data_3EKU
#
_model_server_result.job_id            pZ5R8_tx8ge5C2FJGUOrXg 
_model_server_result.datetime_utc      '2024-10-13 02:24:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3eku 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":901}' 
#
_entry.id    3EKU 
#
_exptl.entry_id    3EKU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          98.96 
_cell.angle_gamma         90 
_cell.entry_id            3EKU 
_cell.length_a            207.4 
_cell.length_b            54.04 
_cell.length_c            36.89 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3EKU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 GLN 263 A GLN 263 1_555 D CA CA . A CA 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.529 ? 
metalc ? metalc2 A OG SER 265 A SER 265 1_555 D CA CA . A CA 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? 
metalc ? metalc3 B O2G ATP . A ATP 800 1_555 C CA CA . A CA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? 
metalc ? metalc4 B O1B ATP . A ATP 800 1_555 C CA CA . A CA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? 
metalc ? metalc5 C CA CA . A CA 901 1_555 F O HOH . A HOH 918 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? 
metalc ? metalc6 C CA CA . A CA 901 1_555 F O HOH . A HOH 949 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.816 ? 
metalc ? metalc7 C CA CA . A CA 901 1_555 F O HOH . A HOH 954 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.428 ? 
metalc ? metalc8 C CA CA . A CA 901 1_555 F O HOH . A HOH 972 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? 
metalc ? metalc9 C CA CA . A CA 901 1_555 F O HOH . A HOH 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.519 ? 
metalc ? metalc10 D CA CA . A CA 902 1_555 F O HOH . A HOH 945 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3EKU 
_atom_sites.fract_transf_matrix[1][1]    0.004822 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00076 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018505 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.027442 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ATP A 1 800 800 ATP ATP . 
C 3 CA A 1 901 901 CA CA . 
D 3 CA A 1 902 902 CA CA . 
E 4 CY9 A 1 903 1 CY9 CY9 . 
F 5 HOH A 1 904 1 HOH WAT . 
F 5 HOH A 2 905 2 HOH WAT . 
F 5 HOH A 3 906 3 HOH WAT . 
F 5 HOH A 4 907 4 HOH WAT . 
F 5 HOH A 5 908 5 HOH WAT . 
F 5 HOH A 6 909 6 HOH WAT . 
F 5 HOH A 7 910 7 HOH WAT . 
F 5 HOH A 8 911 8 HOH WAT . 
F 5 HOH A 9 912 9 HOH WAT . 
F 5 HOH A 10 913 10 HOH WAT . 
F 5 HOH A 11 914 11 HOH WAT . 
F 5 HOH A 12 915 12 HOH WAT . 
F 5 HOH A 13 916 13 HOH WAT . 
F 5 HOH A 14 917 14 HOH WAT . 
F 5 HOH A 15 918 15 HOH WAT . 
F 5 HOH A 16 919 16 HOH WAT . 
F 5 HOH A 17 920 17 HOH WAT . 
F 5 HOH A 18 921 18 HOH WAT . 
F 5 HOH A 19 922 19 HOH WAT . 
F 5 HOH A 20 923 20 HOH WAT . 
F 5 HOH A 21 924 21 HOH WAT . 
F 5 HOH A 22 925 22 HOH WAT . 
F 5 HOH A 23 926 23 HOH WAT . 
F 5 HOH A 24 927 24 HOH WAT . 
F 5 HOH A 25 928 25 HOH WAT . 
F 5 HOH A 26 929 26 HOH WAT . 
F 5 HOH A 27 930 27 HOH WAT . 
F 5 HOH A 28 931 28 HOH WAT . 
F 5 HOH A 29 932 29 HOH WAT . 
F 5 HOH A 30 933 30 HOH WAT . 
F 5 HOH A 31 934 31 HOH WAT . 
F 5 HOH A 32 935 32 HOH WAT . 
F 5 HOH A 33 936 33 HOH WAT . 
F 5 HOH A 34 937 34 HOH WAT . 
F 5 HOH A 35 938 35 HOH WAT . 
F 5 HOH A 36 939 36 HOH WAT . 
F 5 HOH A 37 940 37 HOH WAT . 
F 5 HOH A 38 941 38 HOH WAT . 
F 5 HOH A 39 942 39 HOH WAT . 
F 5 HOH A 40 943 40 HOH WAT . 
F 5 HOH A 41 944 41 HOH WAT . 
F 5 HOH A 42 945 42 HOH WAT . 
F 5 HOH A 43 946 43 HOH WAT . 
F 5 HOH A 44 947 44 HOH WAT . 
F 5 HOH A 45 948 45 HOH WAT . 
F 5 HOH A 46 949 46 HOH WAT . 
F 5 HOH A 47 950 47 HOH WAT . 
F 5 HOH A 48 951 48 HOH WAT . 
F 5 HOH A 49 952 49 HOH WAT . 
F 5 HOH A 50 953 50 HOH WAT . 
F 5 HOH A 51 954 51 HOH WAT . 
F 5 HOH A 52 955 52 HOH WAT . 
F 5 HOH A 53 956 53 HOH WAT . 
F 5 HOH A 54 957 54 HOH WAT . 
F 5 HOH A 55 958 55 HOH WAT . 
F 5 HOH A 56 959 56 HOH WAT . 
F 5 HOH A 57 960 57 HOH WAT . 
F 5 HOH A 58 961 58 HOH WAT . 
F 5 HOH A 59 962 59 HOH WAT . 
F 5 HOH A 60 963 60 HOH WAT . 
F 5 HOH A 61 964 61 HOH WAT . 
F 5 HOH A 62 965 62 HOH WAT . 
F 5 HOH A 63 966 63 HOH WAT . 
F 5 HOH A 64 967 64 HOH WAT . 
F 5 HOH A 65 968 65 HOH WAT . 
F 5 HOH A 66 969 66 HOH WAT . 
F 5 HOH A 67 970 67 HOH WAT . 
F 5 HOH A 68 971 68 HOH WAT . 
F 5 HOH A 69 972 69 HOH WAT . 
F 5 HOH A 70 973 70 HOH WAT . 
F 5 HOH A 71 974 71 HOH WAT . 
F 5 HOH A 72 975 72 HOH WAT . 
F 5 HOH A 73 976 73 HOH WAT . 
F 5 HOH A 74 977 74 HOH WAT . 
F 5 HOH A 75 978 75 HOH WAT . 
F 5 HOH A 76 979 76 HOH WAT . 
F 5 HOH A 77 980 77 HOH WAT . 
F 5 HOH A 78 981 78 HOH WAT . 
F 5 HOH A 79 982 79 HOH WAT . 
F 5 HOH A 80 983 80 HOH WAT . 
F 5 HOH A 81 984 81 HOH WAT . 
F 5 HOH A 82 985 82 HOH WAT . 
F 5 HOH A 83 986 83 HOH WAT . 
F 5 HOH A 84 987 84 HOH WAT . 
F 5 HOH A 85 988 85 HOH WAT . 
F 5 HOH A 86 989 86 HOH WAT . 
F 5 HOH A 87 990 87 HOH WAT . 
F 5 HOH A 88 991 88 HOH WAT . 
F 5 HOH A 89 992 89 HOH WAT . 
F 5 HOH A 90 993 90 HOH WAT . 
F 5 HOH A 91 994 91 HOH WAT . 
F 5 HOH A 92 995 92 HOH WAT . 
F 5 HOH A 93 996 93 HOH WAT . 
F 5 HOH A 94 997 94 HOH WAT . 
F 5 HOH A 95 998 95 HOH WAT . 
F 5 HOH A 96 999 96 HOH WAT . 
F 5 HOH A 97 1000 97 HOH WAT . 
F 5 HOH A 98 1001 98 HOH WAT . 
F 5 HOH A 99 1002 99 HOH WAT . 
F 5 HOH A 100 1003 100 HOH WAT . 
F 5 HOH A 101 1004 101 HOH WAT . 
F 5 HOH A 102 1005 102 HOH WAT . 
F 5 HOH A 103 1006 103 HOH WAT . 
F 5 HOH A 104 1007 104 HOH WAT . 
F 5 HOH A 105 1008 105 HOH WAT . 
F 5 HOH A 106 1009 106 HOH WAT . 
F 5 HOH A 107 1010 107 HOH WAT . 
F 5 HOH A 108 1011 108 HOH WAT . 
F 5 HOH A 109 1012 109 HOH WAT . 
F 5 HOH A 110 1013 110 HOH WAT . 
F 5 HOH A 111 1014 111 HOH WAT . 
F 5 HOH A 112 1015 112 HOH WAT . 
F 5 HOH A 113 1016 113 HOH WAT . 
F 5 HOH A 114 1017 114 HOH WAT . 
F 5 HOH A 115 1018 115 HOH WAT . 
F 5 HOH A 116 1019 116 HOH WAT . 
F 5 HOH A 117 1020 117 HOH WAT . 
F 5 HOH A 118 1021 118 HOH HOH . 
F 5 HOH A 119 1022 119 HOH HOH . 
F 5 HOH A 120 1023 120 HOH HOH . 
F 5 HOH A 121 1024 121 HOH HOH . 
F 5 HOH A 122 1025 122 HOH HOH . 
F 5 HOH A 123 1026 123 HOH HOH . 
F 5 HOH A 124 1027 124 HOH HOH . 
F 5 HOH A 125 1028 125 HOH HOH . 
F 5 HOH A 126 1029 126 HOH HOH . 
F 5 HOH A 127 1030 127 HOH HOH . 
F 5 HOH A 128 1031 128 HOH HOH . 
F 5 HOH A 129 1032 129 HOH HOH . 
F 5 HOH A 130 1033 130 HOH HOH . 
F 5 HOH A 131 1034 131 HOH HOH . 
F 5 HOH A 132 1035 132 HOH HOH . 
F 5 HOH A 133 1036 133 HOH HOH . 
F 5 HOH A 134 1037 134 HOH HOH . 
F 5 HOH A 135 1038 135 HOH HOH . 
F 5 HOH A 136 1039 136 HOH HOH . 
F 5 HOH A 137 1040 137 HOH HOH . 
F 5 HOH A 138 1041 138 HOH HOH . 
F 5 HOH A 139 1042 139 HOH HOH . 
F 5 HOH A 140 1043 140 HOH HOH . 
F 5 HOH A 141 1044 141 HOH HOH . 
F 5 HOH A 142 1045 142 HOH HOH . 
F 5 HOH A 143 1046 143 HOH HOH . 
F 5 HOH A 144 1047 144 HOH HOH . 
F 5 HOH A 145 1048 145 HOH HOH . 
F 5 HOH A 146 1049 146 HOH HOH . 
F 5 HOH A 147 1050 147 HOH HOH . 
F 5 HOH A 148 1051 148 HOH HOH . 
F 5 HOH A 149 1052 149 HOH HOH . 
F 5 HOH A 150 1053 150 HOH HOH . 
F 5 HOH A 151 1054 151 HOH HOH . 
F 5 HOH A 152 1055 152 HOH HOH . 
F 5 HOH A 153 1056 153 HOH HOH . 
F 5 HOH A 154 1057 154 HOH HOH . 
F 5 HOH A 155 1058 155 HOH HOH . 
F 5 HOH A 156 1059 156 HOH HOH . 
F 5 HOH A 157 1060 157 HOH HOH . 
F 5 HOH A 158 1061 158 HOH HOH . 
F 5 HOH A 159 1062 159 HOH HOH . 
F 5 HOH A 160 1063 160 HOH HOH . 
F 5 HOH A 161 1064 161 HOH HOH . 
F 5 HOH A 162 1065 162 HOH HOH . 
F 5 HOH A 163 1066 163 HOH HOH . 
F 5 HOH A 164 1067 164 HOH HOH . 
F 5 HOH A 165 1068 165 HOH HOH . 
F 5 HOH A 166 1069 166 HOH HOH . 
F 5 HOH A 167 1070 167 HOH HOH . 
F 5 HOH A 168 1071 168 HOH HOH . 
F 5 HOH A 169 1072 169 HOH HOH . 
F 5 HOH A 170 1073 170 HOH HOH . 
F 5 HOH A 171 1074 171 HOH HOH . 
F 5 HOH A 172 1075 172 HOH HOH . 
F 5 HOH A 173 1076 173 HOH HOH . 
F 5 HOH A 174 1077 174 HOH HOH . 
F 5 HOH A 175 1078 175 HOH HOH . 
F 5 HOH A 176 1079 176 HOH HOH . 
F 5 HOH A 177 1080 177 HOH HOH . 
F 5 HOH A 178 1081 178 HOH HOH . 
F 5 HOH A 179 1082 179 HOH HOH . 
F 5 HOH A 180 1083 180 HOH HOH . 
F 5 HOH A 181 1084 181 HOH HOH . 
F 5 HOH A 182 1085 182 HOH HOH . 
F 5 HOH A 183 1086 183 HOH HOH . 
F 5 HOH A 184 1087 184 HOH HOH . 
F 5 HOH A 185 1088 185 HOH HOH . 
F 5 HOH A 186 1089 186 HOH HOH . 
F 5 HOH A 187 1090 187 HOH HOH . 
F 5 HOH A 188 1091 188 HOH HOH . 
F 5 HOH A 189 1092 189 HOH HOH . 
F 5 HOH A 190 1093 190 HOH HOH . 
F 5 HOH A 191 1094 191 HOH HOH . 
F 5 HOH A 192 1095 192 HOH HOH . 
F 5 HOH A 193 1096 193 HOH HOH . 
F 5 HOH A 194 1097 194 HOH HOH . 
F 5 HOH A 195 1098 195 HOH HOH . 
F 5 HOH A 196 1099 196 HOH HOH . 
F 5 HOH A 197 1100 197 HOH HOH . 
F 5 HOH A 198 1101 198 HOH HOH . 
F 5 HOH A 199 1102 199 HOH HOH . 
F 5 HOH A 200 1103 200 HOH HOH . 
F 5 HOH A 201 1104 201 HOH HOH . 
F 5 HOH A 202 1105 202 HOH HOH . 
F 5 HOH A 203 1106 203 HOH HOH . 
F 5 HOH A 204 1107 204 HOH HOH . 
F 5 HOH A 205 1108 205 HOH HOH . 
F 5 HOH A 206 1109 206 HOH HOH . 
F 5 HOH A 207 1110 207 HOH HOH . 
F 5 HOH A 208 1111 208 HOH HOH . 
F 5 HOH A 209 1112 209 HOH HOH . 
F 5 HOH A 210 1113 210 HOH HOH . 
F 5 HOH A 211 1114 211 HOH HOH . 
F 5 HOH A 212 1115 212 HOH HOH . 
F 5 HOH A 213 1116 213 HOH HOH . 
F 5 HOH A 214 1117 214 HOH HOH . 
F 5 HOH A 215 1118 215 HOH HOH . 
F 5 HOH A 216 1119 216 HOH HOH . 
F 5 HOH A 217 1120 217 HOH HOH . 
F 5 HOH A 218 1121 218 HOH HOH . 
F 5 HOH A 219 1122 219 HOH HOH . 
F 5 HOH A 220 1123 220 HOH HOH . 
F 5 HOH A 221 1124 221 HOH HOH . 
F 5 HOH A 222 1125 222 HOH HOH . 
F 5 HOH A 223 1126 223 HOH HOH . 
F 5 HOH A 224 1127 224 HOH HOH . 
F 5 HOH A 225 1128 225 HOH HOH . 
F 5 HOH A 226 1129 226 HOH HOH . 
F 5 HOH A 227 1130 227 HOH HOH . 
F 5 HOH A 228 1131 228 HOH HOH . 
F 5 HOH A 229 1132 229 HOH HOH . 
F 5 HOH A 230 1133 230 HOH HOH . 
F 5 HOH A 231 1134 231 HOH HOH . 
F 5 HOH A 232 1135 232 HOH HOH . 
F 5 HOH A 233 1136 233 HOH HOH . 
F 5 HOH A 234 1137 234 HOH HOH . 
F 5 HOH A 235 1138 235 HOH HOH . 
F 5 HOH A 236 1139 236 HOH HOH . 
F 5 HOH A 237 1140 237 HOH HOH . 
F 5 HOH A 238 1141 238 HOH HOH . 
F 5 HOH A 239 1142 239 HOH HOH . 
F 5 HOH A 240 1143 240 HOH HOH . 
F 5 HOH A 241 1144 241 HOH HOH . 
F 5 HOH A 242 1145 242 HOH HOH . 
F 5 HOH A 243 1146 243 HOH HOH . 
F 5 HOH A 244 1147 244 HOH HOH . 
F 5 HOH A 245 1148 245 HOH HOH . 
F 5 HOH A 246 1149 246 HOH HOH . 
F 5 HOH A 247 1150 247 HOH HOH . 
F 5 HOH A 248 1151 248 HOH HOH . 
F 5 HOH A 249 1152 249 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               68.645 
_atom_site.Cartn_y               -1.192 
_atom_site.Cartn_z               28.661 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        18.58 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           901 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           277 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           1 
#