data_3EKQ # _model_server_result.job_id Tog9K_0-wzG15-jHNjFDNw _model_server_result.datetime_utc '2024-11-27 20:07:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ekq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":501}' # _entry.id 3EKQ # _exptl.entry_id 3EKQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3EKQ _cell.length_a 51.164 _cell.length_b 59.291 _cell.length_c 61.389 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3EKQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 3EKQ _atom_sites.fract_transf_matrix[1][1] 0.019545 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016866 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01629 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ROC A 1 100 1 ROC QNC . D 3 PO4 A 1 502 502 PO4 PO4 . E 3 PO4 B 1 501 501 PO4 PO4 . F 4 HOH A 1 503 2 HOH WAT . F 4 HOH A 2 504 3 HOH WAT . F 4 HOH A 3 505 4 HOH WAT . F 4 HOH A 4 506 6 HOH WAT . F 4 HOH A 5 507 7 HOH WAT . F 4 HOH A 6 508 8 HOH WAT . F 4 HOH A 7 509 9 HOH WAT . F 4 HOH A 8 510 11 HOH WAT . F 4 HOH A 9 511 15 HOH WAT . F 4 HOH A 10 512 20 HOH WAT . F 4 HOH A 11 513 22 HOH WAT . F 4 HOH A 12 514 23 HOH WAT . F 4 HOH A 13 515 24 HOH WAT . F 4 HOH A 14 516 25 HOH WAT . F 4 HOH A 15 517 26 HOH WAT . F 4 HOH A 16 518 27 HOH WAT . F 4 HOH A 17 519 28 HOH WAT . F 4 HOH A 18 520 29 HOH WAT . F 4 HOH A 19 521 30 HOH WAT . F 4 HOH A 20 522 31 HOH WAT . F 4 HOH A 21 523 32 HOH WAT . F 4 HOH A 22 524 33 HOH WAT . F 4 HOH A 23 525 34 HOH WAT . F 4 HOH A 24 526 35 HOH WAT . F 4 HOH A 25 527 36 HOH WAT . F 4 HOH A 26 528 37 HOH WAT . F 4 HOH A 27 529 39 HOH WAT . F 4 HOH A 28 530 41 HOH WAT . F 4 HOH A 29 531 42 HOH WAT . F 4 HOH A 30 532 51 HOH WAT . F 4 HOH A 31 533 52 HOH WAT . F 4 HOH A 32 534 53 HOH WAT . F 4 HOH A 33 535 54 HOH WAT . F 4 HOH A 34 536 55 HOH WAT . F 4 HOH A 35 537 56 HOH WAT . F 4 HOH A 36 538 71 HOH WAT . F 4 HOH A 37 539 72 HOH WAT . F 4 HOH A 38 540 73 HOH WAT . F 4 HOH A 39 541 74 HOH WAT . F 4 HOH A 40 542 75 HOH WAT . F 4 HOH A 41 543 76 HOH WAT . F 4 HOH A 42 544 77 HOH WAT . F 4 HOH A 43 545 78 HOH WAT . F 4 HOH A 44 546 81 HOH WAT . F 4 HOH A 45 547 83 HOH WAT . F 4 HOH A 46 548 84 HOH WAT . F 4 HOH A 47 549 10 HOH WAT . G 4 HOH B 1 506 5 HOH WAT . G 4 HOH B 2 507 46 HOH WAT . G 4 HOH B 3 508 79 HOH WAT . G 4 HOH B 4 509 80 HOH WAT . G 4 HOH B 5 510 82 HOH WAT . G 4 HOH B 6 511 85 HOH WAT . G 4 HOH B 7 512 1 HOH WAT . G 4 HOH B 8 513 12 HOH WAT . G 4 HOH B 9 514 13 HOH WAT . G 4 HOH B 10 515 14 HOH WAT . G 4 HOH B 11 516 16 HOH WAT . G 4 HOH B 12 517 17 HOH WAT . G 4 HOH B 13 518 18 HOH WAT . G 4 HOH B 14 519 19 HOH WAT . G 4 HOH B 15 520 38 HOH WAT . G 4 HOH B 16 521 58 HOH WAT . G 4 HOH B 17 522 60 HOH WAT . G 4 HOH B 18 523 61 HOH WAT . G 4 HOH B 19 524 62 HOH WAT . G 4 HOH B 20 525 63 HOH WAT . G 4 HOH B 21 526 64 HOH WAT . G 4 HOH B 22 527 65 HOH WAT . G 4 HOH B 23 528 66 HOH WAT . G 4 HOH B 24 529 67 HOH WAT . G 4 HOH B 25 530 68 HOH WAT . G 4 HOH B 26 531 69 HOH WAT . G 4 HOH B 27 532 70 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . E 3 6.215 8.613 21.204 0.5 38.38 ? P PO4 501 B 1 HETATM 2 O O1 PO4 . . . E 3 5.792 10.06 21.17 0.5 39.19 ? O1 PO4 501 B 1 HETATM 3 O O2 PO4 . . . E 3 6.378 8.137 19.79 0.5 38.04 ? O2 PO4 501 B 1 HETATM 4 O O3 PO4 . . . E 3 5.197 7.759 21.919 0.5 39.29 ? O3 PO4 501 B 1 HETATM 5 O O4 PO4 . . . E 3 7.541 8.488 21.917 0.5 41.13 ? O4 PO4 501 B 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #