data_3EM0
#
_model_server_result.job_id            OTgSs-eqSO8tqit_EQ65MQ 
_model_server_result.datetime_utc      '2024-11-13 19:55:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3em0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":500}' 
#
_entry.id    3EM0 
#
_exptl.entry_id    3EM0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              408.571 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHOLIC ACID' 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          127.65 
_cell.angle_gamma         90 
_cell.entry_id            3EM0 
_cell.length_a            96.285 
_cell.length_b            85.285 
_cell.length_c            75.055 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3EM0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,L 1 1 
B,G,H,I,J,K,M 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
#
_chem_comp.formula           'C24 H40 O5' 
_chem_comp.formula_weight    408.571 
_chem_comp.id                CHD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHOLIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 CHD sing 70 n n 
C1 C10 CHD sing 71 n n 
C1 H11 CHD sing 72 n n 
C1 H12A CHD sing 73 n n 
C2 C3 CHD sing 74 n n 
C2 H21 CHD sing 75 n n 
C2 H22 CHD sing 76 n n 
C3 O3 CHD sing 77 n n 
C3 C4 CHD sing 78 n n 
C3 H3 CHD sing 79 n n 
O3 HO3 CHD sing 80 n n 
C4 C5 CHD sing 81 n n 
C4 H41 CHD sing 82 n n 
C4 H42 CHD sing 83 n n 
C5 C6 CHD sing 84 n n 
C5 C10 CHD sing 85 n n 
C5 H5 CHD sing 86 n n 
C6 C7 CHD sing 87 n n 
C6 H61 CHD sing 88 n n 
C6 H62 CHD sing 89 n n 
C7 O7 CHD sing 90 n n 
C7 C8 CHD sing 91 n n 
C7 H7 CHD sing 92 n n 
O7 HO7 CHD sing 93 n n 
C8 C9 CHD sing 94 n n 
C8 C14 CHD sing 95 n n 
C8 H8 CHD sing 96 n n 
C9 C10 CHD sing 97 n n 
C9 C11 CHD sing 98 n n 
C9 H9 CHD sing 99 n n 
C10 C19 CHD sing 100 n n 
C11 C12 CHD sing 101 n n 
C11 H111 CHD sing 102 n n 
C11 H112 CHD sing 103 n n 
C12 O12 CHD sing 104 n n 
C12 C13 CHD sing 105 n n 
C12 H12 CHD sing 106 n n 
O12 HO12 CHD sing 107 n n 
C13 C14 CHD sing 108 n n 
C13 C17 CHD sing 109 n n 
C13 C18 CHD sing 110 n n 
C14 C15 CHD sing 111 n n 
C14 H14 CHD sing 112 n n 
C15 C16 CHD sing 113 n n 
C15 H151 CHD sing 114 n n 
C15 H152 CHD sing 115 n n 
C16 C17 CHD sing 116 n n 
C16 H161 CHD sing 117 n n 
C16 H162 CHD sing 118 n n 
C17 C20 CHD sing 119 n n 
C17 H17 CHD sing 120 n n 
C18 H181 CHD sing 121 n n 
C18 H182 CHD sing 122 n n 
C18 H183 CHD sing 123 n n 
C19 H191 CHD sing 124 n n 
C19 H192 CHD sing 125 n n 
C19 H193 CHD sing 126 n n 
C20 C21 CHD sing 127 n n 
C20 C22 CHD sing 128 n n 
C20 H20 CHD sing 129 n n 
C21 H211 CHD sing 130 n n 
C21 H212 CHD sing 131 n n 
C21 H213 CHD sing 132 n n 
C22 C23 CHD sing 133 n n 
C22 H221 CHD sing 134 n n 
C22 H222 CHD sing 135 n n 
C23 C24 CHD sing 136 n n 
C23 H231 CHD sing 137 n n 
C23 H232 CHD sing 138 n n 
O25 C24 CHD doub 139 n n 
C24 O26 CHD sing 140 n n 
O26 H26 CHD sing 141 n n 
#
_atom_sites.entry_id                     3EM0 
_atom_sites.fract_transf_matrix[1][1]    0.010386 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.008012 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011725 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016827 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CHD A 1 150 150 CHD CHD . 
D 2 CHD A 1 151 151 CHD CHD . 
E 2 CHD A 1 152 152 CHD CHD . 
F 2 CHD A 1 153 153 CHD CHD . 
G 2 CHD B 1 150 150 CHD CHD . 
H 2 CHD B 1 151 151 CHD CHD . 
I 2 CHD B 1 152 152 CHD CHD . 
J 2 CHD B 1 153 153 CHD CHD . 
K 2 CHD B 1 500 500 CHD CHD . 
L 3 HOH A 1 501 1 HOH HOH . 
L 3 HOH A 2 503 3 HOH HOH . 
L 3 HOH A 3 507 7 HOH HOH . 
L 3 HOH A 4 508 8 HOH HOH . 
L 3 HOH A 5 509 9 HOH HOH . 
L 3 HOH A 6 513 13 HOH HOH . 
L 3 HOH A 7 514 14 HOH HOH . 
L 3 HOH A 8 518 18 HOH HOH . 
L 3 HOH A 9 521 21 HOH HOH . 
L 3 HOH A 10 523 23 HOH HOH . 
L 3 HOH A 11 524 24 HOH HOH . 
L 3 HOH A 12 526 26 HOH HOH . 
L 3 HOH A 13 529 29 HOH HOH . 
L 3 HOH A 14 531 31 HOH HOH . 
L 3 HOH A 15 533 33 HOH HOH . 
L 3 HOH A 16 536 36 HOH HOH . 
L 3 HOH A 17 538 38 HOH HOH . 
L 3 HOH A 18 539 40 HOH HOH . 
L 3 HOH A 19 540 41 HOH HOH . 
L 3 HOH A 20 546 47 HOH HOH . 
L 3 HOH A 21 549 50 HOH HOH . 
L 3 HOH A 22 550 51 HOH HOH . 
L 3 HOH A 23 551 52 HOH HOH . 
L 3 HOH A 24 555 56 HOH HOH . 
L 3 HOH A 25 556 57 HOH HOH . 
L 3 HOH A 26 557 58 HOH HOH . 
L 3 HOH A 27 558 59 HOH HOH . 
L 3 HOH A 28 559 60 HOH HOH . 
L 3 HOH A 29 561 62 HOH HOH . 
L 3 HOH A 30 565 66 HOH HOH . 
L 3 HOH A 31 567 68 HOH HOH . 
L 3 HOH A 32 569 70 HOH HOH . 
M 3 HOH B 1 502 2 HOH HOH . 
M 3 HOH B 2 504 4 HOH HOH . 
M 3 HOH B 3 505 5 HOH HOH . 
M 3 HOH B 4 506 6 HOH HOH . 
M 3 HOH B 5 510 10 HOH HOH . 
M 3 HOH B 6 511 11 HOH HOH . 
M 3 HOH B 7 512 12 HOH HOH . 
M 3 HOH B 8 515 15 HOH HOH . 
M 3 HOH B 9 516 16 HOH HOH . 
M 3 HOH B 10 517 17 HOH HOH . 
M 3 HOH B 11 519 19 HOH HOH . 
M 3 HOH B 12 520 20 HOH HOH . 
M 3 HOH B 13 522 22 HOH HOH . 
M 3 HOH B 14 525 25 HOH HOH . 
M 3 HOH B 15 527 27 HOH HOH . 
M 3 HOH B 16 528 28 HOH HOH . 
M 3 HOH B 17 530 30 HOH HOH . 
M 3 HOH B 18 532 32 HOH HOH . 
M 3 HOH B 19 534 34 HOH HOH . 
M 3 HOH B 20 535 35 HOH HOH . 
M 3 HOH B 21 537 37 HOH HOH . 
M 3 HOH B 22 541 42 HOH HOH . 
M 3 HOH B 23 542 43 HOH HOH . 
M 3 HOH B 24 543 44 HOH HOH . 
M 3 HOH B 25 544 45 HOH HOH . 
M 3 HOH B 26 545 46 HOH HOH . 
M 3 HOH B 27 547 48 HOH HOH . 
M 3 HOH B 28 548 49 HOH HOH . 
M 3 HOH B 29 552 53 HOH HOH . 
M 3 HOH B 30 553 54 HOH HOH . 
M 3 HOH B 31 554 55 HOH HOH . 
M 3 HOH B 32 560 61 HOH HOH . 
M 3 HOH B 33 562 63 HOH HOH . 
M 3 HOH B 34 563 64 HOH HOH . 
M 3 HOH B 35 564 65 HOH HOH . 
M 3 HOH B 36 566 67 HOH HOH . 
M 3 HOH B 37 568 69 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 CHD . . . K 2 -48.09 -9.494 -3.962 1 43.35 ? C1 CHD 500 B 1 
HETATM 2 C C2 CHD . . . K 2 -48.781 -8.426 -4.831 1 42.72 ? C2 CHD 500 B 1 
HETATM 3 C C3 CHD . . . K 2 -49.345 -7.279 -3.983 1 43.22 ? C3 CHD 500 B 1 
HETATM 4 O O3 CHD . . . K 2 -50.081 -6.397 -4.834 1 43.73 ? O3 CHD 500 B 1 
HETATM 5 C C4 CHD . . . K 2 -50.285 -7.809 -2.885 1 43.73 ? C4 CHD 500 B 1 
HETATM 6 C C5 CHD . . . K 2 -49.606 -8.906 -2.013 1 43.72 ? C5 CHD 500 B 1 
HETATM 7 C C6 CHD . . . K 2 -50.593 -9.38 -0.912 1 42.77 ? C6 CHD 500 B 1 
HETATM 8 C C7 CHD . . . K 2 -51.653 -10.397 -1.42 1 42.89 ? C7 CHD 500 B 1 
HETATM 9 O O7 CHD . . . K 2 -52.699 -9.683 -2.08 1 42.26 ? O7 CHD 500 B 1 
HETATM 10 C C8 CHD . . . K 2 -51.085 -11.526 -2.338 1 42.94 ? C8 CHD 500 B 1 
HETATM 11 C C9 CHD . . . K 2 -50.136 -10.956 -3.436 1 43.55 ? C9 CHD 500 B 1 
HETATM 12 C C10 CHD . . . K 2 -48.986 -10.081 -2.848 1 43.88 ? C10 CHD 500 B 1 
HETATM 13 C C11 CHD . . . K 2 -49.63 -12.042 -4.442 1 43.73 ? C11 CHD 500 B 1 
HETATM 14 C C12 CHD . . . K 2 -50.788 -12.866 -5.033 1 43.94 ? C12 CHD 500 B 1 
HETATM 15 O O12 CHD . . . K 2 -51.565 -11.989 -5.882 1 43.83 ? O12 CHD 500 B 1 
HETATM 16 C C13 CHD . . . K 2 -51.615 -13.536 -3.893 1 43.34 ? C13 CHD 500 B 1 
HETATM 17 C C14 CHD . . . K 2 -52.185 -12.404 -3.009 1 43.24 ? C14 CHD 500 B 1 
HETATM 18 C C15 CHD . . . K 2 -53.134 -13.159 -2.077 1 43.32 ? C15 CHD 500 B 1 
HETATM 19 C C16 CHD . . . K 2 -53.871 -14.083 -3.074 1 43.94 ? C16 CHD 500 B 1 
HETATM 20 C C17 CHD . . . K 2 -52.956 -14.216 -4.337 1 44.28 ? C17 CHD 500 B 1 
HETATM 21 C C18 CHD . . . K 2 -50.736 -14.545 -3.101 1 42.35 ? C18 CHD 500 B 1 
HETATM 22 C C19 CHD . . . K 2 -48.062 -10.91 -1.937 1 44.45 ? C19 CHD 500 B 1 
HETATM 23 C C20 CHD . . . K 2 -52.897 -15.708 -4.818 1 45.61 ? C20 CHD 500 B 1 
HETATM 24 C C21 CHD . . . K 2 -51.934 -15.938 -5.987 1 45.75 ? C21 CHD 500 B 1 
HETATM 25 C C22 CHD . . . K 2 -54.278 -16.277 -5.219 1 46.78 ? C22 CHD 500 B 1 
HETATM 26 C C23 CHD . . . K 2 -54.806 -17.335 -4.229 1 49.42 ? C23 CHD 500 B 1 
HETATM 27 O O25 CHD . . . K 2 -54.753 -19.552 -5.082 1 53.41 ? O25 CHD 500 B 1 
HETATM 28 C C24 CHD . . . K 2 -54.136 -18.709 -4.393 1 51.07 ? C24 CHD 500 B 1 
HETATM 29 O O26 CHD . . . K 2 -53.033 -18.901 -3.825 1 50.31 ? O26 CHD 500 B 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           29 
#