data_3EKV # _model_server_result.job_id GJ5zEsFAGynEZAPe_gR0qQ _model_server_result.datetime_utc '2024-11-27 19:03:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ekv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":504}' # _entry.id 3EKV # _exptl.entry_id 3EKV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3EKV _cell.length_a 50.723 _cell.length_b 57.401 _cell.length_c 61.741 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3EKV _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 73 n n C OXT ACT sing 74 n n C CH3 ACT sing 75 n n CH3 H1 ACT sing 76 n n CH3 H2 ACT sing 77 n n CH3 H3 ACT sing 78 n n # _atom_sites.entry_id 3EKV _atom_sites.fract_transf_matrix[1][1] 0.019715 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017421 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016197 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 478 A 1 200 200 478 478 . D 3 ACT A 1 501 501 ACT ACT . E 3 ACT A 1 502 502 ACT ACT . F 3 ACT A 1 503 503 ACT ACT . G 3 ACT A 1 504 504 ACT ACT . H 4 HOH A 1 103 36 HOH WAT . H 4 HOH A 2 104 37 HOH WAT . H 4 HOH A 3 107 40 HOH WAT . H 4 HOH A 4 108 41 HOH WAT . H 4 HOH A 5 109 42 HOH WAT . H 4 HOH A 6 112 58 HOH WAT . H 4 HOH A 7 114 60 HOH WAT . H 4 HOH A 8 118 64 HOH WAT . H 4 HOH A 9 122 68 HOH WAT . H 4 HOH A 10 125 79 HOH WAT . H 4 HOH A 11 129 83 HOH WAT . H 4 HOH A 12 130 84 HOH WAT . H 4 HOH A 13 131 85 HOH WAT . H 4 HOH A 14 147 116 HOH WAT . H 4 HOH A 15 505 1 HOH WAT . H 4 HOH A 16 507 3 HOH WAT . H 4 HOH A 17 509 5 HOH WAT . H 4 HOH A 18 510 6 HOH WAT . H 4 HOH A 19 511 7 HOH WAT . H 4 HOH A 20 512 8 HOH WAT . H 4 HOH A 21 515 11 HOH WAT . H 4 HOH A 22 516 12 HOH WAT . H 4 HOH A 23 517 13 HOH WAT . H 4 HOH A 24 519 15 HOH WAT . H 4 HOH A 25 520 16 HOH WAT . H 4 HOH A 26 521 17 HOH WAT . H 4 HOH A 27 523 19 HOH WAT . H 4 HOH A 28 524 20 HOH WAT . H 4 HOH A 29 525 21 HOH WAT . H 4 HOH A 30 526 22 HOH WAT . H 4 HOH A 31 529 25 HOH WAT . H 4 HOH A 32 530 26 HOH WAT . H 4 HOH A 33 531 27 HOH WAT . H 4 HOH A 34 534 30 HOH WAT . H 4 HOH A 35 537 44 HOH WAT . H 4 HOH A 36 538 45 HOH WAT . H 4 HOH A 37 543 50 HOH WAT . H 4 HOH A 38 545 52 HOH WAT . H 4 HOH A 39 546 53 HOH WAT . H 4 HOH A 40 548 55 HOH WAT . H 4 HOH A 41 550 69 HOH WAT . H 4 HOH A 42 552 71 HOH WAT . H 4 HOH A 43 553 72 HOH WAT . H 4 HOH A 44 554 73 HOH WAT . H 4 HOH A 45 556 75 HOH WAT . H 4 HOH A 46 558 86 HOH WAT . H 4 HOH A 47 559 87 HOH WAT . H 4 HOH A 48 566 102 HOH WAT . H 4 HOH A 49 567 103 HOH WAT . H 4 HOH A 50 568 104 HOH WAT . H 4 HOH A 51 569 105 HOH WAT . H 4 HOH A 52 570 106 HOH WAT . H 4 HOH A 53 571 107 HOH WAT . H 4 HOH A 54 572 108 HOH WAT . H 4 HOH A 55 573 118 HOH WAT . H 4 HOH A 56 574 119 HOH WAT . H 4 HOH A 57 575 120 HOH WAT . H 4 HOH A 58 576 121 HOH WAT . H 4 HOH A 59 577 122 HOH WAT . H 4 HOH A 60 578 123 HOH WAT . H 4 HOH A 61 579 124 HOH WAT . I 4 HOH B 1 100 33 HOH WAT . I 4 HOH B 2 101 34 HOH WAT . I 4 HOH B 3 102 35 HOH WAT . I 4 HOH B 4 105 38 HOH WAT . I 4 HOH B 5 106 39 HOH WAT . I 4 HOH B 6 110 43 HOH WAT . I 4 HOH B 7 111 57 HOH WAT . I 4 HOH B 8 113 59 HOH WAT . I 4 HOH B 9 115 61 HOH WAT . I 4 HOH B 10 116 62 HOH WAT . I 4 HOH B 11 117 63 HOH WAT . I 4 HOH B 12 119 65 HOH WAT . I 4 HOH B 13 120 66 HOH WAT . I 4 HOH B 14 121 67 HOH WAT . I 4 HOH B 15 123 77 HOH WAT . I 4 HOH B 16 124 78 HOH WAT . I 4 HOH B 17 126 80 HOH WAT . I 4 HOH B 18 127 81 HOH WAT . I 4 HOH B 19 128 82 HOH WAT . I 4 HOH B 20 132 94 HOH WAT . I 4 HOH B 21 133 95 HOH WAT . I 4 HOH B 22 134 96 HOH WAT . I 4 HOH B 23 135 97 HOH WAT . I 4 HOH B 24 136 98 HOH WAT . I 4 HOH B 25 137 99 HOH WAT . I 4 HOH B 26 138 100 HOH WAT . I 4 HOH B 27 139 101 HOH WAT . I 4 HOH B 28 140 109 HOH WAT . I 4 HOH B 29 141 110 HOH WAT . I 4 HOH B 30 142 111 HOH WAT . I 4 HOH B 31 143 112 HOH WAT . I 4 HOH B 32 144 113 HOH WAT . I 4 HOH B 33 145 114 HOH WAT . I 4 HOH B 34 146 115 HOH WAT . I 4 HOH B 35 148 117 HOH WAT . I 4 HOH B 36 506 2 HOH WAT . I 4 HOH B 37 508 4 HOH WAT . I 4 HOH B 38 513 9 HOH WAT . I 4 HOH B 39 514 10 HOH WAT . I 4 HOH B 40 518 14 HOH WAT . I 4 HOH B 41 522 18 HOH WAT . I 4 HOH B 42 527 23 HOH WAT . I 4 HOH B 43 528 24 HOH WAT . I 4 HOH B 44 532 28 HOH WAT . I 4 HOH B 45 533 29 HOH WAT . I 4 HOH B 46 535 31 HOH WAT . I 4 HOH B 47 536 32 HOH WAT . I 4 HOH B 48 539 46 HOH WAT . I 4 HOH B 49 540 47 HOH WAT . I 4 HOH B 50 541 48 HOH WAT . I 4 HOH B 51 542 49 HOH WAT . I 4 HOH B 52 544 51 HOH WAT . I 4 HOH B 53 547 54 HOH WAT . I 4 HOH B 54 549 56 HOH WAT . I 4 HOH B 55 551 70 HOH WAT . I 4 HOH B 56 555 74 HOH WAT . I 4 HOH B 57 557 76 HOH WAT . I 4 HOH B 58 560 88 HOH WAT . I 4 HOH B 59 561 89 HOH WAT . I 4 HOH B 60 562 90 HOH WAT . I 4 HOH B 61 563 91 HOH WAT . I 4 HOH B 62 564 92 HOH WAT . I 4 HOH B 63 565 93 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . G 3 37.874 17.086 28.888 1 40.36 ? C ACT 504 A 1 HETATM 2 O O ACT . . . G 3 38.192 18.265 28.639 1 40.41 ? O ACT 504 A 1 HETATM 3 O OXT ACT . . . G 3 38.83 16.287 28.917 1 41.25 ? OXT ACT 504 A 1 HETATM 4 C CH3 ACT . . . G 3 36.462 16.659 29.139 1 40.64 ? CH3 ACT 504 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #