data_3EHX # _model_server_result.job_id hhHk49vveLbCGz5pM8IPHA _model_server_result.datetime_utc '2024-10-18 15:31:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ehx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":266}' # _entry.id 3EHX # _exptl.entry_id 3EHX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.9 _cell.angle_gamma 90 _cell.entry_id 3EHX _cell.length_a 51.181 _cell.length_b 60.554 _cell.length_c 54.428 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3EHX _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 G O3 BDL . A BDL 0 1_555 B ZN ZN . A ZN 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? metalc ? metalc2 A OD1 ASP 19 A ASP 124 1_555 E CA CA . A CA 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.566 ? metalc ? metalc3 A OD2 ASP 19 A ASP 124 1_555 E CA CA . A CA 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? metalc ? metalc4 A O ASP 53 A ASP 158 1_555 D CA CA . A CA 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc5 A NE2 HIS 63 A HIS 168 1_555 C ZN ZN . A ZN 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? metalc ? metalc6 A OD1 ASP 65 A ASP 170 1_555 C ZN ZN . A ZN 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.933 ? metalc ? metalc7 A OD2 ASP 70 A ASP 175 1_555 F CA CA . A CA 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc8 A O GLY 71 A GLY 176 1_555 F CA CA . A CA 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc9 A O GLY 73 A GLY 178 1_555 F CA CA . A CA 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc10 A O ILE 75 A ILE 180 1_555 F CA CA . A CA 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc11 A NE2 HIS 78 A HIS 183 1_555 C ZN ZN . A ZN 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? metalc ? metalc12 A O GLY 85 A GLY 190 1_555 D CA CA . A CA 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc13 A O GLY 87 A GLY 192 1_555 D CA CA . A CA 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc14 A OD2 ASP 89 A ASP 194 1_555 D CA CA . A CA 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.515 ? metalc ? metalc15 A ND1 HIS 91 A HIS 196 1_555 C ZN ZN . A ZN 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc16 A OD1 ASP 93 A ASP 198 1_555 F CA CA . A CA 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc17 A O GLU 94 A GLU 199 1_555 E CA CA . A CA 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc18 A OE2 GLU 94 A GLU 199 1_555 E CA CA . A CA 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc19 A O GLU 96 A GLU 201 1_555 E CA CA . A CA 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.473 ? metalc ? metalc20 A OE2 GLU 96 A GLU 201 1_555 F CA CA . A CA 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc21 A NE2 HIS 113 A HIS 218 1_555 B ZN ZN . A ZN 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc22 A NE2 HIS 117 A HIS 222 1_555 B ZN ZN . A ZN 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc23 A NE2 HIS 123 A HIS 228 1_555 B ZN ZN . A ZN 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.942 ? metalc ? metalc24 D CA CA . A CA 266 1_555 H O HOH . A HOH 287 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.514 ? metalc ? metalc25 E CA CA . A CA 267 1_555 H O HOH . A HOH 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.633 ? metalc ? metalc26 E CA CA . A CA 267 1_555 H O HOH . A HOH 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.632 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3EHX _atom_sites.fract_transf_matrix[1][1] 0.019539 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.009487 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016514 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020424 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 264 264 ZN ZN . C 2 ZN A 1 265 265 ZN ZN . D 3 CA A 1 266 266 CA CA . E 3 CA A 1 267 267 CA CA . F 3 CA A 1 268 268 CA CA . G 4 BDL A 1 0 0 BDL BDL . H 5 HOH A 1 269 269 HOH HOH . H 5 HOH A 2 270 270 HOH HOH . H 5 HOH A 3 271 271 HOH HOH . H 5 HOH A 4 272 272 HOH HOH . H 5 HOH A 5 273 273 HOH HOH . H 5 HOH A 6 274 274 HOH HOH . H 5 HOH A 7 275 275 HOH HOH . H 5 HOH A 8 276 276 HOH HOH . H 5 HOH A 9 277 277 HOH HOH . H 5 HOH A 10 278 278 HOH HOH . H 5 HOH A 11 279 279 HOH HOH . H 5 HOH A 12 280 280 HOH HOH . H 5 HOH A 13 281 281 HOH HOH . H 5 HOH A 14 282 282 HOH HOH . H 5 HOH A 15 283 283 HOH HOH . H 5 HOH A 16 284 284 HOH HOH . H 5 HOH A 17 285 285 HOH HOH . H 5 HOH A 18 286 286 HOH HOH . H 5 HOH A 19 287 287 HOH HOH . H 5 HOH A 20 288 288 HOH HOH . H 5 HOH A 21 289 289 HOH HOH . H 5 HOH A 22 290 290 HOH HOH . H 5 HOH A 23 291 291 HOH HOH . H 5 HOH A 24 292 292 HOH HOH . H 5 HOH A 25 293 293 HOH HOH . H 5 HOH A 26 294 294 HOH HOH . H 5 HOH A 27 295 295 HOH HOH . H 5 HOH A 28 296 296 HOH HOH . H 5 HOH A 29 297 297 HOH HOH . H 5 HOH A 30 298 298 HOH HOH . H 5 HOH A 31 299 299 HOH HOH . H 5 HOH A 32 300 300 HOH HOH . H 5 HOH A 33 301 301 HOH HOH . H 5 HOH A 34 302 302 HOH HOH . H 5 HOH A 35 303 303 HOH HOH . H 5 HOH A 36 304 304 HOH HOH . H 5 HOH A 37 305 305 HOH HOH . H 5 HOH A 38 306 306 HOH HOH . H 5 HOH A 39 307 307 HOH HOH . H 5 HOH A 40 308 308 HOH HOH . H 5 HOH A 41 309 309 HOH HOH . H 5 HOH A 42 310 310 HOH HOH . H 5 HOH A 43 311 311 HOH HOH . H 5 HOH A 44 312 312 HOH HOH . H 5 HOH A 45 313 313 HOH HOH . H 5 HOH A 46 314 314 HOH HOH . H 5 HOH A 47 315 315 HOH HOH . H 5 HOH A 48 316 316 HOH HOH . H 5 HOH A 49 317 317 HOH HOH . H 5 HOH A 50 318 318 HOH HOH . H 5 HOH A 51 319 319 HOH HOH . H 5 HOH A 52 320 320 HOH HOH . H 5 HOH A 53 321 321 HOH HOH . H 5 HOH A 54 322 322 HOH HOH . H 5 HOH A 55 323 323 HOH HOH . H 5 HOH A 56 324 324 HOH HOH . H 5 HOH A 57 325 325 HOH HOH . H 5 HOH A 58 326 326 HOH HOH . H 5 HOH A 59 327 327 HOH HOH . H 5 HOH A 60 328 328 HOH HOH . H 5 HOH A 61 329 329 HOH HOH . H 5 HOH A 62 330 330 HOH HOH . H 5 HOH A 63 331 331 HOH HOH . H 5 HOH A 64 332 332 HOH HOH . H 5 HOH A 65 333 333 HOH HOH . H 5 HOH A 66 334 334 HOH HOH . H 5 HOH A 67 335 335 HOH HOH . H 5 HOH A 68 336 336 HOH HOH . H 5 HOH A 69 337 337 HOH HOH . H 5 HOH A 70 338 338 HOH HOH . H 5 HOH A 71 339 339 HOH HOH . H 5 HOH A 72 340 340 HOH HOH . H 5 HOH A 73 341 341 HOH HOH . H 5 HOH A 74 342 342 HOH HOH . H 5 HOH A 75 343 343 HOH HOH . H 5 HOH A 76 344 344 HOH HOH . H 5 HOH A 77 345 345 HOH HOH . H 5 HOH A 78 346 346 HOH HOH . H 5 HOH A 79 347 347 HOH HOH . H 5 HOH A 80 348 348 HOH HOH . H 5 HOH A 81 349 349 HOH HOH . H 5 HOH A 82 350 350 HOH HOH . H 5 HOH A 83 351 351 HOH HOH . H 5 HOH A 84 352 352 HOH HOH . H 5 HOH A 85 353 353 HOH HOH . H 5 HOH A 86 354 354 HOH HOH . H 5 HOH A 87 355 355 HOH HOH . H 5 HOH A 88 356 356 HOH HOH . H 5 HOH A 89 357 357 HOH HOH . H 5 HOH A 90 358 358 HOH HOH . H 5 HOH A 91 359 359 HOH HOH . H 5 HOH A 92 360 360 HOH HOH . H 5 HOH A 93 361 361 HOH HOH . H 5 HOH A 94 362 362 HOH HOH . H 5 HOH A 95 363 363 HOH HOH . H 5 HOH A 96 364 364 HOH HOH . H 5 HOH A 97 365 365 HOH HOH . H 5 HOH A 98 366 366 HOH HOH . H 5 HOH A 99 367 367 HOH HOH . H 5 HOH A 100 368 368 HOH HOH . H 5 HOH A 101 369 369 HOH HOH . H 5 HOH A 102 370 370 HOH HOH . H 5 HOH A 103 371 371 HOH HOH . H 5 HOH A 104 372 372 HOH HOH . H 5 HOH A 105 373 373 HOH HOH . H 5 HOH A 106 374 374 HOH HOH . H 5 HOH A 107 375 375 HOH HOH . H 5 HOH A 108 376 376 HOH HOH . H 5 HOH A 109 377 377 HOH HOH . H 5 HOH A 110 378 378 HOH HOH . H 5 HOH A 111 379 379 HOH HOH . H 5 HOH A 112 380 380 HOH HOH . H 5 HOH A 113 381 381 HOH HOH . H 5 HOH A 114 382 382 HOH HOH . H 5 HOH A 115 383 383 HOH HOH . H 5 HOH A 116 384 384 HOH HOH . H 5 HOH A 117 385 385 HOH HOH . H 5 HOH A 118 386 386 HOH HOH . H 5 HOH A 119 387 387 HOH HOH . H 5 HOH A 120 388 388 HOH HOH . H 5 HOH A 121 389 389 HOH HOH . H 5 HOH A 122 390 390 HOH HOH . H 5 HOH A 123 391 391 HOH HOH . H 5 HOH A 124 392 392 HOH HOH . H 5 HOH A 125 393 393 HOH HOH . H 5 HOH A 126 394 394 HOH HOH . H 5 HOH A 127 395 395 HOH HOH . H 5 HOH A 128 396 396 HOH HOH . H 5 HOH A 129 397 397 HOH HOH . H 5 HOH A 130 398 398 HOH HOH . H 5 HOH A 131 399 399 HOH HOH . H 5 HOH A 132 400 400 HOH HOH . H 5 HOH A 133 401 401 HOH HOH . H 5 HOH A 134 402 402 HOH HOH . H 5 HOH A 135 403 403 HOH HOH . H 5 HOH A 136 404 404 HOH HOH . H 5 HOH A 137 405 405 HOH HOH . H 5 HOH A 138 406 406 HOH HOH . H 5 HOH A 139 407 407 HOH HOH . H 5 HOH A 140 408 408 HOH HOH . H 5 HOH A 141 409 409 HOH HOH . H 5 HOH A 142 410 410 HOH HOH . H 5 HOH A 143 411 411 HOH HOH . H 5 HOH A 144 412 412 HOH HOH . H 5 HOH A 145 413 413 HOH HOH . H 5 HOH A 146 414 414 HOH HOH . H 5 HOH A 147 415 415 HOH HOH . H 5 HOH A 148 416 416 HOH HOH . H 5 HOH A 149 417 417 HOH HOH . H 5 HOH A 150 418 418 HOH HOH . H 5 HOH A 151 419 419 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 3.032 _atom_site.Cartn_y 11.518 _atom_site.Cartn_z -13.65 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 12.06 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 266 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #