data_3EM1
#
_model_server_result.job_id            wCcP1WU2oWYfa24SJgNyfw 
_model_server_result.datetime_utc      '2024-11-13 07:18:14' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3em1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":142}' 
#
_entry.id    3EM1 
#
_exptl.entry_id    3EM1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3EM1 
_cell.length_a            70.343 
_cell.length_b            70.343 
_cell.length_c            104.137 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3EM1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        173 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 63' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 70.343 0 0 
3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 35.1715 60.918825 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 C MG MG . A MG 142 1_555 D O2B TYD . A TYD 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? 
metalc ? metalc2 C MG MG . A MG 142 1_555 D O2A TYD . A TYD 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? 
metalc ? metalc3 C MG MG . A MG 142 1_555 G O HOH . A HOH 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? 
metalc ? metalc4 E MG MG . B MG 142 1_555 F O2A TYD . B TYD 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? 
metalc ? metalc5 E MG MG . B MG 142 1_555 F O2B TYD . B TYD 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? 
metalc ? metalc6 E MG MG . B MG 142 1_555 H O HOH . B HOH 258 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? 
metalc ? metalc7 E MG MG . B MG 142 1_555 H O HOH . B HOH 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3EM1 
_atom_sites.fract_transf_matrix[1][1]    0.014216 
_atom_sites.fract_transf_matrix[1][2]    0.008208 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016415 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009603 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MG A 1 142 1 MG MG . 
D 3 TYD A 1 143 1 TYD TYD . 
E 2 MG B 1 142 1 MG MG . 
F 3 TYD B 1 143 1 TYD TYD . 
G 4 HOH A 1 144 1 HOH HOH . 
G 4 HOH A 2 145 4 HOH HOH . 
G 4 HOH A 3 146 6 HOH HOH . 
G 4 HOH A 4 147 8 HOH HOH . 
G 4 HOH A 5 148 9 HOH HOH . 
G 4 HOH A 6 149 10 HOH HOH . 
G 4 HOH A 7 150 11 HOH HOH . 
G 4 HOH A 8 151 12 HOH HOH . 
G 4 HOH A 9 152 13 HOH HOH . 
G 4 HOH A 10 153 16 HOH HOH . 
G 4 HOH A 11 154 17 HOH HOH . 
G 4 HOH A 12 155 19 HOH HOH . 
G 4 HOH A 13 156 21 HOH HOH . 
G 4 HOH A 14 157 22 HOH HOH . 
G 4 HOH A 15 158 23 HOH HOH . 
G 4 HOH A 16 159 24 HOH HOH . 
G 4 HOH A 17 160 25 HOH HOH . 
G 4 HOH A 18 161 28 HOH HOH . 
G 4 HOH A 19 162 31 HOH HOH . 
G 4 HOH A 20 163 32 HOH HOH . 
G 4 HOH A 21 164 34 HOH HOH . 
G 4 HOH A 22 165 35 HOH HOH . 
G 4 HOH A 23 166 36 HOH HOH . 
G 4 HOH A 24 167 37 HOH HOH . 
G 4 HOH A 25 168 40 HOH HOH . 
G 4 HOH A 26 169 45 HOH HOH . 
G 4 HOH A 27 170 46 HOH HOH . 
G 4 HOH A 28 171 48 HOH HOH . 
G 4 HOH A 29 172 49 HOH HOH . 
G 4 HOH A 30 173 50 HOH HOH . 
G 4 HOH A 31 174 51 HOH HOH . 
G 4 HOH A 32 175 55 HOH HOH . 
G 4 HOH A 33 176 57 HOH HOH . 
G 4 HOH A 34 177 59 HOH HOH . 
G 4 HOH A 35 178 61 HOH HOH . 
G 4 HOH A 36 179 65 HOH HOH . 
G 4 HOH A 37 180 67 HOH HOH . 
G 4 HOH A 38 181 70 HOH HOH . 
G 4 HOH A 39 182 72 HOH HOH . 
G 4 HOH A 40 183 73 HOH HOH . 
G 4 HOH A 41 184 74 HOH HOH . 
G 4 HOH A 42 185 75 HOH HOH . 
G 4 HOH A 43 186 80 HOH HOH . 
G 4 HOH A 44 187 81 HOH HOH . 
G 4 HOH A 45 188 83 HOH HOH . 
G 4 HOH A 46 189 86 HOH HOH . 
G 4 HOH A 47 190 89 HOH HOH . 
G 4 HOH A 48 191 90 HOH HOH . 
G 4 HOH A 49 192 91 HOH HOH . 
G 4 HOH A 50 193 94 HOH HOH . 
G 4 HOH A 51 194 95 HOH HOH . 
G 4 HOH A 52 195 97 HOH HOH . 
G 4 HOH A 53 196 100 HOH HOH . 
G 4 HOH A 54 197 102 HOH HOH . 
G 4 HOH A 55 198 103 HOH HOH . 
G 4 HOH A 56 199 105 HOH HOH . 
G 4 HOH A 57 200 108 HOH HOH . 
G 4 HOH A 58 201 110 HOH HOH . 
G 4 HOH A 59 202 112 HOH HOH . 
G 4 HOH A 60 203 115 HOH HOH . 
G 4 HOH A 61 204 116 HOH HOH . 
G 4 HOH A 62 205 119 HOH HOH . 
G 4 HOH A 63 206 122 HOH HOH . 
G 4 HOH A 64 207 123 HOH HOH . 
G 4 HOH A 65 208 124 HOH HOH . 
G 4 HOH A 66 209 126 HOH HOH . 
G 4 HOH A 67 210 128 HOH HOH . 
G 4 HOH A 68 211 129 HOH HOH . 
G 4 HOH A 69 212 130 HOH HOH . 
G 4 HOH A 70 213 131 HOH HOH . 
G 4 HOH A 71 214 134 HOH HOH . 
G 4 HOH A 72 215 138 HOH HOH . 
G 4 HOH A 73 216 140 HOH HOH . 
G 4 HOH A 74 217 141 HOH HOH . 
G 4 HOH A 75 218 142 HOH HOH . 
G 4 HOH A 76 219 143 HOH HOH . 
G 4 HOH A 77 220 144 HOH HOH . 
G 4 HOH A 78 221 146 HOH HOH . 
G 4 HOH A 79 222 147 HOH HOH . 
G 4 HOH A 80 223 148 HOH HOH . 
G 4 HOH A 81 224 149 HOH HOH . 
G 4 HOH A 82 225 151 HOH HOH . 
G 4 HOH A 83 226 152 HOH HOH . 
G 4 HOH A 84 227 156 HOH HOH . 
G 4 HOH A 85 228 158 HOH HOH . 
G 4 HOH A 86 229 162 HOH HOH . 
G 4 HOH A 87 230 163 HOH HOH . 
G 4 HOH A 88 231 165 HOH HOH . 
G 4 HOH A 89 232 167 HOH HOH . 
G 4 HOH A 90 233 171 HOH HOH . 
G 4 HOH A 91 234 172 HOH HOH . 
G 4 HOH A 92 235 180 HOH HOH . 
G 4 HOH A 93 236 181 HOH HOH . 
G 4 HOH A 94 237 182 HOH HOH . 
G 4 HOH A 95 238 183 HOH HOH . 
G 4 HOH A 96 239 184 HOH HOH . 
G 4 HOH A 97 240 189 HOH HOH . 
G 4 HOH A 98 241 192 HOH HOH . 
G 4 HOH A 99 242 194 HOH HOH . 
G 4 HOH A 100 243 195 HOH HOH . 
G 4 HOH A 101 244 200 HOH HOH . 
G 4 HOH A 102 245 203 HOH HOH . 
G 4 HOH A 103 246 204 HOH HOH . 
G 4 HOH A 104 247 205 HOH HOH . 
G 4 HOH A 105 248 208 HOH HOH . 
G 4 HOH A 106 249 210 HOH HOH . 
G 4 HOH A 107 250 214 HOH HOH . 
G 4 HOH A 108 251 218 HOH HOH . 
G 4 HOH A 109 252 220 HOH HOH . 
G 4 HOH A 110 253 222 HOH HOH . 
G 4 HOH A 111 254 226 HOH HOH . 
G 4 HOH A 112 255 227 HOH HOH . 
G 4 HOH A 113 256 228 HOH HOH . 
G 4 HOH A 114 257 229 HOH HOH . 
G 4 HOH A 115 258 231 HOH HOH . 
G 4 HOH A 116 259 232 HOH HOH . 
G 4 HOH A 117 260 233 HOH HOH . 
G 4 HOH A 118 261 188 HOH HOH . 
H 4 HOH B 1 232 166 HOH HOH . 
H 4 HOH B 2 233 2 HOH HOH . 
H 4 HOH B 3 234 3 HOH HOH . 
H 4 HOH B 4 235 5 HOH HOH . 
H 4 HOH B 5 236 7 HOH HOH . 
H 4 HOH B 6 237 14 HOH HOH . 
H 4 HOH B 7 238 15 HOH HOH . 
H 4 HOH B 8 239 18 HOH HOH . 
H 4 HOH B 9 240 20 HOH HOH . 
H 4 HOH B 10 241 26 HOH HOH . 
H 4 HOH B 11 242 27 HOH HOH . 
H 4 HOH B 12 243 29 HOH HOH . 
H 4 HOH B 13 244 30 HOH HOH . 
H 4 HOH B 14 245 33 HOH HOH . 
H 4 HOH B 15 246 38 HOH HOH . 
H 4 HOH B 16 247 39 HOH HOH . 
H 4 HOH B 17 248 41 HOH HOH . 
H 4 HOH B 18 249 42 HOH HOH . 
H 4 HOH B 19 250 43 HOH HOH . 
H 4 HOH B 20 251 44 HOH HOH . 
H 4 HOH B 21 252 47 HOH HOH . 
H 4 HOH B 22 253 52 HOH HOH . 
H 4 HOH B 23 254 53 HOH HOH . 
H 4 HOH B 24 255 54 HOH HOH . 
H 4 HOH B 25 256 56 HOH HOH . 
H 4 HOH B 26 257 58 HOH HOH . 
H 4 HOH B 27 258 60 HOH HOH . 
H 4 HOH B 28 259 62 HOH HOH . 
H 4 HOH B 29 260 63 HOH HOH . 
H 4 HOH B 30 261 64 HOH HOH . 
H 4 HOH B 31 262 66 HOH HOH . 
H 4 HOH B 32 263 68 HOH HOH . 
H 4 HOH B 33 264 69 HOH HOH . 
H 4 HOH B 34 265 71 HOH HOH . 
H 4 HOH B 35 266 76 HOH HOH . 
H 4 HOH B 36 267 77 HOH HOH . 
H 4 HOH B 37 268 78 HOH HOH . 
H 4 HOH B 38 269 79 HOH HOH . 
H 4 HOH B 39 270 82 HOH HOH . 
H 4 HOH B 40 271 84 HOH HOH . 
H 4 HOH B 41 272 85 HOH HOH . 
H 4 HOH B 42 273 87 HOH HOH . 
H 4 HOH B 43 274 88 HOH HOH . 
H 4 HOH B 44 275 92 HOH HOH . 
H 4 HOH B 45 276 93 HOH HOH . 
H 4 HOH B 46 277 96 HOH HOH . 
H 4 HOH B 47 278 98 HOH HOH . 
H 4 HOH B 48 279 99 HOH HOH . 
H 4 HOH B 49 280 101 HOH HOH . 
H 4 HOH B 50 281 104 HOH HOH . 
H 4 HOH B 51 282 106 HOH HOH . 
H 4 HOH B 52 283 107 HOH HOH . 
H 4 HOH B 53 284 109 HOH HOH . 
H 4 HOH B 54 285 111 HOH HOH . 
H 4 HOH B 55 286 113 HOH HOH . 
H 4 HOH B 56 287 114 HOH HOH . 
H 4 HOH B 57 288 117 HOH HOH . 
H 4 HOH B 58 289 118 HOH HOH . 
H 4 HOH B 59 290 120 HOH HOH . 
H 4 HOH B 60 291 121 HOH HOH . 
H 4 HOH B 61 292 125 HOH HOH . 
H 4 HOH B 62 293 127 HOH HOH . 
H 4 HOH B 63 294 132 HOH HOH . 
H 4 HOH B 64 295 133 HOH HOH . 
H 4 HOH B 65 296 135 HOH HOH . 
H 4 HOH B 66 297 136 HOH HOH . 
H 4 HOH B 67 298 137 HOH HOH . 
H 4 HOH B 68 299 139 HOH HOH . 
H 4 HOH B 69 300 145 HOH HOH . 
H 4 HOH B 70 301 150 HOH HOH . 
H 4 HOH B 71 302 153 HOH HOH . 
H 4 HOH B 72 303 154 HOH HOH . 
H 4 HOH B 73 304 155 HOH HOH . 
H 4 HOH B 74 305 157 HOH HOH . 
H 4 HOH B 75 306 159 HOH HOH . 
H 4 HOH B 76 307 160 HOH HOH . 
H 4 HOH B 77 308 161 HOH HOH . 
H 4 HOH B 78 309 164 HOH HOH . 
H 4 HOH B 79 310 168 HOH HOH . 
H 4 HOH B 80 311 169 HOH HOH . 
H 4 HOH B 81 312 170 HOH HOH . 
H 4 HOH B 82 313 173 HOH HOH . 
H 4 HOH B 83 314 174 HOH HOH . 
H 4 HOH B 84 315 175 HOH HOH . 
H 4 HOH B 85 316 176 HOH HOH . 
H 4 HOH B 86 317 177 HOH HOH . 
H 4 HOH B 87 318 178 HOH HOH . 
H 4 HOH B 88 319 179 HOH HOH . 
H 4 HOH B 89 320 185 HOH HOH . 
H 4 HOH B 90 321 186 HOH HOH . 
H 4 HOH B 91 322 187 HOH HOH . 
H 4 HOH B 92 323 190 HOH HOH . 
H 4 HOH B 93 324 191 HOH HOH . 
H 4 HOH B 94 325 193 HOH HOH . 
H 4 HOH B 95 326 196 HOH HOH . 
H 4 HOH B 96 327 197 HOH HOH . 
H 4 HOH B 97 328 198 HOH HOH . 
H 4 HOH B 98 329 199 HOH HOH . 
H 4 HOH B 99 330 201 HOH HOH . 
H 4 HOH B 100 331 202 HOH HOH . 
H 4 HOH B 101 332 206 HOH HOH . 
H 4 HOH B 102 333 207 HOH HOH . 
H 4 HOH B 103 334 209 HOH HOH . 
H 4 HOH B 104 335 211 HOH HOH . 
H 4 HOH B 105 336 212 HOH HOH . 
H 4 HOH B 106 337 213 HOH HOH . 
H 4 HOH B 107 338 215 HOH HOH . 
H 4 HOH B 108 339 216 HOH HOH . 
H 4 HOH B 109 340 217 HOH HOH . 
H 4 HOH B 110 341 219 HOH HOH . 
H 4 HOH B 111 342 221 HOH HOH . 
H 4 HOH B 112 343 223 HOH HOH . 
H 4 HOH B 113 344 224 HOH HOH . 
H 4 HOH B 114 345 225 HOH HOH . 
H 4 HOH B 115 346 230 HOH HOH . 
H 4 HOH B 116 347 234 HOH HOH . 
H 4 HOH B 117 348 235 HOH HOH . 
H 4 HOH B 118 349 236 HOH HOH . 
H 4 HOH B 119 350 237 HOH HOH . 
H 4 HOH B 120 351 238 HOH HOH . 
H 4 HOH B 121 352 239 HOH HOH . 
H 4 HOH B 122 353 240 HOH HOH . 
H 4 HOH B 123 354 241 HOH HOH . 
H 4 HOH B 124 355 242 HOH HOH . 
H 4 HOH B 125 356 243 HOH HOH . 
H 4 HOH B 126 357 244 HOH HOH . 
H 4 HOH B 127 358 245 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               55.279 
_atom_site.Cartn_y               25.409 
_atom_site.Cartn_z               -8.682 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        25.67 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           142 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#