data_3ENE # _model_server_result.job_id zVGrvklIdUXymRF-KQD0dQ _model_server_result.datetime_utc '2024-11-19 10:29:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ene # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3ENE # _exptl.entry_id 3ENE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 275.308 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-methyl-3-naphthalen-2-yl-1H-pyrazolo[3,4-d]pyrimidin-4-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.19 _cell.angle_gamma 90 _cell.entry_id 3ENE _cell.length_a 144.302 _cell.length_b 68.244 _cell.length_c 106.069 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ENE _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C16 H13 N5' _chem_comp.formula_weight 275.308 _chem_comp.id NPZ _chem_comp.mon_nstd_flag . _chem_comp.name 1-methyl-3-naphthalen-2-yl-1H-pyrazolo[3,4-d]pyrimidin-4-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 NPZ doub 237 n y N1 C6 NPZ sing 238 n y C2 N3 NPZ sing 239 n y NAF C6 NPZ sing 240 n n C6 C5 NPZ doub 241 n y N3 C4 NPZ doub 242 n y CAB CAA NPZ doub 243 n y CAB CAC NPZ sing 244 n y CAA CAG NPZ sing 245 n y C5 C4 NPZ sing 246 n y C5 CAO NPZ sing 247 n y C4 NAT NPZ sing 248 n y CAD CAC NPZ doub 249 n y CAD CAE NPZ sing 250 n y CAC CAI NPZ sing 251 n y NAT CAU NPZ sing 252 n n NAT NAP NPZ sing 253 n y CAO CAG NPZ sing 254 n y CAO NAP NPZ doub 255 n y CAG CAH NPZ doub 256 n y CAE CAK NPZ doub 257 n y CAI CAH NPZ sing 258 n y CAI CAJ NPZ doub 259 n y CAK CAJ NPZ sing 260 n y NAF H1AF NPZ sing 261 n n NAF H2AF NPZ sing 262 n n C2 H2 NPZ sing 263 n n CAU H1AU NPZ sing 264 n n CAU H2AU NPZ sing 265 n n CAU H3AU NPZ sing 266 n n CAH HAH NPZ sing 267 n n CAA HAA NPZ sing 268 n n CAB HAB NPZ sing 269 n n CAD HAD NPZ sing 270 n n CAE HAE NPZ sing 271 n n CAK HAK NPZ sing 272 n n CAJ HAJ NPZ sing 273 n n # _atom_sites.entry_id 3ENE _atom_sites.fract_transf_matrix[1][1] 0.00693 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00063 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014653 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009467 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NPZ A 1 1 1 NPZ NPZ . C 3 HOH A 1 5 5 HOH HOH . C 3 HOH A 2 9 9 HOH HOH . C 3 HOH A 3 10 10 HOH HOH . C 3 HOH A 4 11 11 HOH HOH . C 3 HOH A 5 12 12 HOH HOH . C 3 HOH A 6 15 15 HOH HOH . C 3 HOH A 7 16 16 HOH HOH . C 3 HOH A 8 17 17 HOH HOH . C 3 HOH A 9 21 21 HOH HOH . C 3 HOH A 10 24 24 HOH HOH . C 3 HOH A 11 26 26 HOH HOH . C 3 HOH A 12 29 29 HOH HOH . C 3 HOH A 13 30 30 HOH HOH . C 3 HOH A 14 31 31 HOH HOH . C 3 HOH A 15 32 32 HOH HOH . C 3 HOH A 16 33 33 HOH HOH . C 3 HOH A 17 34 34 HOH HOH . C 3 HOH A 18 35 35 HOH HOH . C 3 HOH A 19 36 36 HOH HOH . C 3 HOH A 20 38 38 HOH HOH . C 3 HOH A 21 39 39 HOH HOH . C 3 HOH A 22 44 44 HOH HOH . C 3 HOH A 23 49 49 HOH HOH . C 3 HOH A 24 51 51 HOH HOH . C 3 HOH A 25 53 53 HOH HOH . C 3 HOH A 26 58 58 HOH HOH . C 3 HOH A 27 59 59 HOH HOH . C 3 HOH A 28 61 61 HOH HOH . C 3 HOH A 29 67 67 HOH HOH . C 3 HOH A 30 70 70 HOH HOH . C 3 HOH A 31 71 71 HOH HOH . C 3 HOH A 32 74 74 HOH HOH . C 3 HOH A 33 79 79 HOH HOH . C 3 HOH A 34 82 82 HOH HOH . C 3 HOH A 35 83 83 HOH HOH . C 3 HOH A 36 85 85 HOH HOH . C 3 HOH A 37 86 86 HOH HOH . C 3 HOH A 38 99 99 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C6 NPZ . . . B 2 47.13 11.24 30.414 1 37.09 ? C6 NPZ 1 A 1 HETATM 2 N NAF NPZ . . . B 2 46.244 10.242 30.356 1 33.09 ? NAF NPZ 1 A 1 HETATM 3 C C5 NPZ . . . B 2 46.826 12.491 30.973 1 39.43 ? C5 NPZ 1 A 1 HETATM 4 N N1 NPZ . . . B 2 48.365 11.016 29.918 1 40.07 ? N1 NPZ 1 A 1 HETATM 5 C C2 NPZ . . . B 2 49.305 11.976 29.968 1 39.39 ? C2 NPZ 1 A 1 HETATM 6 N N3 NPZ . . . B 2 49.043 13.192 30.467 1 36.27 ? N3 NPZ 1 A 1 HETATM 7 C C4 NPZ . . . B 2 47.82 13.461 30.998 1 38.69 ? C4 NPZ 1 A 1 HETATM 8 N NAT NPZ . . . B 2 47.289 14.54 31.591 1 40.21 ? NAT NPZ 1 A 1 HETATM 9 C CAU NPZ . . . B 2 47.817 15.908 31.891 1 37.66 ? CAU NPZ 1 A 1 HETATM 10 N NAP NPZ . . . B 2 45.941 14.372 31.934 1 42.51 ? NAP NPZ 1 A 1 HETATM 11 C CAO NPZ . . . B 2 45.614 13.098 31.619 1 40.8 ? CAO NPZ 1 A 1 HETATM 12 C CAG NPZ . . . B 2 44.374 12.469 31.74 1 39.29 ? CAG NPZ 1 A 1 HETATM 13 C CAH NPZ . . . B 2 43.474 12.495 32.822 1 39.38 ? CAH NPZ 1 A 1 HETATM 14 C CAA NPZ . . . B 2 44.038 11.774 30.589 1 39.76 ? CAA NPZ 1 A 1 HETATM 15 C CAB NPZ . . . B 2 42.856 11.073 30.477 1 40.2 ? CAB NPZ 1 A 1 HETATM 16 C CAC NPZ . . . B 2 41.96 11.074 31.511 1 38.51 ? CAC NPZ 1 A 1 HETATM 17 C CAI NPZ . . . B 2 42.258 11.773 32.69 1 38.34 ? CAI NPZ 1 A 1 HETATM 18 C CAD NPZ . . . B 2 40.788 10.353 31.323 1 38.18 ? CAD NPZ 1 A 1 HETATM 19 C CAE NPZ . . . B 2 39.854 10.332 32.354 1 38.57 ? CAE NPZ 1 A 1 HETATM 20 C CAK NPZ . . . B 2 40.117 11.012 33.54 1 36.49 ? CAK NPZ 1 A 1 HETATM 21 C CAJ NPZ . . . B 2 41.307 11.737 33.699 1 38.5 ? CAJ NPZ 1 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 21 #