data_3EEH # _model_server_result.job_id hY3p_AcMw5wFAzWErh-7fg _model_server_result.datetime_utc '2024-12-22 05:57:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3eeh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":126}' # _entry.id 3EEH # _exptl.entry_id 3EEH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 178.226 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3EEH _cell.length_a 96.558 _cell.length_b 96.558 _cell.length_c 40.131 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3EEH _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H18 O4' _chem_comp.formula_weight 178.226 _chem_comp.id PG5 _chem_comp.mon_nstd_flag . _chem_comp.name 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PG5 sing 237 n n C1 H11 PG5 sing 238 n n C1 H12 PG5 sing 239 n n C1 H13 PG5 sing 240 n n O1 C2 PG5 sing 241 n n C2 C3 PG5 sing 242 n n C2 H21 PG5 sing 243 n n C2 H22 PG5 sing 244 n n C3 O2 PG5 sing 245 n n C3 H31 PG5 sing 246 n n C3 H32 PG5 sing 247 n n O2 C4 PG5 sing 248 n n C4 C5 PG5 sing 249 n n C4 H41 PG5 sing 250 n n C4 H42 PG5 sing 251 n n C5 O3 PG5 sing 252 n n C5 H51 PG5 sing 253 n n C5 H52 PG5 sing 254 n n O3 C6 PG5 sing 255 n n C6 C7 PG5 sing 256 n n C6 H61 PG5 sing 257 n n C6 H62 PG5 sing 258 n n C7 O4 PG5 sing 259 n n C7 H71 PG5 sing 260 n n C7 H72 PG5 sing 261 n n O4 C8 PG5 sing 262 n n C8 H81 PG5 sing 263 n n C8 H82 PG5 sing 264 n n C8 H83 PG5 sing 265 n n # _atom_sites.entry_id 3EEH _atom_sites.fract_transf_matrix[1][1] 0.010356 _atom_sites.fract_transf_matrix[1][2] 0.005979 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011959 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024918 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PG5 A 1 126 1 PG5 PG5 . C 3 HOH A 1 127 2 HOH HOH . C 3 HOH A 2 128 3 HOH HOH . C 3 HOH A 3 129 4 HOH HOH . C 3 HOH A 4 130 5 HOH HOH . C 3 HOH A 5 131 6 HOH HOH . C 3 HOH A 6 132 7 HOH HOH . C 3 HOH A 7 133 8 HOH HOH . C 3 HOH A 8 134 9 HOH HOH . C 3 HOH A 9 135 10 HOH HOH . C 3 HOH A 10 136 11 HOH HOH . C 3 HOH A 11 137 12 HOH HOH . C 3 HOH A 12 138 13 HOH HOH . C 3 HOH A 13 139 14 HOH HOH . C 3 HOH A 14 140 15 HOH HOH . C 3 HOH A 15 141 16 HOH HOH . C 3 HOH A 16 142 17 HOH HOH . C 3 HOH A 17 143 18 HOH HOH . C 3 HOH A 18 144 20 HOH HOH . C 3 HOH A 19 145 21 HOH HOH . C 3 HOH A 20 146 22 HOH HOH . C 3 HOH A 21 147 23 HOH HOH . C 3 HOH A 22 148 24 HOH HOH . C 3 HOH A 23 149 25 HOH HOH . C 3 HOH A 24 150 26 HOH HOH . C 3 HOH A 25 151 27 HOH HOH . C 3 HOH A 26 152 28 HOH HOH . C 3 HOH A 27 153 29 HOH HOH . C 3 HOH A 28 154 31 HOH HOH . C 3 HOH A 29 155 32 HOH HOH . C 3 HOH A 30 156 33 HOH HOH . C 3 HOH A 31 157 34 HOH HOH . C 3 HOH A 32 158 35 HOH HOH . C 3 HOH A 33 159 36 HOH HOH . C 3 HOH A 34 160 37 HOH HOH . C 3 HOH A 35 161 38 HOH HOH . C 3 HOH A 36 162 39 HOH HOH . C 3 HOH A 37 163 40 HOH HOH . C 3 HOH A 38 164 42 HOH HOH . C 3 HOH A 39 165 43 HOH HOH . C 3 HOH A 40 166 45 HOH HOH . C 3 HOH A 41 167 46 HOH HOH . C 3 HOH A 42 168 48 HOH HOH . C 3 HOH A 43 169 49 HOH HOH . C 3 HOH A 44 170 50 HOH HOH . C 3 HOH A 45 171 51 HOH HOH . C 3 HOH A 46 172 52 HOH HOH . C 3 HOH A 47 173 53 HOH HOH . C 3 HOH A 48 174 55 HOH HOH . C 3 HOH A 49 175 56 HOH HOH . C 3 HOH A 50 176 57 HOH HOH . C 3 HOH A 51 177 60 HOH HOH . C 3 HOH A 52 178 62 HOH HOH . C 3 HOH A 53 179 63 HOH HOH . C 3 HOH A 54 180 65 HOH HOH . C 3 HOH A 55 181 66 HOH HOH . C 3 HOH A 56 182 67 HOH HOH . C 3 HOH A 57 183 68 HOH HOH . C 3 HOH A 58 184 69 HOH HOH . C 3 HOH A 59 185 70 HOH HOH . C 3 HOH A 60 186 71 HOH HOH . C 3 HOH A 61 187 72 HOH HOH . C 3 HOH A 62 188 73 HOH HOH . C 3 HOH A 63 189 74 HOH HOH . C 3 HOH A 64 190 75 HOH HOH . C 3 HOH A 65 191 77 HOH HOH . C 3 HOH A 66 192 78 HOH HOH . C 3 HOH A 67 193 79 HOH HOH . C 3 HOH A 68 194 80 HOH HOH . C 3 HOH A 69 195 81 HOH HOH . C 3 HOH A 70 196 82 HOH HOH . C 3 HOH A 71 197 85 HOH HOH . C 3 HOH A 72 198 86 HOH HOH . C 3 HOH A 73 199 87 HOH HOH . C 3 HOH A 74 200 91 HOH HOH . C 3 HOH A 75 201 92 HOH HOH . C 3 HOH A 76 202 93 HOH HOH . C 3 HOH A 77 203 94 HOH HOH . C 3 HOH A 78 204 96 HOH HOH . C 3 HOH A 79 205 97 HOH HOH . C 3 HOH A 80 206 101 HOH HOH . C 3 HOH A 81 207 104 HOH HOH . C 3 HOH A 82 208 112 HOH HOH . C 3 HOH A 83 209 113 HOH HOH . C 3 HOH A 84 210 114 HOH HOH . C 3 HOH A 85 211 116 HOH HOH . C 3 HOH A 86 212 118 HOH HOH . C 3 HOH A 87 213 119 HOH HOH . C 3 HOH A 88 214 122 HOH HOH . C 3 HOH A 89 215 124 HOH HOH . C 3 HOH A 90 216 126 HOH HOH . C 3 HOH A 91 217 129 HOH HOH . C 3 HOH A 92 218 132 HOH HOH . C 3 HOH A 93 219 133 HOH HOH . C 3 HOH A 94 220 134 HOH HOH . C 3 HOH A 95 221 135 HOH HOH . C 3 HOH A 96 222 138 HOH HOH . C 3 HOH A 97 223 142 HOH HOH . C 3 HOH A 98 224 143 HOH HOH . C 3 HOH A 99 225 146 HOH HOH . C 3 HOH A 100 226 148 HOH HOH . C 3 HOH A 101 227 149 HOH HOH . C 3 HOH A 102 228 150 HOH HOH . C 3 HOH A 103 229 153 HOH HOH . C 3 HOH A 104 230 154 HOH HOH . C 3 HOH A 105 231 155 HOH HOH . C 3 HOH A 106 232 159 HOH HOH . C 3 HOH A 107 233 161 HOH HOH . C 3 HOH A 108 234 169 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PG5 . . . B 2 58.318 40.61 26.946 1 41.7 ? C1 PG5 126 A 1 HETATM 2 O O1 PG5 . . . B 2 58.957 40.357 28.211 1 41.94 ? O1 PG5 126 A 1 HETATM 3 C C2 PG5 . . . B 2 59.478 39.036 28.451 1 39.75 ? C2 PG5 126 A 1 HETATM 4 C C3 PG5 . . . B 2 60.583 39.101 29.501 1 40.64 ? C3 PG5 126 A 1 HETATM 5 O O2 PG5 . . . B 2 60.854 37.769 30.027 1 47.88 ? O2 PG5 126 A 1 HETATM 6 C C4 PG5 . . . B 2 61.94 37.601 30.96 1 44.11 ? C4 PG5 126 A 1 HETATM 7 C C5 PG5 . . . B 2 61.538 37.988 32.378 1 46.96 ? C5 PG5 126 A 1 HETATM 8 O O3 PG5 . . . B 2 60.522 37.168 33.008 1 46.56 ? O3 PG5 126 A 1 HETATM 9 C C6 PG5 . . . B 2 60.298 37.61 34.357 1 44.8 ? C6 PG5 126 A 1 HETATM 10 C C7 PG5 . . . B 2 59.31 36.733 35.091 1 45.64 ? C7 PG5 126 A 1 HETATM 11 O O4 PG5 . . . B 2 59.121 37.219 36.426 1 47.96 ? O4 PG5 126 A 1 HETATM 12 C C8 PG5 . . . B 2 58.025 36.552 37.061 1 46.46 ? C8 PG5 126 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 217 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 12 #