ptnr1_auth_seq_id 304 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id O _struct_conn.ptnr2_label_comp_id HOH _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id X _struct_conn.ptnr2_auth_comp_id HOH _struct_conn.ptnr2_auth_seq_id 422 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.881 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3EAT _atom_sites.fract_transf_matrix[1][1] 0.007978 _atom_sites.fract_transf_matrix[1][2] 0.004606 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009212 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009336 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA X 1 304 304 NA NA . C 3 HOH X 1 305 1 HOH HOH . C 3 HOH X 2 306 2 HOH HOH . C 3 HOH X 3 307 3 HOH HOH . C 3 HOH X 4 308 4 HOH HOH . C 3 HOH X 5 309 5 HOH HOH . C 3 HOH X 6 310 6 HOH HOH . C 3 HOH X 7 311 7 HOH HOH . C 3 HOH X 8 312 8 HOH HOH . C 3 HOH X 9 313 9 HOH HOH . C 3 HOH X 10 314 10 HOH HOH . C 3 HOH X 11 315 11 HOH HOH . C 3 HOH X 12 316 12 HOH HOH . C 3 HOH X 13 317 13 HOH HOH . C 3 HOH X 14 318 14 HOH HOH . C 3 HOH X 15 319 15 HOH HOH . C 3 HOH X 16 320 16 HOH HOH . C 3 HOH X 17 321 17 HOH HOH . C 3 HOH X 18 322 18 HOH HOH . C 3 HOH X 19 323 19 HOH HOH . C 3 HOH X 20 324 20 HOH HOH . C 3 HOH X 21 325 21 HOH HOH . C 3 HOH X 22 326 22 HOH HOH . C 3 HOH X 23 327 23 HOH HOH . C 3 HOH X 24 328 24 HOH HOH . C 3 HOH X 25 329 25 HOH HOH . C 3 HOH X 26 330 26 HOH HOH . C 3 HOH X 27 331 27 HOH HOH . C 3 HOH X 28 332 28 HOH HOH . C 3 HOH X 29 333 29 HOH HOH . C 3 HOH X 30 334 30 HOH HOH . C 3 HOH X 31 335 31 HOH HOH . C 3 HOH X 32 336 32 HOH HOH . C 3 HOH X 33 337 33 HOH HOH . C 3 HOH X 34 338 34 HOH HOH . C 3 HOH X 35 339 35 HOH HOH . C 3 HOH X 36 340 36 HOH HOH . C 3 HOH X 37 341 37 HOH HOH . C 3 HOH X 38 342 38 HOH HOH . C 3 HOH X 39 343 39 HOH HOH . C 3 HOH X 40 344 40 HOH HOH . C 3 HOH X 41 345 41 HOH HOH . C 3 HOH X 42 346 42 HOH HOH . C 3 HOH X 43 347 43 HOH HOH . C 3 HOH X 44 348 44 HOH HOH . C 3 HOH X 45 349 45 HOH HOH . C 3 HOH X 46 350 46 HOH HOH . C 3 HOH X 47 351 47 HOH HOH . C 3 HOH X 48 352 48 HOH HOH . C 3 HOH X 49 353 49 HOH HOH . C 3 HOH X 50 354 50 HOH HOH . C 3 HOH X 51 355 51 HOH HOH . C 3 HOH X 52 356 52 HOH HOH . C 3 HOH X 53 357 53 HOH HOH . C 3 HOH X 54 358 54 HOH HOH . C 3 HOH X 55 359 55 HOH HOH . C 3 HOH X 56 360 56 HOH HOH . C 3 HOH X 57 361 57 HOH HOH . C 3 HOH X 58 362 58 HOH HOH . C 3 HOH X 59 363 59 HOH HOH . C 3 HOH X 60 364 60 HOH HOH . C 3 HOH X 61 365 61 HOH HOH . C 3 HOH X 62 366 62 HOH HOH . C 3 HOH X 63 367 63 HOH HOH . C 3 HOH X 64 368 64 HOH HOH . C 3 HOH X 65 369 65 HOH HOH . C 3 HOH X 66 370 66 HOH HOH . C 3 HOH X 67 371 67 HOH HOH . C 3 HOH X 68 372 68 HOH HOH . C 3 HOH X 69 373 69 HOH HOH . C 3 HOH X 70 374 70 HOH HOH . C 3 HOH X 71 375 71 HOH HOH . C 3 HOH X 72 376 72 HOH HOH . C 3 HOH X 73 377 73 HOH HOH . C 3 HOH X 74 378 74 HOH HOH . C 3 HOH X 75 379 75 HOH HOH . C 3 HOH X 76 380 76 HOH HOH . C 3 HOH X 77 381 77 HOH HOH . C 3 HOH X 78 382 78 HOH HOH . C 3 HOH X 79 383 79 HOH HOH . C 3 HOH X 80 384 80 HOH HOH . C 3 HOH X 81 385 81 HOH HOH . C 3 HOH X 82 386 82 HOH HOH . C 3 HOH X 83 387 83 HOH HOH . C 3 HOH X 84 388 84 HOH HOH . C 3 HOH X 85 389 85 HOH HOH . C 3 HOH X 86 390 86 HOH HOH . C 3 HOH X 87 391 87 HOH HOH . C 3 HOH X 88 392 88 HOH HOH . C 3 HOH X 89 393 89 HOH HOH . C 3 HOH X 90 394 90 HOH HOH . C 3 HOH X 91 395 91 HOH HOH . C 3 HOH X 92 396 92 HOH HOH . C 3 HOH X 93 397 93 HOH HOH . C 3 HOH X 94 398 94 HOH HOH . C 3 HOH X 95 399 95 HOH HOH . C 3 HOH X 96 400 96 HOH HOH . C 3 HOH X 97 401 97 HOH HOH . C 3 HOH X 98 402 98 HOH HOH . C 3 HOH X 99 403 99 HOH HOH . C 3 HOH X 100 404 100 HOH HOH . C 3 HOH X 101 405 101 HOH HOH . C 3 HOH X 102 406 102 HOH HOH . C 3 HOH X 103 407 103 HOH HOH . C 3 HOH X 104 408 104 HOH HOH . C 3 HOH X 105 409 105 HOH HOH . C 3 HOH X 106 410 106 HOH HOH . C 3 HOH X 107 411 107 HOH HOH . C 3 HOH X 108 412 108 HOH HOH . C 3 HOH X 109 413 109 HOH HOH . C 3 HOH X 110 414 110 HOH HOH . C 3 HOH X 111 415 111 HOH HOH . C 3 HOH X 112 416 112 HOH HOH . C 3 HOH X 113 417 113 HOH HOH . C 3 HOH X 114 418 114 HOH HOH . C 3 HOH X 115 419 115 HOH HOH . C 3 HOH X 116 420 116 HOH HOH . C 3 HOH X 117 421 117 HOH HOH . C 3 HOH X 118 422 301 HOH HOH . C 3 HOH X 119 423 302 HOH HOH . C 3 HOH X 120 424 303 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 0.004 _atom_site.Cartn_y 72.371 _atom_site.Cartn_z 42.205 _atom_site.occupancy 0.33 _atom_site.B_iso_or_equiv 13.41 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 304 _atom_site.auth_asym_id X _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #