data_3EDW # _model_server_result.job_id 7QwImYPHoAuGnzASj9I36Q _model_server_result.datetime_utc '2024-11-22 12:15:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3edw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":315}' # _entry.id 3EDW # _exptl.entry_id 3EDW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3EDW _cell.length_a 96.022 _cell.length_b 96.022 _cell.length_c 80.723 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3EDW _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 x-y,-y,-z+2/3 1 0 0 0 -1 0 0 0 -1 0 0 53.815333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 199 _struct_conn.ptnr1_auth_asym_id X _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 199 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 210 _struct_conn.ptnr2_auth_asym_id X _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 210 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.443 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 3EDW _atom_sites.fract_transf_matrix[1][1] 0.010414 _atom_sites.fract_transf_matrix[1][2] 0.006013 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012025 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012388 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 X 1 315 315 SO4 SO4 . C 2 SO4 X 1 317 317 SO4 SO4 . D 2 SO4 X 1 318 318 SO4 SO4 . E 3 HOH X 1 319 2 HOH HOH . E 3 HOH X 2 320 3 HOH HOH . E 3 HOH X 3 321 4 HOH HOH . E 3 HOH X 4 322 5 HOH HOH . E 3 HOH X 5 323 6 HOH HOH . E 3 HOH X 6 324 7 HOH HOH . E 3 HOH X 7 325 9 HOH HOH . E 3 HOH X 8 326 10 HOH HOH . E 3 HOH X 9 327 12 HOH HOH . E 3 HOH X 10 328 13 HOH HOH . E 3 HOH X 11 329 14 HOH HOH . E 3 HOH X 12 330 15 HOH HOH . E 3 HOH X 13 331 16 HOH HOH . E 3 HOH X 14 332 17 HOH HOH . E 3 HOH X 15 333 18 HOH HOH . E 3 HOH X 16 334 19 HOH HOH . E 3 HOH X 17 335 20 HOH HOH . E 3 HOH X 18 336 21 HOH HOH . E 3 HOH X 19 337 22 HOH HOH . E 3 HOH X 20 338 23 HOH HOH . E 3 HOH X 21 339 24 HOH HOH . E 3 HOH X 22 340 26 HOH HOH . E 3 HOH X 23 341 27 HOH HOH . E 3 HOH X 24 342 29 HOH HOH . E 3 HOH X 25 343 30 HOH HOH . E 3 HOH X 26 344 32 HOH HOH . E 3 HOH X 27 345 33 HOH HOH . E 3 HOH X 28 346 34 HOH HOH . E 3 HOH X 29 347 35 HOH HOH . E 3 HOH X 30 348 36 HOH HOH . E 3 HOH X 31 349 38 HOH HOH . E 3 HOH X 32 350 39 HOH HOH . E 3 HOH X 33 351 40 HOH HOH . E 3 HOH X 34 352 43 HOH HOH . E 3 HOH X 35 353 44 HOH HOH . E 3 HOH X 36 354 45 HOH HOH . E 3 HOH X 37 355 50 HOH HOH . E 3 HOH X 38 356 55 HOH HOH . E 3 HOH X 39 357 57 HOH HOH . E 3 HOH X 40 358 59 HOH HOH . E 3 HOH X 41 359 62 HOH HOH . E 3 HOH X 42 360 64 HOH HOH . E 3 HOH X 43 361 67 HOH HOH . E 3 HOH X 44 362 68 HOH HOH . E 3 HOH X 45 363 69 HOH HOH . E 3 HOH X 46 364 70 HOH HOH . E 3 HOH X 47 365 72 HOH HOH . E 3 HOH X 48 366 73 HOH HOH . E 3 HOH X 49 