data_3ECC # _model_server_result.job_id 56L64uEeIgDQnqfZV4ucdQ _model_server_result.datetime_utc '2024-11-05 04:35:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ecc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1554}' # _entry.id 3ECC # _exptl.entry_id 3ECC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 66.007 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BERYLLIUM TRIFLUORIDE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3ECC _cell.length_a 84.582 _cell.length_b 84.582 _cell.length_c 49.587 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ECC _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'Be F3 -1' _chem_comp.formula_weight 66.007 _chem_comp.id BEF _chem_comp.mon_nstd_flag . _chem_comp.name 'BERYLLIUM TRIFLUORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag BE F1 BEF sing 114 n n BE F2 BEF sing 115 n n BE F3 BEF sing 116 n n # _atom_sites.entry_id 3ECC _atom_sites.fract_transf_matrix[1][1] 0.011823 _atom_sites.fract_transf_matrix[1][2] 0.006826 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013652 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020167 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP A 1 500 500 ADP ADP . C 3 MG A 1 300 300 MG MG . D 4 BEF A 1 1554 1554 BEF BEF . E 5 HOH A 1 1 1 HOH WAT . E 5 HOH A 2 2 2 HOH WAT . E 5 HOH A 3 3 3 HOH WAT . E 5 HOH A 4 4 4 HOH WAT . E 5 HOH A 5 5 5 HOH WAT . E 5 HOH A 6 6 6 HOH WAT . E 5 HOH A 7 7 7 HOH WAT . E 5 HOH A 8 8 8 HOH WAT . E 5 HOH A 9 9 9 HOH WAT . E 5 HOH A 10 10 10 HOH WAT . E 5 HOH A 11 11 11 HOH WAT . E 5 HOH A 12 12 12 HOH WAT . E 5 HOH A 13 13 13 HOH WAT . E 5 HOH A 14 14 14 HOH WAT . E 5 HOH A 15 15 15 HOH WAT . E 5 HOH A 16 16 16 HOH WAT . E 5 HOH A 17 17 17 HOH WAT . E 5 HOH A 18 18 18 HOH WAT . E 5 HOH A 19 19 19 HOH WAT . E 5 HOH A 20 20 20 HOH WAT . E 5 HOH A 21 21 21 HOH WAT . E 5 HOH A 22 22 22 HOH WAT . E 5 HOH A 23 23 23 HOH WAT . E 5 HOH A 24 24 24 HOH WAT . E 5 HOH A 25 25 25 HOH WAT . E 5 HOH A 26 26 26 HOH WAT . E 5 HOH A 27 27 27 HOH WAT . E 5 HOH A 28 28 28 HOH WAT . E 5 HOH A 29 29 29 HOH WAT . E 5 HOH A 30 30 30 HOH WAT . E 5 HOH A 31 31 31 HOH WAT . E 5 HOH A 32 32 32 HOH WAT . E 5 HOH A 33 33 33 HOH WAT . E 5 HOH A 34 34 34 HOH WAT . E 5 HOH A 35 35 35 HOH WAT . E 5 HOH A 36 36 36 HOH WAT . E 5 HOH A 37 37 37 HOH WAT . E 5 HOH A 38 38 38 HOH WAT . E 5 HOH A 39 39 39 HOH WAT . E 5 HOH A 40 40 40 HOH WAT . E 5 HOH A 41 41 41 HOH WAT . E 5 HOH A 42 227 42 HOH WAT . E 5 HOH A 43 228 43 HOH WAT . E 5 HOH A 44 229 44 HOH WAT . E 5 HOH A 45 230 45 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 BE BE BEF . . . D 4 23.558 14.26 23.552 1 51.11 ? BE BEF 1554 A 1 HETATM 2 F F1 BEF . . . D 4 23.016 15.546 22.478 1 51.68 ? F1 BEF 1554 A 1 HETATM 3 F F2 BEF . . . D 4 23.547 14.501 25.307 1 52.67 ? F2 BEF 1554 A 1 HETATM 4 F F3 BEF . . . D 4 24.52 12.967 22.838 1 50.29 ? F3 BEF 1554 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #