data_3EIK # _model_server_result.job_id cDoiLU9J69EdyU3U0bkfRw _model_server_result.datetime_utc '2025-03-04 06:22:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3eik # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":3318}' # _entry.id 3EIK # _exptl.entry_id 3EIK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3EIK _cell.length_a 104.4 _cell.length_b 104.4 _cell.length_c 129.06 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3EIK _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 3EIK _atom_sites.fract_transf_matrix[1][1] 0.009579 _atom_sites.fract_transf_matrix[1][2] 0.00553 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01106 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007748 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 3318 3318 EDO EDO . D 2 EDO A 1 3319 3318 EDO EDO . E 2 EDO A 1 3320 3318 EDO EDO . F 2 EDO A 1 3321 3318 EDO EDO . G 2 EDO B 1 3318 3318 EDO EDO . H 2 EDO B 1 3319 3318 EDO EDO . I 3 HOH A 1 3322 5 HOH TIP . I 3 HOH A 2 3323 6 HOH TIP . I 3 HOH A 3 3324 8 HOH TIP . I 3 HOH A 4 3325 11 HOH TIP . I 3 HOH A 5 3326 12 HOH TIP . I 3 HOH A 6 3327 17 HOH TIP . I 3 HOH A 7 3328 18 HOH TIP . I 3 HOH A 8 3329 19 HOH TIP . I 3 HOH A 9 3330 20 HOH TIP . I 3 HOH A 10 3331 23 HOH TIP . I 3 HOH A 11 3332 24 HOH TIP . I 3 HOH A 12 3333 25 HOH TIP . I 3 HOH A 13 3334 26 HOH TIP . I 3 HOH A 14 3335 28 HOH TIP . I 3 HOH A 15 3336 34 HOH TIP . I 3 HOH A 16 3337 38 HOH TIP . I 3 HOH A 17 3338 39 HOH TIP . I 3 HOH A 18 3339 41 HOH TIP . I 3 HOH A 19 3340 43 HOH TIP . I 3 HOH A 20 3341 44 HOH TIP . I 3 HOH A 21 3342 48 HOH TIP . I 3 HOH A 22 3343 55 HOH TIP . I 3 HOH A 23 3344 61 HOH TIP . I 3 HOH A 24 3345 62 HOH TIP . I 3 HOH A 25 3346 63 HOH TIP . I 3 HOH A 26 3347 66 HOH TIP . I 3 HOH A 27 3348 67 HOH TIP . I 3 HOH A 28 3349 74 HOH TIP . I 3 HOH A 29 3350 77 HOH TIP . I 3 HOH A 30 3351 83 HOH TIP . I 3 HOH A 31 3352 85 HOH TIP . I 3 HOH A 32 3353 89 HOH TIP . I 3 HOH A 33 3354 90 HOH TIP . I 3 HOH A 34 3355 91 HOH TIP . I 3 HOH A 35 3356 92 HOH TIP . I 3 HOH A 36 3357 94 HOH TIP . I 3 HOH A 37 3358 95 HOH TIP . I 3 HOH A 38 3359 96 HOH TIP . I 3 HOH A 39 3360 97 HOH TIP . I 3 HOH A 40 3361 99 HOH TIP . I 3 HOH A 41 3362 100 HOH TIP . I 3 HOH A 42 3363 101 HOH TIP . I 3 HOH A 43 3364 102 HOH TIP . I 3 HOH A 44 3365 103 HOH TIP . I 3 HOH A 45 3366 104 HOH TIP . I 3 HOH A 46 3367 105 HOH TIP . I 3 HOH A 47 3368 107 HOH TIP . I 3 HOH A 48 3369 109 HOH TIP . I 3 HOH A 49 3370 110 HOH TIP . I 3 HOH A 50 3371 111 HOH TIP . I 3 HOH A 51 3372 114 HOH TIP . I 3 HOH A 52 3373 116 HOH TIP . I 3 HOH A 53 3374 117 HOH TIP . I 3 HOH A 54 3375 118 HOH TIP . I 3 HOH A 55 3376 119 HOH TIP . I 3 HOH A 56 3377 120 HOH TIP . I 3 HOH A 57 3378 121 HOH TIP . I 3 HOH A 58 3379 123 HOH TIP . I 3 HOH A 59 3380 124 HOH TIP . I 3 HOH A 60 3381 130 HOH TIP . I 3 HOH A 61 3382 131 HOH TIP . I 3 HOH A 62 3383 133 HOH TIP . I 3 HOH A 63 3384 134 HOH TIP . I 3 HOH A 64 3385 137 HOH TIP . I 3 HOH A 65 3386 138 HOH TIP . I 3 HOH A 66 3387 143 HOH TIP . I 3 HOH A 67 3388 147 HOH TIP . I 3 HOH A 68 3389 150 HOH TIP . I 3 HOH A 69 3390 151 HOH TIP . I 3 HOH A 70 3391 152 HOH TIP . I 3 HOH A 71 3392 153 HOH TIP . I 3 HOH A 72 3393 154 HOH TIP . I 3 HOH A 73 3394 157 HOH TIP . J 3 HOH B 1 3320 1 HOH TIP . J 3 HOH B 2 3321 2 HOH TIP . J 3 HOH B 3 3322 3 HOH TIP . J 3 HOH B 4 3323 4 HOH TIP . J 3 HOH B 5 3324 7 HOH TIP . J 3 HOH B 6 3325 9 HOH TIP . J 3 HOH B 7 3326 10 HOH TIP . J 3 HOH B 8 3327 14 HOH TIP . J 3 HOH B 9 3328 15 HOH TIP . J 3 HOH B 10 3329 16 HOH TIP . J 3 HOH B 11 3330 21 HOH TIP . J 3 HOH B 12 3331 22 HOH TIP . J 3 HOH B 13 3332 30 HOH TIP . J 3 HOH B 14 3333 31 HOH TIP . J 3 HOH B 15 3334 32 HOH TIP . J 3 HOH B 16 3335 33 HOH TIP . J 3 HOH B 17 3336 35 HOH TIP . J 3 HOH B 18 3337 36 HOH TIP . J 3 HOH B 19 3338 37 HOH TIP . J 3 HOH B 20 3339 40 HOH TIP . J 3 HOH B 21 3340 42 HOH TIP . J 3 HOH B 22 3341 46 HOH TIP . J 3 HOH B 23 3342 47 HOH TIP . J 3 HOH B 24 3343 49 HOH TIP . J 3 HOH B 25 3344 50 HOH TIP . J 3 HOH B 26 3345 52 HOH TIP . J 3 HOH B 27 3346 53 HOH TIP . J 3 HOH B 28 3347 54 HOH TIP . J 3 HOH B 29 3348 57 HOH TIP . J 3 HOH B 30 3349 64 HOH TIP . J 3 HOH B 31 3350 65 HOH TIP . J 3 HOH B 32 3351 68 HOH TIP . J 3 HOH B 33 3352 69 HOH TIP . J 3 HOH B 34 3353 70 HOH TIP . J 3 HOH B 35 3354 71 HOH TIP . J 3 HOH B 36 3355 72 HOH TIP . J 3 HOH B 37 3356 73 HOH TIP . J 3 HOH B 38 3357 75 HOH TIP . J 3 HOH B 39 3358 76 HOH TIP . J 3 HOH B 40 3359 78 HOH TIP . J 3 HOH B 41 3360 80 HOH TIP . J 3 HOH B 42 3361 81 HOH TIP . J 3 HOH B 43 3362 82 HOH TIP . J 3 HOH B 44 3363 84 HOH TIP . J 3 HOH B 45 3364 86 HOH TIP . J 3 HOH B 46 3365 87 HOH TIP . J 3 HOH B 47 3366 88 HOH TIP . J 3 HOH B 48 3367 93 HOH TIP . J 3 HOH B 49 3368 98 HOH TIP . J 3 HOH B 50 3369 106 HOH TIP . J 3 HOH B 51 3370 108 HOH TIP . J 3 HOH B 52 3371 112 HOH TIP . J 3 HOH B 53 3372 113 HOH TIP . J 3 HOH B 54 3373 115 HOH TIP . J 3 HOH B 55 3374 122 HOH TIP . J 3 HOH B 56 3375 125 HOH TIP . J 3 HOH B 57 3376 126 HOH TIP . J 3 HOH B 58 3377 127 HOH TIP . J 3 HOH B 59 3378 128 HOH TIP . J 3 HOH B 60 3379 129 HOH TIP . J 3 HOH B 61 3380 132 HOH TIP . J 3 HOH B 62 3381 135 HOH TIP . J 3 HOH B 63 3382 136 HOH TIP . J 3 HOH B 64 3383 139 HOH TIP . J 3 HOH B 65 3384 140 HOH TIP . J 3 HOH B 66 3385 141 HOH TIP . J 3 HOH B 67 3386 142 HOH TIP . J 3 HOH B 68 3387 144 HOH TIP . J 3 HOH B 69 3388 145 HOH TIP . J 3 HOH B 70 3389 146 HOH TIP . J 3 HOH B 71 3390 148 HOH TIP . J 3 HOH B 72 3391 149 HOH TIP . J 3 HOH B 73 3392 155 HOH TIP . J 3 HOH B 74 3393 156 HOH TIP . J 3 HOH B 75 3394 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 2 44.356 4.172 -29.586 1 33.76 ? C1 EDO 3318 A 1 HETATM 2 O O1 EDO . . . C 2 44.616 5.51 -30.03 1 25.72 ? O1 EDO 3318 A 1 HETATM 3 C C2 EDO . . . C 2 45.319 3.159 -30.22 1 38.69 ? C2 EDO 3318 A 1 HETATM 4 O O2 EDO . . . C 2 44.701 2.487 -31.329 1 38.57 ? O2 EDO 3318 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #