data_3EBA # _model_server_result.job_id LjaNGWb-gS4pRdzn0i-oqw _model_server_result.datetime_utc '2024-11-09 02:22:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3eba # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":129}' # _entry.id 3EBA # _exptl.entry_id 3EBA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3EBA _cell.length_a 63.67 _cell.length_b 63.67 _cell.length_c 119.509 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3EBA _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 22 1_555 A SG CYS 93 A CYS 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf2 B SG CYS 6 B CYS 6 1_555 B SG CYS 128 B CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 B SG CYS 30 B CYS 30 1_555 B SG CYS 116 B CYS 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 B SG CYS 65 B CYS 65 1_555 B SG CYS 81 B CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 B SG CYS 77 B CYS 77 1_555 B SG CYS 95 B CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 3EBA _atom_sites.fract_transf_matrix[1][1] 0.015706 _atom_sites.fract_transf_matrix[1][2] 0.009068 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018136 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008368 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 128 1 SO4 SO4 . D 3 SO4 A 1 129 2 SO4 SO4 . E 3 SO4 A 1 130 3 SO4 SO4 . F 3 SO4 A 1 131 4 SO4 SO4 . G 3 SO4 A 1 132 6 SO4 SO4 . H 3 SO4 B 1 131 5 SO4 SO4 . I 4 HOH A 1 133 7 HOH HOH . I 4 HOH A 2 134 8 HOH HOH . I 4 HOH A 3 135 9 HOH HOH . I 4 HOH A 4 136 10 HOH HOH . I 4 HOH A 5 137 11 HOH HOH . I 4 HOH A 6 138 12 HOH HOH . I 4 HOH A 7 139 14 HOH HOH . I 4 HOH A 8 140 15 HOH HOH . I 4 HOH A 9 141 16 HOH HOH . I 4 HOH A 10 142 17 HOH HOH . I 4 HOH A 11 143 18 HOH HOH . I 4 HOH A 12 144 19 HOH HOH . I 4 HOH A 13 145 20 HOH HOH . I 4 HOH A 14 146 21 HOH HOH . I 4 HOH A 15 147 22 HOH HOH . I 4 HOH A 16 148 26 HOH HOH . I 4 HOH A 17 149 27 HOH HOH . I 4 HOH A 18 150 28 HOH HOH . I 4 HOH A 19 151 29 HOH HOH . I 4 HOH A 20 152 30 HOH HOH . I 4 HOH A 21 153 31 HOH HOH . I 4 HOH A 22 154 34 HOH HOH . I 4 HOH A 23 155 35 HOH HOH . I 4 HOH A 24 156 37 HOH HOH . I 4 HOH A 25 157 38 HOH HOH . I 4 HOH A 26 158 40 HOH HOH . I 4 HOH A 27 159 41 HOH HOH . I 4 HOH A 28 160 42 HOH HOH . I 4 HOH A 29 161 43 HOH HOH . I 4 HOH A 30 162 44 HOH HOH . I 4 HOH A 31 163 47 HOH HOH . I 4 HOH A 32 164 48 HOH HOH . I 4 HOH A 33 165 49 HOH HOH . I 4 HOH A 34 166 50 HOH HOH . I 4 HOH A 35 167 51 HOH HOH . I 4 HOH A 36 168 52 HOH HOH . I 4 HOH A 37 169 53 HOH HOH . I 4 HOH A 38 170 54 HOH HOH . I 4 HOH A 39 171 55 HOH HOH . I 4 HOH A 40 172 56 HOH HOH . I 4 HOH A 41 173 57 HOH HOH . I 4 HOH A 42 174 58 HOH HOH . I 4 HOH A 43 175 60 HOH HOH . I 4 HOH A 44 176 61 HOH HOH . I 4 HOH A 45 177 62 HOH HOH . I 4 HOH A 46 178 64 HOH HOH . I 4 HOH A 47 179 65 HOH HOH . I 4 HOH A 48 180 66 HOH HOH . I 4 HOH A 49 181 67 HOH HOH . I 4 HOH A 50 182 68 HOH HOH . I 4 HOH A 51 183 69 HOH HOH . I 4 HOH A 52 184 70 HOH HOH . I 4 HOH A 53 185 72 HOH HOH . I 4 HOH A 54 186 75 HOH HOH . I 4 HOH A 55 187 76 HOH HOH . I 4 HOH A 56 188 77 HOH HOH . I 4 HOH A 57 189 78 HOH HOH . I 4 HOH A 58 190 80 HOH HOH . I 4 HOH A 59 191 85 HOH HOH . I 4 HOH A 60 192 87 HOH HOH . I 4 HOH A 61 193 88 HOH HOH . I 4 HOH A 62 194 90 HOH HOH . I 4 HOH A 63 195 91 HOH HOH . I 4 HOH A 64 196 92 HOH HOH . I 4 HOH A 65 197 95 HOH HOH . I 4 HOH A 66 198 97 HOH HOH . I 4 HOH A 67 199 98 HOH HOH . I 4 HOH A 68 200 99 HOH HOH . I 4 HOH A 69 201 101 HOH HOH . I 4 HOH A 70 202 103 HOH HOH . I 4 HOH A 71 203 105 HOH HOH . I 4 HOH A 72 204 107 HOH HOH . I 4 HOH A 73 205 108 HOH HOH . I 4 HOH A 74 206 109 HOH HOH . I 4 HOH A 75 207 110 HOH HOH . I 4 HOH A 76 208 112 HOH HOH . I 4 HOH A 77 209 114 HOH HOH . I 4 HOH A 78 210 115 HOH HOH . I 4 HOH A 79 211 118 HOH HOH . I 4 HOH A 80 212 119 HOH HOH . I 4 HOH A 81 213 120 HOH HOH . I 4 HOH A 82 214 121 HOH HOH . I 4 HOH A 83 215 124 HOH HOH . I 4 HOH A 84 216 125 HOH HOH . I 4 HOH A 85 217 126 HOH HOH . I 4 HOH A 86 218 127 HOH HOH . I 4 HOH A 87 219 129 HOH HOH . I 4 HOH A 88 220 131 HOH HOH . I 4 HOH A 89 221 132 HOH HOH . I 4 HOH A 90 222 137 HOH HOH . I 4 HOH A 91 223 139 HOH HOH . I 4 HOH A 92 224 140 HOH HOH . I 4 HOH A 93 225 143 HOH HOH . I 4 HOH A 94 226 144 HOH HOH . I 4 HOH A 95 227 146 HOH HOH . I 4 HOH A 96 228 148 HOH HOH . I 4 HOH A 97 229 149 HOH HOH . I 4 HOH A 98 230 152 HOH HOH . I 4 HOH A 99 231 153 HOH HOH . I 4 HOH A 100 232 154 HOH HOH . I 4 HOH A 101 233 155 HOH HOH . I 4 HOH A 102 234 156 HOH HOH . I 4 HOH A 103 235 160 HOH HOH . I 4 HOH A 104 236 165 HOH HOH . I 4 HOH A 105 237 166 HOH HOH . I 4 HOH A 106 238 167 HOH HOH . I 4 HOH A 107 239 168 HOH HOH . I 4 HOH A 108 240 170 HOH HOH . I 4 HOH A 109 241 172 HOH HOH . I 4 HOH A 110 242 177 HOH HOH . I 4 HOH A 111 243 180 HOH HOH . I 4 HOH A 112 244 182 HOH HOH . I 4 HOH A 113 245 183 HOH HOH . I 4 HOH A 114 246 184 HOH HOH . I 4 HOH A 115 247 191 HOH HOH . I 4 HOH A 116 248 192 HOH HOH . I 4 HOH A 117 249 194 HOH HOH . I 4 HOH A 118 250 204 HOH HOH . I 4 HOH A 119 251 205 HOH HOH . I 4 HOH A 120 252 207 HOH HOH . I 4 HOH A 121 253 209 HOH HOH . I 4 HOH A 122 254 210 HOH HOH . I 4 HOH A 123 255 211 HOH HOH . I 4 HOH A 124 256 212 HOH HOH . I 4 HOH A 125 257 213 HOH HOH . I 4 HOH A 126 258 214 HOH HOH . I 4 HOH A 127 259 215 HOH HOH . I 4 HOH A 128 260 216 HOH HOH . I 4 HOH A 129 261 217 HOH HOH . I 4 HOH A 130 262 218 HOH HOH . I 4 HOH A 131 263 219 HOH HOH . I 4 HOH A 132 264 220 HOH HOH . I 4 HOH A 133 265 222 HOH HOH . I 4 HOH A 134 266 223 HOH HOH . I 4 HOH A 135 267 224 HOH HOH . I 4 HOH A 136 268 225 HOH HOH . I 4 HOH A 137 269 81 HOH HOH . I 4 HOH A 138 270 128 HOH HOH . I 4 HOH A 139 271 162 HOH HOH . I 4 HOH A 140 272 186 HOH HOH . I 4 HOH A 141 273 193 HOH HOH . J 4 HOH B 1 132 13 HOH HOH . J 4 HOH B 2 133 23 HOH HOH . J 4 HOH B 3 134 24 HOH HOH . J 4 HOH B 4 135 25 HOH HOH . J 4 HOH B 5 136 32 HOH HOH . J 4 HOH B 6 137 33 HOH HOH . J 4 HOH B 7 138 36 HOH HOH . J 4 HOH B 8 139 39 HOH HOH . J 4 HOH B 9 140 45 HOH HOH . J 4 HOH B 10 141 46 HOH HOH . J 4 HOH B 11 142 59 HOH HOH . J 4 HOH B 12 143 63 HOH HOH . J 4 HOH B 13 144 71 HOH HOH . J 4 HOH B 14 145 73 HOH HOH . J 4 HOH B 15 146 74 HOH HOH . J 4 HOH B 16 147 79 HOH HOH . J 4 HOH B 17 149 82 HOH HOH . J 4 HOH B 18 150 83 HOH HOH . J 4 HOH B 19 151 84 HOH HOH . J 4 HOH B 20 152 86 HOH HOH . J 4 HOH B 21 153 89 HOH HOH . J 4 HOH B 22 154 93 HOH HOH . J 4 HOH B 23 155 94 HOH HOH . J 4 HOH B 24 156 96 HOH HOH . J 4 HOH B 25 157 100 HOH HOH . J 4 HOH B 26 158 102 HOH HOH . J 4 HOH B 27 159 104 HOH HOH . J 4 HOH B 28 160 106 HOH HOH . J 4 HOH B 29 161 111 HOH HOH . J 4 HOH B 30 162 113 HOH HOH . J 4 HOH B 31 163 116 HOH HOH . J 4 HOH B 32 164 117 HOH HOH . J 4 HOH B 33 165 122 HOH HOH . J 4 HOH B 34 166 123 HOH HOH . J 4 HOH B 35 168 130 HOH HOH . J 4 HOH B 36 169 133 HOH HOH . J 4 HOH B 37 170 134 HOH HOH . J 4 HOH B 38 171 135 HOH HOH . J 4 HOH B 39 172 136 HOH HOH . J 4 HOH B 40 173 138 HOH HOH . J 4 HOH B 41 174 141 HOH HOH . J 4 HOH B 42 175 142 HOH HOH . J 4 HOH B 43 176 145 HOH HOH . J 4 HOH B 44 177 147 HOH HOH . J 4 HOH B 45 178 150 HOH HOH . J 4 HOH B 46 179 151 HOH HOH . J 4 HOH B 47 180 157 HOH HOH . J 4 HOH B 48 181 158 HOH HOH . J 4 HOH B 49 182 159 HOH HOH . J 4 HOH B 50 183 161 HOH HOH . J 4 HOH B 51 185 163 HOH HOH . J 4 HOH B 52 186 164 HOH HOH . J 4 HOH B 53 187 169 HOH HOH . J 4 HOH B 54 188 171 HOH HOH . J 4 HOH B 55 189 173 HOH HOH . J 4 HOH B 56 190 174 HOH HOH . J 4 HOH B 57 191 175 HOH HOH . J 4 HOH B 58 192 176 HOH HOH . J 4 HOH B 59 193 178 HOH HOH . J 4 HOH B 60 194 179 HOH HOH . J 4 HOH B 61 195 185 HOH HOH . J 4 HOH B 62 197 187 HOH HOH . J 4 HOH B 63 198 188 HOH HOH . J 4 HOH B 64 199 189 HOH HOH . J 4 HOH B 65 200 190 HOH HOH . J 4 HOH B 66 202 195 HOH HOH . J 4 HOH B 67 203 196 HOH HOH . J 4 HOH B 68 204 197 HOH HOH . J 4 HOH B 69 205 198 HOH HOH . J 4 HOH B 70 206 199 HOH HOH . J 4 HOH B 71 207 200 HOH HOH . J 4 HOH B 72 208 201 HOH HOH . J 4 HOH B 73 209 202 HOH HOH . J 4 HOH B 74 210 203 HOH HOH . J 4 HOH B 75 211 206 HOH HOH . J 4 HOH B 76 212 221 HOH HOH . J 4 HOH B 77 244 181 HOH HOH . J 4 HOH B 78 254 208 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 3 15.366 50.792 29.414 1 42.22 ? S SO4 129 A 1 HETATM 2 O O1 SO4 . . . D 3 16.161 52.035 29.517 1 31.72 ? O1 SO4 129 A 1 HETATM 3 O O2 SO4 . . . D 3 14.108 50.943 30.175 1 40.74 ? O2 SO4 129 A 1 HETATM 4 O O3 SO4 . . . D 3 16.142 49.665 29.968 1 38.13 ? O3 SO4 129 A 1 HETATM 5 O O4 SO4 . . . D 3 15.044 50.521 27.999 1 42.73 ? O4 SO4 129 A 1 # _model_server_stats.io_time_ms 320 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #