data_3ELH # _model_server_result.job_id lGR7HXPNSjbj0YnxYzzXXw _model_server_result.datetime_utc '2024-10-25 20:26:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3elh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":166}' # _entry.id 3ELH # _exptl.entry_id 3ELH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3ELH _cell.length_a 80.717 _cell.length_b 153.576 _cell.length_c 185.795 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ELH _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? hexameric 6 author_defined_assembly 1 ? hexameric 6 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,G,H,K,L,O,P,S,U,W 1 1,2 B,D,F,I,J,M,N,Q,R,T,V,X 2 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 3_755 -x+2,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 161.434 0 92.8975 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 J N N ? 3 L N N ? 3 N N N ? 3 P N N ? 3 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 G O3B DUD . A DUD 160 1_555 H MG MG . A MG 161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc2 I O3B DUD . B DUD 161 1_555 J MG MG . B MG 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? metalc ? metalc3 K O3B DUD . C DUD 162 1_555 L MG MG . C MG 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc4 M O1A DUD . D DUD 163 1_555 N MG MG . D MG 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? metalc ? metalc5 O O1A DUD . E DUD 164 1_555 P MG MG . E MG 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? metalc ? metalc6 O O3B DUD . E DUD 164 1_555 P MG MG . E MG 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc7 Q O3B DUD . F DUD 165 1_555 R MG MG . F MG 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3ELH _atom_sites.fract_transf_matrix[1][1] 0.012389 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006511 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005382 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 DUD A 1 160 160 DUD DUD . H 3 MG A 1 161 160 MG MG . I 2 DUD B 1 161 161 DUD DUD . J 3 MG B 1 162 161 MG MG . K 2 DUD C 1 162 162 DUD DUD . L 3 MG C 1 163 162 MG MG . M 2 DUD D 1 163 163 DUD DUD . N 3 MG D 1 164 163 MG MG . O 2 DUD E 1 164 164 DUD DUD . P 3 MG E 1 165 164 MG MG . Q 2 DUD F 1 165 165 DUD DUD . R 3 MG F 1 166 165 MG MG . S 4 HOH A 1 162 3 HOH HOH . S 4 HOH A 2 163 5 HOH HOH . S 4 HOH A 3 164 7 HOH HOH . S 4 HOH A 4 165 15 HOH HOH . S 4 HOH A 5 166 25 HOH HOH . S 4 HOH A 6 167 28 HOH HOH . S 4 HOH A 7 168 29 HOH HOH . S 4 HOH A 8 169 32 HOH HOH . S 4 HOH A 9 170 33 HOH HOH . S 4 HOH A 10 171 36 HOH HOH . S 4 HOH A 11 172 39 HOH HOH . S 4 HOH A 12 173 60 HOH HOH . S 4 HOH A 13 174 61 HOH HOH . S 4 HOH A 14 175 86 HOH HOH . S 4 HOH A 15 176 97 HOH HOH . S 4 HOH A 16 177 102 HOH HOH . S 4 HOH A 17 178 104 HOH HOH . S 4 HOH A 18 179 118 HOH HOH . S 4 HOH A 19 180 120 HOH HOH . S 4 HOH A 20 181 121 HOH HOH . S 4 HOH A 21 182 133 HOH HOH . S 4 HOH A 22 183 134 HOH HOH . S 4 HOH A 23 184 135 HOH HOH . S 4 HOH A 24 185 152 HOH HOH . S 4 HOH A 25 186 155 HOH HOH . T 4 HOH B 1 163 30 HOH HOH . T 4 HOH B 2 164 34 HOH HOH . T 4 HOH B 3 165 42 HOH HOH . T 4 HOH B 4 166 44 HOH HOH . T 4 HOH B 5 167 45 HOH HOH . T 4 HOH B 6 168 47 HOH HOH . T 4 HOH B 7 169 65 HOH HOH . T 4 HOH B 8 170 68 HOH HOH . T 4 HOH B 9 171 76 HOH HOH . T 4 HOH B 10 172 87 HOH HOH . T 4 HOH B 11 173 92 HOH HOH . T 4 HOH B 12 174 96 HOH HOH . T 4 HOH B 13 175 99 HOH HOH . T 4 HOH B 14 176 105 HOH HOH . T 4 HOH B 15 177 125 HOH HOH . T 4 HOH B 16 178 132 HOH HOH . T 4 HOH B 17 179 141 HOH HOH . T 4 HOH B 18 180 147 HOH HOH . T 4 HOH B 19 181 153 HOH HOH . U 4 HOH C 1 164 4 HOH HOH . U 4 HOH C 2 165 6 HOH HOH . U 4 HOH C 3 166 8 HOH HOH . U 4 HOH C 4 167 9 HOH HOH . U 4 HOH C 5 168 10 HOH HOH . U 4 HOH C 6 169 11 HOH HOH . U 4 HOH C 7 170 12 HOH HOH . U 4 HOH C 8 171 14 HOH HOH . U 4 HOH C 9 172 18 HOH HOH . U 4 HOH C 10 173 22 HOH HOH . U 4 HOH C 11 174 23 HOH HOH . U 4 HOH C 12 175 26 HOH HOH . U 4 HOH C 13 176 27 HOH HOH . U 4 HOH C 14 177 31 HOH HOH . U 4 HOH C 15 178 48 HOH HOH . U 4 HOH C 16 179 49 HOH HOH . U 4 HOH C 17 180 51 HOH HOH . U 4 HOH C 18 181 54 HOH HOH . U 4 HOH C 19 182 58 HOH HOH . U 4 HOH C 20 183 64 HOH HOH . U 4 HOH C 21 184 74 HOH HOH . U 4 HOH C 22 185 78 HOH HOH . U 4 HOH C 23 186 88 HOH HOH . U 4 HOH C 24 187 95 HOH HOH . U 4 HOH C 25 188 106 HOH HOH . U 4 HOH C 26 189 107 HOH HOH . U 4 HOH C 27 190 108 HOH HOH . U 4 HOH C 28 191 109 HOH HOH . U 4 HOH C 29 192 110 HOH HOH . U 4 HOH C 30 193 112 HOH HOH . U 4 HOH C 31 194 113 HOH HOH . U 4 HOH C 32 195 119 HOH HOH . U 4 HOH C 33 196 123 HOH HOH . U 4 HOH C 34 197 126 HOH HOH . U 4 HOH C 35 198 128 HOH HOH . U 4 HOH C 36 199 136 HOH HOH . U 4 HOH C 37 200 137 HOH HOH . U 4 HOH C 38 201 151 HOH HOH . V 4 HOH D 1 165 17 HOH HOH . V 4 HOH D 2 166 20 HOH HOH . V 4 HOH D 3 167 35 HOH HOH . V 4 HOH D 4 168 40 HOH HOH . V 4 HOH D 5 169 46 HOH HOH . V 4 HOH D 6 170 55 HOH HOH . V 4 HOH D 7 171 57 HOH HOH . V 4 HOH D 8 172 59 HOH HOH . V 4 HOH D 9 173 62 HOH HOH . V 4 HOH D 10 174 63 HOH HOH . V 4 HOH D 11 175 66 HOH HOH . V 4 HOH D 12 176 69 HOH HOH . V 4 HOH D 13 177 80 HOH HOH . V 4 HOH D 14 178 81 HOH HOH . V 4 HOH D 15 179 89 HOH HOH . V 4 HOH D 16 180 90 HOH HOH . V 4 HOH D 17 181 91 HOH HOH . V 4 HOH D 18 182 103 HOH HOH . V 4 HOH D 19 183 115 HOH HOH . V 4 HOH D 20 184 116 HOH HOH . V 4 HOH D 21 185 127 HOH HOH . V 4 HOH D 22 186 129 HOH HOH . V 4 HOH D 23 187 130 HOH HOH . V 4 HOH D 24 188 138 HOH HOH . V 4 HOH D 25 189 139 HOH HOH . V 4 HOH D 26 190 140 HOH HOH . V 4 HOH D 27 191 142 HOH HOH . V 4 HOH D 28 192 146 HOH HOH . W 4 HOH E 1 166 1 HOH HOH . W 4 HOH E 2 167 16 HOH HOH . W 4 HOH E 3 168 21 HOH HOH . W 4 HOH E 4 169 38 HOH HOH . W 4 HOH E 5 170 41 HOH HOH . W 4 HOH E 6 171 50 HOH HOH . W 4 HOH E 7 172 52 HOH HOH . W 4 HOH E 8 173 53 HOH HOH . W 4 HOH E 9 174 56 HOH HOH . W 4 HOH E 10 175 73 HOH HOH . W 4 HOH E 11 176 75 HOH HOH . W 4 HOH E 12 177 77 HOH HOH . W 4 HOH E 13 178 79 HOH HOH . W 4 HOH E 14 179 82 HOH HOH . W 4 HOH E 15 180 84 HOH HOH . W 4 HOH E 16 181 85 HOH HOH . W 4 HOH E 17 182 93 HOH HOH . W 4 HOH E 18 183 100 HOH HOH . W 4 HOH E 19 184 101 HOH HOH . W 4 HOH E 20 185 111 HOH HOH . W 4 HOH E 21 186 131 HOH HOH . W 4 HOH E 22 187 149 HOH HOH . X 4 HOH F 1 167 2 HOH HOH . X 4 HOH F 2 168 13 HOH HOH . X 4 HOH F 3 169 19 HOH HOH . X 4 HOH F 4 170 24 HOH HOH . X 4 HOH F 5 171 37 HOH HOH . X 4 HOH F 6 172 43 HOH HOH . X 4 HOH F 7 173 67 HOH HOH . X 4 HOH F 8 174 70 HOH HOH . X 4 HOH F 9 175 71 HOH HOH . X 4 HOH F 10 176 72 HOH HOH . X 4 HOH F 11 177 83 HOH HOH . X 4 HOH F 12 178 94 HOH HOH . X 4 HOH F 13 179 98 HOH HOH . X 4 HOH F 14 180 114 HOH HOH . X 4 HOH F 15 181 117 HOH HOH . X 4 HOH F 16 182 122 HOH HOH . X 4 HOH F 17 183 124 HOH HOH . X 4 HOH F 18 184 150 HOH HOH . X 4 HOH F 19 185 154 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id R _atom_site.label_entity_id 3 _atom_site.Cartn_x 50.958 _atom_site.Cartn_y 44.392 _atom_site.Cartn_z 47.288 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 64.8 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 166 _atom_site.auth_asym_id F _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #