data_3EFO # _model_server_result.job_id Sy7hT3iGTAD9Uefauqnfgw _model_server_result.datetime_utc '2025-07-14 19:17:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3efo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1034}' # _entry.id 3EFO # _exptl.entry_id 3EFO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3EFO _cell.length_a 103.06 _cell.length_b 140.83 _cell.length_c 152.25 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3EFO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 59 B CYS 322 1_555 B SG CYS 507 B CYS 770 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.983 ? metalc ? metalc1 A SG CYS 61 A CYS 61 1_555 D ZN ZN . A ZN 766 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.436 ? metalc ? metalc2 A SG CYS 66 A CYS 66 1_555 D ZN ZN . A ZN 766 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc3 A SG CYS 85 A CYS 85 1_555 D ZN ZN . A ZN 766 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc4 A SG CYS 88 A CYS 88 1_555 D ZN ZN . A ZN 766 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc5 B SG CYS 101 B CYS 364 1_555 E ZN ZN . B ZN 1034 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.56 ? metalc ? metalc6 B SG CYS 104 B CYS 367 1_555 E ZN ZN . B ZN 1034 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc7 B SG CYS 123 B CYS 386 1_555 E ZN ZN . B ZN 1034 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc8 B SG CYS 126 B CYS 389 1_555 E ZN ZN . B ZN 1034 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3EFO _atom_sites.fract_transf_matrix[1][1] 0.009703 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007101 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006568 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN A 1 766 763 ZN ZN . E 4 ZN B 1 1034 1034 ZN ZN . F 5 HOH A 1 767 1 HOH WAT . F 5 HOH A 2 768 2 HOH WAT . F 5 HOH A 3 769 5 HOH WAT . F 5 HOH A 4 770 7 HOH WAT . F 5 HOH A 5 771 8 HOH WAT . F 5 HOH A 6 772 9 HOH WAT . F 5 HOH A 7 773 14 HOH WAT . F 5 HOH A 8 774 15 HOH WAT . F 5 HOH A 9 775 16 HOH WAT . F 5 HOH A 10 776 17 HOH WAT . F 5 HOH A 11 777 18 HOH WAT . F 5 HOH A 12 778 19 HOH WAT . F 5 HOH A 13 779 22 HOH WAT . F 5 HOH A 14 780 23 HOH WAT . F 5 HOH A 15 781 25 HOH WAT . F 5 HOH A 16 782 27 HOH WAT . F 5 HOH A 17 783 28 HOH WAT . F 5 HOH A 18 784 29 HOH WAT . F 5 HOH A 19 785 30 HOH WAT . F 5 HOH A 20 786 33 HOH WAT . F 5 HOH A 21 787 34 HOH WAT . F 5 HOH A 22 788 37 HOH WAT . F 5 HOH A 23 789 38 HOH WAT . F 5 HOH A 24 790 39 HOH WAT . F 5 HOH A 25 791 40 HOH WAT . F 5 HOH A 26 792 42 HOH WAT . F 5 HOH A 27 793 43 HOH WAT . F 5 HOH A 28 794 45 HOH WAT . F 5 HOH A 29 795 46 HOH WAT . F 5 HOH A 30 796 48 HOH WAT . F 5 HOH A 31 797 52 HOH WAT . F 5 HOH A 32 798 53 HOH WAT . F 5 HOH A 33 799 54 HOH WAT . F 5 HOH A 34 800 55 HOH WAT . F 5 HOH A 35 801 56 HOH WAT . F 5 HOH A 36 802 57 HOH WAT . F 5 HOH A 37 803 58 HOH WAT . F 5 HOH A 38 804 62 HOH WAT . F 5 HOH A 39 805 63 HOH WAT . F 5 HOH A 40 806 64 HOH WAT . F 5 HOH A 41 807 69 HOH WAT . F 5 HOH A 42 808 71 HOH WAT . F 5 HOH A 43 809 74 HOH WAT . F 5 HOH A 44 810 77 HOH WAT . F 5 HOH A 45 811 78 HOH WAT . F 5 HOH A 46 812 81 HOH WAT . F 5 HOH A 47 813 82 HOH WAT . F 5 HOH A 48 814 83 HOH WAT . F 5 HOH A 49 815 84 HOH WAT . F 5 HOH A 50 816 85 HOH WAT . F 5 HOH A 51 817 86 HOH WAT . F 5 HOH A 52 818 94 HOH WAT . F 5 HOH A 53 819 97 HOH WAT . F 5 HOH A 54 820 101 HOH WAT . F 5 HOH A 55 821 104 HOH WAT . F 5 HOH A 56 822 106 HOH WAT . F 5 HOH A 57 823 107 HOH WAT . F 5 HOH A 58 824 108 HOH WAT . F 5 HOH A 59 825 110 HOH WAT . F 5 HOH A 60 826 112 HOH WAT . F 5 HOH A 61 827 115 HOH WAT . F 5 HOH A 62 828 116 HOH WAT . F 5 HOH A 63 829 118 HOH WAT . F 5 HOH A 64 830 119 HOH WAT . F 5 HOH A 65 831 120 HOH WAT . F 5 HOH A 66 832 125 HOH WAT . F 5 HOH A 67 833 127 HOH WAT . F 5 HOH A 68 834 128 HOH WAT . F 5 HOH A 69 835 133 HOH WAT . F 5 HOH A 70 836 134 HOH WAT . F 5 HOH A 71 837 135 HOH WAT . F 5 HOH A 72 838 136 HOH WAT . F 5 HOH A 73 839 137 HOH WAT . F 5 HOH A 74 840 139 HOH WAT . F 5 HOH A 75 841 140 HOH WAT . F 5 HOH A 76 842 143 HOH WAT . F 5 HOH A 77 843 145 HOH WAT . F 5 HOH A 78 844 149 HOH WAT . F 5 HOH A 79 845 150 HOH WAT . G 5 HOH B 1 1035 3 HOH WAT . G 5 HOH B 2 1036 4 HOH WAT . G 5 HOH B 3 1037 6 HOH WAT . G 5 HOH B 4 1038 10 HOH WAT . G 5 HOH B 5 1039 11 HOH WAT . G 5 HOH B 6 1040 12 HOH WAT . G 5 HOH B 7 1041 13 HOH WAT . G 5 HOH B 8 1042 20 HOH WAT . G 5 HOH B 9 1043 21 HOH WAT . G 5 HOH B 10 1044 24 HOH WAT . G 5 HOH B 11 1045 26 HOH WAT . G 5 HOH B 12 1046 31 HOH WAT . G 5 HOH B 13 1047 32 HOH WAT . G 5 HOH B 14 1048 35 HOH WAT . G 5 HOH B 15 1049 36 HOH WAT . G 5 HOH B 16 1050 41 HOH WAT . G 5 HOH B 17 1051 44 HOH WAT . G 5 HOH B 18 1052 47 HOH WAT . G 5 HOH B 19 1053 49 HOH WAT . G 5 HOH B 20 1054 50 HOH WAT . G 5 HOH B 21 1055 51 HOH WAT . G 5 HOH B 22 1056 59 HOH WAT . G 5 HOH B 23 1057 60 HOH WAT . G 5 HOH B 24 1058 61 HOH WAT . G 5 HOH B 25 1059 65 HOH WAT . G 5 HOH B 26 1060 66 HOH WAT . G 5 HOH B 27 1061 67 HOH WAT . G 5 HOH B 28 1062 68 HOH WAT . G 5 HOH B 29 1063 70 HOH WAT . G 5 HOH B 30 1064 72 HOH WAT . G 5 HOH B 31 1065 73 HOH WAT . G 5 HOH B 32 1066 75 HOH WAT . G 5 HOH B 33 1067 76 HOH WAT . G 5 HOH B 34 1068 79 HOH WAT . G 5 HOH B 35 1069 80 HOH WAT . G 5 HOH B 36 1070 87 HOH WAT . G 5 HOH B 37 1071 88 HOH WAT . G 5 HOH B 38 1072 89 HOH WAT . G 5 HOH B 39 1073 90 HOH WAT . G 5 HOH B 40 1074 91 HOH WAT . G 5 HOH B 41 1075 92 HOH WAT . G 5 HOH B 42 1076 93 HOH WAT . G 5 HOH B 43 1077 95 HOH WAT . G 5 HOH B 44 1078 96 HOH WAT . G 5 HOH B 45 1079 98 HOH WAT . G 5 HOH B 46 1080 99 HOH WAT . G 5 HOH B 47 1081 100 HOH WAT . G 5 HOH B 48 1082 102 HOH WAT . G 5 HOH B 49 1083 103 HOH WAT . G 5 HOH B 50 1084 105 HOH WAT . G 5 HOH B 51 1085 109 HOH WAT . G 5 HOH B 52 1086 111 HOH WAT . G 5 HOH B 53 1087 113 HOH WAT . G 5 HOH B 54 1088 114 HOH WAT . G 5 HOH B 55 1089 117 HOH WAT . G 5 HOH B 56 1090 121 HOH WAT . G 5 HOH B 57 1091 122 HOH WAT . G 5 HOH B 58 1092 123 HOH WAT . G 5 HOH B 59 1093 124 HOH WAT . G 5 HOH B 60 1094 126 HOH WAT . G 5 HOH B 61 1095 129 HOH WAT . G 5 HOH B 62 1096 130 HOH WAT . G 5 HOH B 63 1097 131 HOH WAT . G 5 HOH B 64 1098 132 HOH WAT . G 5 HOH B 65 1099 138 HOH WAT . G 5 HOH B 66 1100 141 HOH WAT . G 5 HOH B 67 1101 142 HOH WAT . G 5 HOH B 68 1102 144 HOH WAT . G 5 HOH B 69 1103 146 HOH WAT . G 5 HOH B 70 1104 147 HOH WAT . G 5 HOH B 71 1105 148 HOH WAT . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 4 _atom_site.Cartn_x -41.487 _atom_site.Cartn_y -0.91 _atom_site.Cartn_z -30.272 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 57.44 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1034 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 356 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #