data_3EML # _model_server_result.job_id zGIhKQBCSWMvr_afBeu_tA _model_server_result.datetime_utc '2024-11-22 09:37:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3eml # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 3EML # _exptl.entry_id 3EML _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 337.336 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.32 _cell.angle_gamma 90 _cell.entry_id 3EML _cell.length_a 47.736 _cell.length_b 76.932 _cell.length_c 86.553 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3EML _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 86 A CYS 71 1_555 A SG CYS 174 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 A SG CYS 89 A CYS 74 1_555 A SG CYS 161 A CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 A SG CYS 92 A CYS 77 1_555 A SG CYS 181 A CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf4 A SG CYS 421 A CYS 259 1_555 A SG CYS 424 A CYS 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? # _chem_comp.formula 'C16 H15 N7 O2' _chem_comp.formula_weight 337.336 _chem_comp.id ZMA _chem_comp.mon_nstd_flag . _chem_comp.name 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C7 C1 ZMA doub 435 n y C1 C2 ZMA sing 436 n y C1 H1 ZMA sing 437 n n C2 C3 ZMA doub 438 n y C2 H2 ZMA sing 439 n n C5 C3 ZMA sing 440 n y C3 O4 ZMA sing 441 n n O4 HO4 ZMA sing 442 n n C6 C5 ZMA doub 443 n y C5 H5 ZMA sing 444 n n C7 C6 ZMA sing 445 n y C6 H6 ZMA sing 446 n n C8 C7 ZMA sing 447 n n C9 C8 ZMA sing 448 n n C8 H8 ZMA sing 449 n n C8 H8A ZMA sing 450 n n N10 C9 ZMA sing 451 n n C9 H9 ZMA sing 452 n n C9 H9A ZMA sing 453 n n C11 N10 ZMA sing 454 n n N10 HN10 ZMA sing 455 n n N12 C11 ZMA doub 456 n y C11 N13 ZMA sing 457 n y C18 N12 ZMA sing 458 n y C14 N13 ZMA doub 459 n y N16 C14 ZMA sing 460 n y C14 N15 ZMA sing 461 n n N15 HN15 ZMA sing 462 n n N15 HN1A ZMA sing 463 n n N17 N16 ZMA sing 464 n y C18 N16 ZMA sing 465 n y C20 N17 ZMA doub 466 n y N19 C18 ZMA doub 467 n y C20 N19 ZMA sing 468 n y C21 C20 ZMA sing 469 n y C22 C21 ZMA doub 470 n y O25 C21 ZMA sing 471 n y C23 C22 ZMA sing 472 n y C22 H22 ZMA sing 473 n n C23 C24 ZMA doub 474 n y C23 H23 ZMA sing 475 n n C24 O25 ZMA sing 476 n y C24 H24 ZMA sing 477 n n # _atom_sites.entry_id 3EML _atom_sites.fract_transf_matrix[1][1] 0.020949 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004194 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012998 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011783 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZMA A 1 401 401 ZMA ZMA . C 3 STE A 1 402 402 STE STE . D 3 STE A 1 403 403 STE STE . E 3 STE A 1 404 404 STE STE . F 3 STE A 1 405 405 STE STE . G 3 STE A 1 406 406 STE STE . H 4 SO4 A 1 407 407 SO4 SO4 . I 4 SO4 A 1 408 408 SO4 SO4 . J 4 SO4 A 1 409 409 SO4 SO4 . K 4 SO4 A 1 410 410 SO4 SO4 . L 4 SO4 A 1 411 411 SO4 SO4 . M 4 SO4 A 1 412 412 SO4 SO4 . N 4 SO4 A 1 413 413 SO4 SO4 . O 5 HOH A 1 501 501 HOH HOH . O 5 HOH A 2 502 502 HOH HOH . O 5 HOH A 3 503 503 HOH HOH . O 5 HOH A 4 504 504 HOH HOH . O 5 HOH A 5 505 505 HOH HOH . O 5 HOH A 6 506 506 HOH HOH . O 5 HOH A 7 507 507 HOH HOH . O 5 HOH A 8 508 508 HOH HOH . O 5 HOH A 9 509 509 HOH HOH . O 5 HOH A 10 510 510 HOH HOH . O 5 HOH A 11 511 511 HOH HOH . O 5 HOH A 12 512 512 HOH HOH . O 5 HOH A 13 513 513 HOH HOH . O 5 HOH A 14 514 514 HOH HOH . O 5 HOH A 15 515 515 HOH HOH . O 5 HOH A 16 516 516 HOH HOH . O 5 HOH A 17 517 517 HOH HOH . O 5 HOH A 18 518 518 HOH HOH . O 5 HOH A 19 519 519 HOH HOH . O 5 HOH A 20 520 520 HOH HOH . O 5 HOH A 21 521 521 HOH HOH . O 5 HOH A 22 522 522 HOH HOH . O 5 HOH A 23 523 523 HOH HOH . O 5 HOH A 24 524 524 HOH HOH . O 5 HOH A 25 525 525 HOH HOH . O 5 HOH A 26 526 526 HOH HOH . O 5 HOH A 27 527 527 HOH HOH . O 5 HOH A 28 528 528 HOH HOH . O 5 HOH A 29 529 529 HOH HOH . O 5 HOH A 30 530 530 HOH HOH . O 5 HOH A 31 531 531 HOH HOH . O 5 HOH A 32 532 532 HOH HOH . O 5 HOH A 33 533 533 HOH HOH . O 5 HOH A 34 534 534 HOH HOH . O 5 HOH A 35 535 535 HOH HOH . O 5 HOH A 36 536 536 HOH HOH . O 5 HOH A 37 537 537 HOH HOH . O 5 HOH A 38 538 538 HOH HOH . O 5 HOH A 39 539 539 HOH HOH . O 5 HOH A 40 540 540 HOH HOH . O 5 HOH A 41 541 541 HOH HOH . O 5 HOH A 42 542 542 HOH HOH . O 5 HOH A 43 543 543 HOH HOH . O 5 HOH A 44 544 544 HOH HOH . O 5 HOH A 45 545 545 HOH HOH . O 5 HOH A 46 546 546 HOH HOH . O 5 HOH A 47 547 547 HOH HOH . O 5 HOH A 48 548 548 HOH HOH . O 5 HOH A 49 549 549 HOH HOH . O 5 HOH A 50 550 550 HOH HOH . O 5 HOH A 51 551 551 HOH HOH . O 5 HOH A 52 552 552 HOH HOH . O 5 HOH A 53 553 553 HOH HOH . O 5 HOH A 54 554 554 HOH HOH . O 5 HOH A 55 555 555 HOH HOH . O 5 HOH A 56 556 556 HOH HOH . O 5 HOH A 57 557 557 HOH HOH . O 5 HOH A 58 558 558 HOH HOH . O 5 HOH A 59 559 559 HOH HOH . O 5 HOH A 60 560 560 HOH HOH . O 5 HOH A 61 561 561 HOH HOH . O 5 HOH A 62 562 562 HOH HOH . O 5 HOH A 63 563 563 HOH HOH . O 5 HOH A 64 564 564 HOH HOH . O 5 HOH A 65 565 565 HOH HOH . O 5 HOH A 66 566 566 HOH HOH . O 5 HOH A 67 567 567 HOH HOH . O 5 HOH A 68 568 568 HOH HOH . O 5 HOH A 69 569 569 HOH HOH . O 5 HOH A 70 570 570 HOH HOH . O 5 HOH A 71 571 571 HOH HOH . O 5 HOH A 72 572 572 HOH HOH . O 5 HOH A 73 573 573 HOH HOH . O 5 HOH A 74 574 574 HOH HOH . O 5 HOH A 75 575 575 HOH HOH . O 5 HOH A 76 576 576 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 ZMA . . . B 2 -10.992 -8.796 60.617 1 104.51 ? C1 ZMA 401 A 1 HETATM 2 C C2 ZMA . . . B 2 -11.241 -8.297 61.889 1 106.65 ? C2 ZMA 401 A 1 HETATM 3 C C3 ZMA . . . B 2 -11.984 -7.133 62.045 1 104.03 ? C3 ZMA 401 A 1 HETATM 4 O O4 ZMA . . . B 2 -12.231 -6.638 63.286 1 109.18 ? O4 ZMA 401 A 1 HETATM 5 C C5 ZMA . . . B 2 -12.476 -6.469 60.928 1 95.9 ? C5 ZMA 401 A 1 HETATM 6 C C6 ZMA . . . B 2 -12.23 -6.969 59.657 1 93.55 ? C6 ZMA 401 A 1 HETATM 7 C C7 ZMA . . . B 2 -11.492 -8.135 59.501 1 91.84 ? C7 ZMA 401 A 1 HETATM 8 C C8 ZMA . . . B 2 -11.208 -8.677 58.101 1 72.5 ? C8 ZMA 401 A 1 HETATM 9 C C9 ZMA . . . B 2 -9.746 -9.104 58.006 1 56.96 ? C9 ZMA 401 A 1 HETATM 10 N N10 ZMA . . . B 2 -9.42 -9.544 56.644 1 49.16 ? N10 ZMA 401 A 1 HETATM 11 C C11 ZMA . . . B 2 -8.953 -8.593 55.842 1 53.12 ? C11 ZMA 401 A 1 HETATM 12 N N12 ZMA . . . B 2 -8.585 -8.857 54.578 1 51.75 ? N12 ZMA 401 A 1 HETATM 13 N N13 ZMA . . . B 2 -8.833 -7.359 56.358 1 54.15 ? N13 ZMA 401 A 1 HETATM 14 C C14 ZMA . . . B 2 -8.365 -6.342 55.626 1 57.39 ? C14 ZMA 401 A 1 HETATM 15 N N15 ZMA . . . B 2 -8.266 -5.125 56.156 1 58.08 ? N15 ZMA 401 A 1 HETATM 16 N N16 ZMA . . . B 2 -7.981 -6.582 54.309 1 52.32 ? N16 ZMA 401 A 1 HETATM 17 N N17 ZMA . . . B 2 -7.525 -5.852 53.428 1 49.9 ? N17 ZMA 401 A 1 HETATM 18 C C18 ZMA . . . B 2 -8.104 -7.874 53.8 1 47.64 ? C18 ZMA 401 A 1 HETATM 19 N N19 ZMA . . . B 2 -7.676 -7.829 52.544 1 53.04 ? N19 ZMA 401 A 1 HETATM 20 C C20 ZMA . . . B 2 -7.313 -6.565 52.32 1 51.81 ? C20 ZMA 401 A 1 HETATM 21 C C21 ZMA . . . B 2 -6.809 -6.054 51.131 1 49.8 ? C21 ZMA 401 A 1 HETATM 22 C C22 ZMA . . . B 2 -6.554 -6.688 49.991 1 47.99 ? C22 ZMA 401 A 1 HETATM 23 C C23 ZMA . . . B 2 -6.081 -5.796 49.121 1 53.65 ? C23 ZMA 401 A 1 HETATM 24 C C24 ZMA . . . B 2 -6.034 -4.598 49.703 1 50.25 ? C24 ZMA 401 A 1 HETATM 25 O O25 ZMA . . . B 2 -6.492 -4.739 50.984 1 51.6 ? O25 ZMA 401 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 25 #