data_3ECM # _model_server_result.job_id K1XJXgpgKth8FLZSKNuJBA _model_server_result.datetime_utc '2025-04-01 20:16:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ecm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":2}' # _entry.id 3ECM # _exptl.entry_id 3ECM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3ECM _cell.length_a 76.261 _cell.length_b 132.661 _cell.length_c 101.517 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ECM _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 47 A CYS 528 1_555 A SG CYS 52 A CYS 533 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc1 B ZN ZN . A ZN 1 1_555 A NE2 HIS 79 A HIS 560 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? metalc ? metalc2 B ZN ZN . A ZN 1 1_555 A NE2 HIS 115 A HIS 596 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc3 B ZN ZN . A ZN 1 1_555 A OD2 ASP 116 A ASP 597 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc4 B ZN ZN . A ZN 1 1_555 A OD1 ASP 245 A ASP 726 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? metalc ? metalc5 B ZN ZN . A ZN 1 1_555 D O HOH . A HOH 820 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc6 C MG MG . A MG 2 1_555 A OD1 ASP 116 A ASP 597 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc7 C MG MG . A MG 2 1_555 D O HOH . A HOH 820 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc8 C MG MG . A MG 2 1_555 D O HOH . A HOH 822 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc9 C MG MG . A MG 2 1_555 D O HOH . A HOH 823 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc10 C MG MG . A MG 2 1_555 D O HOH . A HOH 824 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc11 C MG MG . A MG 2 1_555 D O HOH . A HOH 825 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3ECM _atom_sites.fract_transf_matrix[1][1] 0.013113 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007538 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009851 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 1 1 ZN ZN . C 3 MG A 1 2 2 MG MG . D 4 HOH A 1 820 1 HOH TIP . D 4 HOH A 2 821 2 HOH TIP . D 4 HOH A 3 822 3 HOH TIP . D 4 HOH A 4 823 4 HOH TIP . D 4 HOH A 5 824 5 HOH TIP . D 4 HOH A 6 825 6 HOH TIP . D 4 HOH A 7 826 7 HOH TIP . D 4 HOH A 8 827 8 HOH TIP . D 4 HOH A 9 828 9 HOH TIP . D 4 HOH A 10 829 10 HOH TIP . D 4 HOH A 11 830 11 HOH TIP . D 4 HOH A 12 831 12 HOH TIP . D 4 HOH A 13 832 13 HOH TIP . D 4 HOH A 14 833 14 HOH TIP . D 4 HOH A 15 834 15 HOH TIP . D 4 HOH A 16 835 16 HOH TIP . D 4 HOH A 17 836 17 HOH TIP . D 4 HOH A 18 837 18 HOH TIP . D 4 HOH A 19 838 19 HOH TIP . D 4 HOH A 20 839 20 HOH TIP . D 4 HOH A 21 840 21 HOH TIP . D 4 HOH A 22 841 22 HOH TIP . D 4 HOH A 23 842 23 HOH TIP . D 4 HOH A 24 843 24 HOH TIP . D 4 HOH A 25 844 25 HOH TIP . D 4 HOH A 26 845 26 HOH TIP . D 4 HOH A 27 846 27 HOH TIP . D 4 HOH A 28 847 28 HOH TIP . D 4 HOH A 29 848 29 HOH TIP . D 4 HOH A 30 849 30 HOH TIP . D 4 HOH A 31 850 31 HOH TIP . D 4 HOH A 32 851 32 HOH TIP . D 4 HOH A 33 852 33 HOH TIP . D 4 HOH A 34 853 34 HOH TIP . D 4 HOH A 35 854 35 HOH TIP . D 4 HOH A 36 855 36 HOH TIP . D 4 HOH A 37 856 37 HOH TIP . D 4 HOH A 38 857 38 HOH TIP . D 4 HOH A 39 858 39 HOH TIP . D 4 HOH A 40 859 40 HOH TIP . D 4 HOH A 41 860 41 HOH TIP . D 4 HOH A 42 861 42 HOH TIP . D 4 HOH A 43 862 43 HOH TIP . D 4 HOH A 44 863 44 HOH TIP . D 4 HOH A 45 864 45 HOH TIP . D 4 HOH A 46 865 46 HOH TIP . D 4 HOH A 47 866 47 HOH TIP . D 4 HOH A 48 867 48 HOH TIP . D 4 HOH A 49 868 49 HOH TIP . D 4 HOH A 50 869 50 HOH TIP . D 4 HOH A 51 870 51 HOH TIP . D 4 HOH A 52 871 52 HOH TIP . D 4 HOH A 53 872 53 HOH TIP . D 4 HOH A 54 873 54 HOH TIP . D 4 HOH A 55 874 55 HOH TIP . D 4 HOH A 56 875 56 HOH TIP . D 4 HOH A 57 876 57 HOH TIP . D 4 HOH A 58 877 58 HOH TIP . D 4 HOH A 59 878 59 HOH TIP . D 4 HOH A 60 879 60 HOH TIP . D 4 HOH A 61 880 61 HOH TIP . D 4 HOH A 62 881 62 HOH TIP . D 4 HOH A 63 882 63 HOH TIP . D 4 HOH A 64 883 64 HOH TIP . D 4 HOH A 65 884 65 HOH TIP . D 4 HOH A 66 885 66 HOH TIP . D 4 HOH A 67 886 67 HOH TIP . D 4 HOH A 68 887 68 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 5.655 _atom_site.Cartn_y 14.499 _atom_site.Cartn_z -3.547 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 36.2 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 2 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #