data_3EJ2 # _model_server_result.job_id SQokYC8MYZSxmmu_0_HStg _model_server_result.datetime_utc '2024-11-23 05:51:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ej2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":176}' # _entry.id 3EJ2 # _exptl.entry_id 3EJ2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 218.642 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-amino-1-(4-chlorophenyl)-1H-pyrazole-4-carbonitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3EJ2 _cell.length_a 68.496 _cell.length_b 68.496 _cell.length_c 193.565 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3EJ2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA hexameric 6 software_defined_assembly 1 PISA trimeric 3 software_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C 1 1,2,3,4,5,6 A,B,C 2 1,2,3 A,B,C 3 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 5 'crystal symmetry operation' 5_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 6 'crystal symmetry operation' 6_555 -x,-x+y,-z -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H7 Cl N4' _chem_comp.formula_weight 218.642 _chem_comp.id 928 _chem_comp.mon_nstd_flag . _chem_comp.name 5-amino-1-(4-chlorophenyl)-1H-pyrazole-4-carbonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N15 C14 928 trip 1 n n C14 C4 928 sing 2 n n C4 C3 928 sing 3 n y C4 C5 928 doub 4 n y C3 N2 928 doub 5 n y N2 N1 928 sing 6 n y C5 N13 928 sing 7 n n C5 N1 928 sing 8 n y N1 C6 928 sing 9 n y C6 C11 928 doub 10 n y C6 C7 928 sing 11 n y C11 C10 928 sing 12 n y C10 C9 928 doub 13 n y C9 CL12 928 sing 14 n n C9 C8 928 sing 15 n y C8 C7 928 doub 16 n y C3 H3 928 sing 17 n n N13 HN13 928 sing 18 n n N13 HN1A 928 sing 19 n n C11 H11 928 sing 20 n n C10 H10 928 sing 21 n n C8 H8 928 sing 22 n n C7 H7 928 sing 23 n n # _atom_sites.entry_id 3EJ2 _atom_sites.fract_transf_matrix[1][1] 0.014599 _atom_sites.fract_transf_matrix[1][2] 0.008429 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016858 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005166 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 928 A 1 176 176 928 928 . C 3 HOH A 1 177 177 HOH HOH . C 3 HOH A 2 178 178 HOH HOH . C 3 HOH A 3 179 179 HOH HOH . C 3 HOH A 4 180 180 HOH HOH . C 3 HOH A 5 181 181 HOH HOH . C 3 HOH A 6 182 182 HOH HOH . C 3 HOH A 7 183 183 HOH HOH . C 3 HOH A 8 184 184 HOH HOH . C 3 HOH A 9 185 185 HOH HOH . C 3 HOH A 10 186 186 HOH HOH . C 3 HOH A 11 187 187 HOH HOH . C 3 HOH A 12 188 188 HOH HOH . C 3 HOH A 13 189 189 HOH HOH . C 3 HOH A 14 190 190 HOH HOH . C 3 HOH A 15 191 191 HOH HOH . C 3 HOH A 16 192 192 HOH HOH . C 3 HOH A 17 193 193 HOH HOH . C 3 HOH A 18 194 194 HOH HOH . C 3 HOH A 19 195 195 HOH HOH . C 3 HOH A 20 196 196 HOH HOH . C 3 HOH A 21 197 197 HOH HOH . C 3 HOH A 22 198 198 HOH HOH . C 3 HOH A 23 199 199 HOH HOH . C 3 HOH A 24 200 200 HOH HOH . C 3 HOH A 25 201 201 HOH HOH . C 3 HOH A 26 202 202 HOH HOH . C 3 HOH A 27 203 203 HOH HOH . C 3 HOH A 28 204 204 HOH HOH . C 3 HOH A 29 205 205 HOH HOH . C 3 HOH A 30 206 206 HOH HOH . C 3 HOH A 31 207 207 HOH HOH . C 3 HOH A 32 208 208 HOH HOH . C 3 HOH A 33 209 209 HOH HOH . C 3 HOH A 34 210 210 HOH HOH . C 3 HOH A 35 211 211 HOH HOH . C 3 HOH A 36 212 212 HOH HOH . C 3 HOH A 37 213 213 HOH HOH . C 3 HOH A 38 214 214 HOH HOH . C 3 HOH A 39 215 215 HOH HOH . C 3 HOH A 40 216 216 HOH HOH . C 3 HOH A 41 217 217 HOH HOH . C 3 HOH A 42 218 218 HOH HOH . C 3 HOH A 43 219 219 HOH HOH . C 3 HOH A 44 220 220 HOH HOH . C 3 HOH A 45 221 221 HOH HOH . C 3 HOH A 46 222 222 HOH HOH . C 3 HOH A 47 223 223 HOH HOH . C 3 HOH A 48 224 224 HOH HOH . C 3 HOH A 49 225 225 HOH HOH . C 3 HOH A 50 226 226 HOH HOH . C 3 HOH A 51 227 227 HOH HOH . C 3 HOH A 52 228 228 HOH HOH . C 3 HOH A 53 229 229 HOH HOH . C 3 HOH A 54 230 230 HOH HOH . C 3 HOH A 55 231 231 HOH HOH . C 3 HOH A 56 232 232 HOH HOH . C 3 HOH A 57 233 233 HOH HOH . C 3 HOH A 58 234 234 HOH HOH . C 3 HOH A 59 235 235 HOH HOH . C 3 HOH A 60 236 236 HOH HOH . C 3 HOH A 61 237 237 HOH HOH . C 3 HOH A 62 238 238 HOH HOH . C 3 HOH A 63 239 239 HOH HOH . C 3 HOH A 64 240 240 HOH HOH . C 3 HOH A 65 241 241 HOH HOH . C 3 HOH A 66 242 242 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N15 928 . . . B 2 9.064 -16.302 5.281 1 40.34 ? N15 928 176 A 1 HETATM 2 C C14 928 . . . B 2 9.073 -17.145 4.487 1 44.01 ? C14 928 176 A 1 HETATM 3 C C4 928 . . . B 2 9.084 -18.116 3.571 1 47.4 ? C4 928 176 A 1 HETATM 4 C C3 928 . . . B 2 9.161 -19.476 3.859 1 47.18 ? C3 928 176 A 1 HETATM 5 N N2 928 . . . B 2 9.144 -20.118 2.646 1 48.49 ? N2 928 176 A 1 HETATM 6 C C5 928 . . . B 2 9.02 -17.912 2.216 1 49.3 ? C5 928 176 A 1 HETATM 7 N N13 928 . . . B 2 8.937 -16.722 1.574 1 48.34 ? N13 928 176 A 1 HETATM 8 N N1 928 . . . B 2 9.056 -19.111 1.664 1 49.64 ? N1 928 176 A 1 HETATM 9 C C6 928 . . . B 2 9.015 -19.339 0.348 1 51.58 ? C6 928 176 A 1 HETATM 10 C C11 928 . . . B 2 8.067 -18.745 -0.485 1 52.53 ? C11 928 176 A 1 HETATM 11 C C10 928 . . . B 2 8.012 -18.973 -1.855 1 55.05 ? C10 928 176 A 1 HETATM 12 C C9 928 . . . B 2 8.927 -19.825 -2.451 1 55.53 ? C9 928 176 A 1 HETATM 13 CL CL12 928 . . . B 2 8.871 -20.132 -4.219 1 59.16 ? CL12 928 176 A 1 HETATM 14 C C8 928 . . . B 2 9.885 -20.436 -1.66 1 54.73 ? C8 928 176 A 1 HETATM 15 C C7 928 . . . B 2 9.916 -20.189 -0.293 1 53.01 ? C7 928 176 A 1 # _model_server_stats.io_time_ms 39 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 15 #