367 77 HOH HOH . E 3 HOH X 50 368 78 HOH HOH . E 3 HOH X 51 369 79 HOH HOH . E 3 HOH X 52 370 81 HOH HOH . E 3 HOH X 53 371 82 HOH HOH . E 3 HOH X 54 372 83 HOH HOH . E 3 HOH X 55 373 84 HOH HOH . E 3 HOH X 56 374 86 HOH HOH . E 3 HOH X 57 375 87 HOH HOH . E 3 HOH X 58 376 89 HOH HOH . E 3 HOH X 59 377 94 HOH HOH . E 3 HOH X 60 378 96 HOH HOH . E 3 HOH X 61 379 100 HOH HOH . E 3 HOH X 62 380 103 HOH HOH . E 3 HOH X 63 381 107 HOH HOH . E 3 HOH X 64 382 108 HOH HOH . E 3 HOH X 65 383 109 HOH HOH . E 3 HOH X 66 384 111 HOH HOH . E 3 HOH X 67 385 114 HOH HOH . E 3 HOH X 68 386 115 HOH HOH . E 3 HOH X 69 387 116 HOH HOH . E 3 HOH X 70 388 119 HOH HOH . E 3 HOH X 71 389 120 HOH HOH . E 3 HOH X 72 390 122 HOH HOH . E 3 HOH X 73 391 124 HOH HOH . E 3 HOH X 74 392 129 HOH HOH . E 3 HOH X 75 393 132 HOH HOH . E 3 HOH X 76 394 139 HOH HOH . E 3 HOH X 77 395 141 HOH HOH . E 3 HOH X 78 396 142 HOH HOH . E 3 HOH X 79 397 144 HOH HOH . E 3 HOH X 80 398 148 HOH HOH . E 3 HOH X 81 399 149 HOH HOH . E 3 HOH X 82 400 152 HOH HOH . E 3 HOH X 83 401 155 HOH HOH . E 3 HOH X 84 402 162 HOH HOH . E 3 HOH X 85 403 163 HOH HOH . E 3 HOH X 86 404 169 HOH HOH . E 3 HOH X 87 405 174 HOH HOH . E 3 HOH X 88 406 178 HOH HOH . E 3 HOH X 89 407 182 HOH HOH . E 3 HOH X 90 408 185 HOH HOH . E 3 HOH X 91 409 188 HOH HOH . E 3 HOH X 92 410 191 HOH HOH . E 3 HOH X 93 411 201 HOH HOH . E 3 HOH X 94 412 203 HOH HOH . E 3 HOH X 95 413 420 HOH HOH . E 3 HOH X 96 414 421 HOH HOH . E 3 HOH X 97 415 1 HOH HOH . E 3 HOH X 98 416 3 HOH HOH . E 3 HOH X 99 417 4 HOH HOH . E 3 HOH X 100 418 5 HOH HOH . E 3 HOH X 101 419 6 HOH HOH . E 3 HOH X 102 420 7 HOH HOH . E 3 HOH X 103 421 8 HOH HOH . E 3 HOH X 104 422 9 HOH HOH . E 3 HOH X 105 423 10 HOH HOH . E 3 HOH X 106 424 11 HOH HOH . E 3 HOH X 107 425 12 HOH HOH . E 3 HOH X 108 426 13 HOH HOH . E 3 HOH X 109 427 14 HOH HOH . E 3 HOH X 110 428 15 HOH HOH . E 3 HOH X 111 429 18 HOH HOH . E 3 HOH X 112 430 19 HOH HOH . E 3 HOH X 113 431 20 HOH HOH . E 3 HOH X 114 432 21 HOH HOH . E 3 HOH X 115 433 22 HOH HOH . E 3 HOH X 116 434 23 HOH HOH . E 3 HOH X 117 435 24 HOH HOH . E 3 HOH X 118 436 26 HOH HOH . E 3 HOH X 119 437 27 HOH HOH . E 3 HOH X 120 438 28 HOH HOH . E 3 HOH X 121 439 29 HOH HOH . E 3 HOH X 122 440 31 HOH HOH . E 3 HOH X 123 441 32 HOH HOH . E 3 HOH X 124 442 33 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . B 2 22.204 -17.209 44.579 1 83.2 ? S SO4 315 X 1 HETATM 2 O O1 SO4 . . . B 2 23.256 -16.172 44.399 1 81.86 ? O1 SO4 315 X 1 HETATM 3 O O2 SO4 . . . B 2 21.615 -17.458 43.256 1 79.37 ? O2 SO4 315 X 1 HETATM 4 O O3 SO4 . . . B 2 21.248 -16.694 45.574 1 83.28 ? O3 SO4 315 X 1 HETATM 5 O O4 SO4 . . . B 2 22.665 -18.492 45.17 1 81.25 ? O4 SO4 315 X 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #