data_3EJI
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_model_server_result.job_id            yNAPi77WkdfyV2wB8qDptg 
_model_server_result.datetime_utc      '2024-10-11 10:25:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3eji 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":301}' 
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_entry.id    3EJI 
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_exptl.entry_id    3EJI 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              118.174 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (4S)-2-METHYL-2,4-PENTANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
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_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3EJI 
_cell.length_a            48.2 
_cell.length_b            48.2 
_cell.length_c            63.21 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 3EJI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        76 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41' 
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_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
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_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C6 H14 O2' 
_chem_comp.formula_weight    118.174 
_chem_comp.id                MPD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (4S)-2-METHYL-2,4-PENTANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 MPD sing 224 n n 
C1 H11 MPD sing 225 n n 
C1 H12 MPD sing 226 n n 
C1 H13 MPD sing 227 n n 
C2 O2 MPD sing 228 n n 
C2 CM MPD sing 229 n n 
C2 C3 MPD sing 230 n n 
O2 HO2 MPD sing 231 n n 
CM HM1 MPD sing 232 n n 
CM HM2 MPD sing 233 n n 
CM HM3 MPD sing 234 n n 
C3 C4 MPD sing 235 n n 
C3 H31 MPD sing 236 n n 
C3 H32 MPD sing 237 n n 
C4 O4 MPD sing 238 n n 
C4 C5 MPD sing 239 n n 
C4 H4 MPD sing 240 n n 
O4 HO4 MPD sing 241 n n 
C5 H51 MPD sing 242 n n 
C5 H52 MPD sing 243 n n 
C5 H53 MPD sing 244 n n 
#
_atom_sites.entry_id                     3EJI 
_atom_sites.fract_transf_matrix[1][1]    0.020747 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020747 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01582 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 PO4 A 1 201 201 PO4 PO4 . 
C 3 MPD A 1 301 301 MPD MPD . 
D 4 HOH A 1 302 1 HOH HOH . 
D 4 HOH A 2 303 2 HOH HOH . 
D 4 HOH A 3 304 3 HOH HOH . 
D 4 HOH A 4 305 4 HOH HOH . 
D 4 HOH A 5 306 5 HOH HOH . 
D 4 HOH A 6 307 6 HOH HOH . 
D 4 HOH A 7 308 7 HOH HOH . 
D 4 HOH A 8 309 8 HOH HOH . 
D 4 HOH A 9 310 9 HOH HOH . 
D 4 HOH A 10 311 10 HOH HOH . 
D 4 HOH A 11 312 11 HOH HOH . 
D 4 HOH A 12 313 12 HOH HOH . 
D 4 HOH A 13 314 13 HOH HOH . 
D 4 HOH A 14 315 14 HOH HOH . 
D 4 HOH A 15 316 15 HOH HOH . 
D 4 HOH A 16 317 16 HOH HOH . 
D 4 HOH A 17 318 17 HOH HOH . 
D 4 HOH A 18 319 18 HOH HOH . 
D 4 HOH A 19 320 19 HOH HOH . 
D 4 HOH A 20 321 20 HOH HOH . 
D 4 HOH A 21 322 21 HOH HOH . 
D 4 HOH A 22 323 22 HOH HOH . 
D 4 HOH A 23 324 23 HOH HOH . 
D 4 HOH A 24 325 24 HOH HOH . 
D 4 HOH A 25 326 25 HOH HOH . 
D 4 HOH A 26 327 26 HOH HOH . 
D 4 HOH A 27 328 27 HOH HOH . 
D 4 HOH A 28 329 28 HOH HOH . 
D 4 HOH A 29 330 29 HOH HOH . 
D 4 HOH A 30 331 30 HOH HOH . 
D 4 HOH A 31 332 31 HOH HOH . 
D 4 HOH A 32 333 32 HOH HOH . 
D 4 HOH A 33 334 33 HOH HOH . 
D 4 HOH A 34 335 34 HOH HOH . 
D 4 HOH A 35 336 35 HOH HOH . 
D 4 HOH A 36 337 36 HOH HOH . 
D 4 HOH A 37 338 37 HOH HOH . 
D 4 HOH A 38 339 38 HOH HOH . 
D 4 HOH A 39 340 39 HOH HOH . 
D 4 HOH A 40 341 40 HOH HOH . 
D 4 HOH A 41 342 41 HOH HOH . 
D 4 HOH A 42 343 42 HOH HOH . 
D 4 HOH A 43 344 43 HOH HOH . 
D 4 HOH A 44 345 44 HOH HOH . 
D 4 HOH A 45 346 45 HOH HOH . 
D 4 HOH A 46 347 46 HOH HOH . 
D 4 HOH A 47 348 47 HOH HOH . 
D 4 HOH A 48 349 48 HOH HOH . 
D 4 HOH A 49 350 49 HOH HOH . 
D 4 HOH A 50 351 50 HOH HOH . 
D 4 HOH A 51 352 51 HOH HOH . 
D 4 HOH A 52 353 52 HOH HOH . 
D 4 HOH A 53 354 53 HOH HOH . 
D 4 HOH A 54 355 54 HOH HOH . 
D 4 HOH A 55 356 55 HOH HOH . 
D 4 HOH A 56 357 56 HOH HOH . 
D 4 HOH A 57 358 57 HOH HOH . 
D 4 HOH A 58 359 58 HOH HOH . 
D 4 HOH A 59 360 59 HOH HOH . 
D 4 HOH A 60 361 60 HOH HOH . 
D 4 HOH A 61 362 61 HOH HOH . 
D 4 HOH A 62 363 62 HOH HOH . 
D 4 HOH A 63 364 63 HOH HOH . 
D 4 HOH A 64 365 64 HOH HOH . 
D 4 HOH A 65 366 65 HOH HOH . 
D 4 HOH A 66 367 66 HOH HOH . 
D 4 HOH A 67 368 67 HOH HOH . 
D 4 HOH A 68 369 68 HOH HOH . 
D 4 HOH A 69 370 69 HOH HOH . 
D 4 HOH A 70 371 70 HOH HOH . 
D 4 HOH A 71 372 71 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MPD . . . C 3 10.78 -33.787 -15.784 0.75 33.69 ? C1 MPD 301 A 1 
HETATM 2 C C2 MPD . . . C 3 10.207 -33.602 -14.397 0.75 34.63 ? C2 MPD 301 A 1 
HETATM 3 O O2 MPD . . . C 3 11.267 -33.954 -13.468 0.75 33.92 ? O2 MPD 301 A 1 
HETATM 4 C CM MPD . . . C 3 9.79 -32.146 -14.244 0.75 34.9 ? CM MPD 301 A 1 
HETATM 5 C C3 MPD . . . C 3 9.005 -34.526 -14.193 0.75 36.06 ? C3 MPD 301 A 1 
HETATM 6 C C4 MPD . . . C 3 8.776 -35 -12.765 0.75 36.3 ? C4 MPD 301 A 1 
HETATM 7 O O4 MPD . . . C 3 7.407 -35.304 -12.602 0.75 39.3 ? O4 MPD 301 A 1 
HETATM 8 C C5 MPD . . . C 3 9.555 -36.267 -12.466 0.75 38.3 ? C5 MPD 301 A 1 
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_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           8 
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