data_3EGR # _model_server_result.job_id dTfW-A-EwdZHI247bkonLQ _model_server_result.datetime_utc '2024-10-12 21:22:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3egr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":96}' # _entry.id 3EGR # _exptl.entry_id 3EGR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.082 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'THIOCYANATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3EGR _cell.length_a 93.26 _cell.length_b 93.26 _cell.length_c 114.698 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3EGR _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_555 x,x-y,-z+1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 0 0 19.116333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C HIS 38 A HIS 37 1_555 A N MSE 39 A MSE 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale2 A C MSE 39 A MSE 38 1_555 A N ALA 40 A ALA 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 B C HIS 38 B HIS 37 1_555 B N MSE 39 B MSE 38 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 B C HIS 38 B HIS 37 1_555 B N MSE 39 B MSE 38 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale5 B C MSE 39 B MSE 38 1_555 B N ALA 40 B ALA 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? # _chem_comp.formula 'C N S -1' _chem_comp.formula_weight 58.082 _chem_comp.id SCN _chem_comp.mon_nstd_flag . _chem_comp.name 'THIOCYANATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S C SCN sing 277 n n C N SCN trip 278 n n # _atom_sites.entry_id 3EGR _atom_sites.fract_transf_matrix[1][1] 0.010723 _atom_sites.fract_transf_matrix[1][2] 0.006191 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012382 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008719 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SCN A 1 96 1 SCN SCN . D 2 SCN B 1 96 2 SCN SCN . E 3 HOH A 1 97 4 HOH HOH . E 3 HOH A 2 98 5 HOH HOH . E 3 HOH A 3 99 6 HOH HOH . E 3 HOH A 4 100 7 HOH HOH . E 3 HOH A 5 101 8 HOH HOH . E 3 HOH A 6 102 9 HOH HOH . E 3 HOH A 7 103 10 HOH HOH . E 3 HOH A 8 104 11 HOH HOH . E 3 HOH A 9 105 12 HOH HOH . E 3 HOH A 10 106 13 HOH HOH . E 3 HOH A 11 107 14 HOH HOH . E 3 HOH A 12 108 15 HOH HOH . E 3 HOH A 13 109 16 HOH HOH . E 3 HOH A 14 110 17 HOH HOH . E 3 HOH A 15 111 18 HOH HOH . E 3 HOH A 16 112 19 HOH HOH . E 3 HOH A 17 113 20 HOH HOH . E 3 HOH A 18 114 21 HOH HOH . E 3 HOH A 19 115 22 HOH HOH . E 3 HOH A 20 116 23 HOH HOH . E 3 HOH A 21 117 24 HOH HOH . E 3 HOH A 22 118 25 HOH HOH . E 3 HOH A 23 119 26 HOH HOH . E 3 HOH A 24 120 27 HOH HOH . E 3 HOH A 25 121 28 HOH HOH . E 3 HOH A 26 122 29 HOH HOH . E 3 HOH A 27 123 30 HOH HOH . E 3 HOH A 28 124 31 HOH HOH . E 3 HOH A 29 125 32 HOH HOH . E 3 HOH A 30 126 33 HOH HOH . E 3 HOH A 31 127 34 HOH HOH . E 3 HOH A 32 128 35 HOH HOH . E 3 HOH A 33 129 36 HOH HOH . E 3 HOH A 34 130 37 HOH HOH . E 3 HOH A 35 131 38 HOH HOH . E 3 HOH A 36 132 39 HOH HOH . E 3 HOH A 37 133 40 HOH HOH . E 3 HOH A 38 134 41 HOH HOH . E 3 HOH A 39 135 42 HOH HOH . E 3 HOH A 40 136 43 HOH HOH . E 3 HOH A 41 137 44 HOH HOH . E 3 HOH A 42 138 45 HOH HOH . E 3 HOH A 43 139 46 HOH HOH . E 3 HOH A 44 140 47 HOH HOH . E 3 HOH A 45 141 48 HOH HOH . E 3 HOH A 46 142 49 HOH HOH . E 3 HOH A 47 143 50 HOH HOH . E 3 HOH A 48 144 51 HOH HOH . E 3 HOH A 49 145 52 HOH HOH . E 3 HOH A 50 146 53 HOH HOH . E 3 HOH A 51 147 54 HOH HOH . E 3 HOH A 52 148 55 HOH HOH . E 3 HOH A 53 149 56 HOH HOH . E 3 HOH A 54 150 57 HOH HOH . E 3 HOH A 55 151 58 HOH HOH . E 3 HOH A 56 152 59 HOH HOH . E 3 HOH A 57 153 60 HOH HOH . F 3 HOH B 1 97 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SCN . . . D 2 32.735 11.899 19.166 1 68.6 ? S SCN 96 B 1 HETATM 2 C C SCN . . . D 2 33.538 13.432 19.509 1 63.48 ? C SCN 96 B 1 HETATM 3 N N SCN . . . D 2 34.324 14.301 19.73 1 62.49 ? N SCN 96 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 342 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 3 #