data_3EMB # _model_server_result.job_id tRYv6rRMMQLEZamsSOgj7A _model_server_result.datetime_utc '2024-11-29 14:08:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3emb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":4636}' # _entry.id 3EMB # _exptl.entry_id 3EMB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3EMB _cell.length_a 37.236 _cell.length_b 61.297 _cell.length_c 128.012 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3EMB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 428 n n S O2 SO4 doub 429 n n S O3 SO4 sing 430 n n S O4 SO4 sing 431 n n # _atom_sites.entry_id 3EMB _atom_sites.fract_transf_matrix[1][1] 0.026856 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016314 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007812 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SAM A 1 4633 4633 SAM SAM . C 3 GTG A 1 4634 1 GTG GTG . D 4 SO4 A 1 4635 4 SO4 SO4 . E 4 SO4 A 1 4636 5 SO4 SO4 . F 5 HOH A 1 4637 1 HOH HOH . F 5 HOH A 2 4638 2 HOH HOH . F 5 HOH A 3 4639 3 HOH HOH . F 5 HOH A 4 4640 4 HOH HOH . F 5 HOH A 5 4641 5 HOH HOH . F 5 HOH A 6 4642 6 HOH HOH . F 5 HOH A 7 4643 7 HOH HOH . F 5 HOH A 8 4644 8 HOH HOH . F 5 HOH A 9 4645 9 HOH HOH . F 5 HOH A 10 4646 10 HOH HOH . F 5 HOH A 11 4647 11 HOH HOH . F 5 HOH A 12 4648 12 HOH HOH . F 5 HOH A 13 4649 13 HOH HOH . F 5 HOH A 14 4650 14 HOH HOH . F 5 HOH A 15 4651 15 HOH HOH . F 5 HOH A 16 4652 16 HOH HOH . F 5 HOH A 17 4653 17 HOH HOH . F 5 HOH A 18 4654 18 HOH HOH . F 5 HOH A 19 4655 19 HOH HOH . F 5 HOH A 20 4656 20 HOH HOH . F 5 HOH A 21 4657 21 HOH HOH . F 5 HOH A 22 4658 22 HOH HOH . F 5 HOH A 23 4659 23 HOH HOH . F 5 HOH A 24 4660 24 HOH HOH . F 5 HOH A 25 4661 26 HOH HOH . F 5 HOH A 26 4662 27 HOH HOH . F 5 HOH A 27 4663 28 HOH HOH . F 5 HOH A 28 4664 29 HOH HOH . F 5 HOH A 29 4665 30 HOH HOH . F 5 HOH A 30 4666 31 HOH HOH . F 5 HOH A 31 4667 32 HOH HOH . F 5 HOH A 32 4668 33 HOH HOH . F 5 HOH A 33 4669 34 HOH HOH . F 5 HOH A 34 4670 35 HOH HOH . F 5 HOH A 35 4671 36 HOH HOH . F 5 HOH A 36 4672 37 HOH HOH . F 5 HOH A 37 4673 39 HOH HOH . F 5 HOH A 38 4674 40 HOH HOH . F 5 HOH A 39 4675 41 HOH HOH . F 5 HOH A 40 4676 42 HOH HOH . F 5 HOH A 41 4677 43 HOH HOH . F 5 HOH A 42 4678 44 HOH HOH . F 5 HOH A 43 4679 45 HOH HOH . F 5 HOH A 44 4680 46 HOH HOH . F 5 HOH A 45 4681 47 HOH HOH . F 5 HOH A 46 4682 48 HOH HOH . F 5 HOH A 47 4683 49 HOH HOH . F 5 HOH A 48 4684 50 HOH HOH . F 5 HOH A 49 4685 51 HOH HOH . F 5 HOH A 50 4686 53 HOH HOH . F 5 HOH A 51 4687 54 HOH HOH . F 5 HOH A 52 4688 55 HOH HOH . F 5 HOH A 53 4689 56 HOH HOH . F 5 HOH A 54 4690 57 HOH HOH . F 5 HOH A 55 4691 58 HOH HOH . F 5 HOH A 56 4692 59 HOH HOH . F 5 HOH A 57 4693 61 HOH HOH . F 5 HOH A 58 4694 62 HOH HOH . F 5 HOH A 59 4695 63 HOH HOH . F 5 HOH A 60 4696 64 HOH HOH . F 5 HOH A 61 4697 65 HOH HOH . F 5 HOH A 62 4698 66 HOH HOH . F 5 HOH A 63 4699 67 HOH HOH . F 5 HOH A 64 4700 68 HOH HOH . F 5 HOH A 65 4701 69 HOH HOH . F 5 HOH A 66 4702 70 HOH HOH . F 5 HOH A 67 4703 71 HOH HOH . F 5 HOH A 68 4704 72 HOH HOH . F 5 HOH A 69 4705 73 HOH HOH . F 5 HOH A 70 4706 74 HOH HOH . F 5 HOH A 71 4707 75 HOH HOH . F 5 HOH A 72 4708 76 HOH HOH . F 5 HOH A 73 4709 77 HOH HOH . F 5 HOH A 74 4710 78 HOH HOH . F 5 HOH A 75 4711 79 HOH HOH . F 5 HOH A 76 4712 80 HOH HOH . F 5 HOH A 77 4713 81 HOH HOH . F 5 HOH A 78 4714 82 HOH HOH . F 5 HOH A 79 4715 83 HOH HOH . F 5 HOH A 80 4716 84 HOH HOH . F 5 HOH A 81 4717 85 HOH HOH . F 5 HOH A 82 4718 86 HOH HOH . F 5 HOH A 83 4719 88 HOH HOH . F 5 HOH A 84 4720 89 HOH HOH . F 5 HOH A 85 4721 90 HOH HOH . F 5 HOH A 86 4722 91 HOH HOH . F 5 HOH A 87 4723 92 HOH HOH . F 5 HOH A 88 4724 93 HOH HOH . F 5 HOH A 89 4725 94 HOH HOH . F 5 HOH A 90 4726 95 HOH HOH . F 5 HOH A 91 4727 97 HOH HOH . F 5 HOH A 92 4728 98 HOH HOH . F 5 HOH A 93 4729 99 HOH HOH . F 5 HOH A 94 4730 102 HOH HOH . F 5 HOH A 95 4731 103 HOH HOH . F 5 HOH A 96 4732 104 HOH HOH . F 5 HOH A 97 4733 106 HOH HOH . F 5 HOH A 98 4734 108 HOH HOH . F 5 HOH A 99 4735 109 HOH HOH . F 5 HOH A 100 4736 110 HOH HOH . F 5 HOH A 101 4737 113 HOH HOH . F 5 HOH A 102 4738 117 HOH HOH . F 5 HOH A 103 4739 118 HOH HOH . F 5 HOH A 104 4740 120 HOH HOH . F 5 HOH A 105 4741 121 HOH HOH . F 5 HOH A 106 4742 122 HOH HOH . F 5 HOH A 107 4743 124 HOH HOH . F 5 HOH A 108 4744 126 HOH HOH . F 5 HOH A 109 4745 127 HOH HOH . F 5 HOH A 110 4746 128 HOH HOH . F 5 HOH A 111 4747 129 HOH HOH . F 5 HOH A 112 4748 130 HOH HOH . F 5 HOH A 113 4749 131 HOH HOH . F 5 HOH A 114 4750 133 HOH HOH . F 5 HOH A 115 4751 134 HOH HOH . F 5 HOH A 116 4752 135 HOH HOH . F 5 HOH A 117 4753 136 HOH HOH . F 5 HOH A 118 4754 137 HOH HOH . F 5 HOH A 119 4755 140 HOH HOH . F 5 HOH A 120 4756 141 HOH HOH . F 5 HOH A 121 4757 142 HOH HOH . F 5 HOH A 122 4758 143 HOH HOH . F 5 HOH A 123 4759 146 HOH HOH . F 5 HOH A 124 4760 149 HOH HOH . F 5 HOH A 125 4761 150 HOH HOH . F 5 HOH A 126 4762 152 HOH HOH . F 5 HOH A 127 4763 154 HOH HOH . F 5 HOH A 128 4764 155 HOH HOH . F 5 HOH A 129 4765 156 HOH HOH . F 5 HOH A 130 4766 157 HOH HOH . F 5 HOH A 131 4767 158 HOH HOH . F 5 HOH A 132 4768 159 HOH HOH . F 5 HOH A 133 4769 161 HOH HOH . F 5 HOH A 134 4770 163 HOH HOH . F 5 HOH A 135 4771 164 HOH HOH . F 5 HOH A 136 4772 165 HOH HOH . F 5 HOH A 137 4773 166 HOH HOH . F 5 HOH A 138 4774 168 HOH HOH . F 5 HOH A 139 4775 169 HOH HOH . F 5 HOH A 140 4776 171 HOH HOH . F 5 HOH A 141 4777 172 HOH HOH . F 5 HOH A 142 4778 174 HOH HOH . F 5 HOH A 143 4779 175 HOH HOH . F 5 HOH A 144 4780 176 HOH HOH . F 5 HOH A 145 4781 177 HOH HOH . F 5 HOH A 146 4782 179 HOH HOH . F 5 HOH A 147 4783 180 HOH HOH . F 5 HOH A 148 4784 181 HOH HOH . F 5 HOH A 149 4785 182 HOH HOH . F 5 HOH A 150 4786 183 HOH HOH . F 5 HOH A 151 4787 184 HOH HOH . F 5 HOH A 152 4788 185 HOH HOH . F 5 HOH A 153 4789 186 HOH HOH . F 5 HOH A 154 4790 187 HOH HOH . F 5 HOH A 155 4791 188 HOH HOH . F 5 HOH A 156 4792 189 HOH HOH . F 5 HOH A 157 4793 190 HOH HOH . F 5 HOH A 158 4794 191 HOH HOH . F 5 HOH A 159 4795 192 HOH HOH . F 5 HOH A 160 4796 193 HOH HOH . F 5 HOH A 161 4797 194 HOH HOH . F 5 HOH A 162 4798 195 HOH HOH . F 5 HOH A 163 4799 198 HOH HOH . F 5 HOH A 164 4800 199 HOH HOH . F 5 HOH A 165 4801 200 HOH HOH . F 5 HOH A 166 4802 204 HOH HOH . F 5 HOH A 167 4803 205 HOH HOH . F 5 HOH A 168 4804 208 HOH HOH . F 5 HOH A 169 4805 209 HOH HOH . F 5 HOH A 170 4806 210 HOH HOH . F 5 HOH A 171 4807 211 HOH HOH . F 5 HOH A 172 4808 213 HOH HOH . F 5 HOH A 173 4809 214 HOH HOH . F 5 HOH A 174 4810 215 HOH HOH . F 5 HOH A 175 4811 216 HOH HOH . F 5 HOH A 176 4812 217 HOH HOH . F 5 HOH A 177 4813 218 HOH HOH . F 5 HOH A 178 4814 219 HOH HOH . F 5 HOH A 179 4815 221 HOH HOH . F 5 HOH A 180 4816 222 HOH HOH . F 5 HOH A 181 4817 224 HOH HOH . F 5 HOH A 182 4818 226 HOH HOH . F 5 HOH A 183 4819 227 HOH HOH . F 5 HOH A 184 4820 228 HOH HOH . F 5 HOH A 185 4821 229 HOH HOH . F 5 HOH A 186 4822 230 HOH HOH . F 5 HOH A 187 4823 233 HOH HOH . F 5 HOH A 188 4824 236 HOH HOH . F 5 HOH A 189 4825 243 HOH HOH . F 5 HOH A 190 4826 244 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . E 4 -11.694 7.081 16.827 0.5 44.45 ? S SO4 4636 A 1 HETATM 2 O O1 SO4 . . . E 4 -10.35 6.547 16.631 0.5 40.4 ? O1 SO4 4636 A 1 HETATM 3 O O2 SO4 . . . E 4 -12.243 7.564 15.556 0.5 38.5 ? O2 SO4 4636 A 1 HETATM 4 O O3 SO4 . . . E 4 -12.565 6.035 17.36 0.5 43.23 ? O3 SO4 4636 A 1 HETATM 5 O O4 SO4 . . . E 4 -11.595 8.18 17.785 0.5 43.05 ? O4 SO4 4636 A 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #