data_3EQY # _model_server_result.job_id vh3jri4npRSdHhfiYQ3KZQ _model_server_result.datetime_utc '2024-10-12 15:26:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3eqy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":301}' # _entry.id 3EQY # _exptl.entry_id 3EQY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.07 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GUANIDINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3EQY _cell.length_a 75.627 _cell.length_b 75.627 _cell.length_c 35.181 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3EQY _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,K,M 1 1 B,D,H,I,J,L,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 H N N # _chem_comp.formula 'C H5 N3' _chem_comp.formula_weight 59.07 _chem_comp.id GAI _chem_comp.mon_nstd_flag . _chem_comp.name GUANIDINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C N1 GAI doub 83 n n C N2 GAI sing 84 n n C N3 GAI sing 85 n n N1 HN1 GAI sing 86 n n N2 HN21 GAI sing 87 n n N2 HN22 GAI sing 88 n n N3 HN31 GAI sing 89 n n N3 HN32 GAI sing 90 n n # _atom_sites.entry_id 3EQY _atom_sites.fract_transf_matrix[1][1] 0.013223 _atom_sites.fract_transf_matrix[1][2] 0.007634 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015268 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.028424 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 GAI A 1 302 302 GAI GAI . F 4 PO4 A 1 303 303 PO4 PO4 . G 4 PO4 A 1 306 306 PO4 PO4 . H 3 GAI B 1 301 301 GAI GAI . I 4 PO4 B 1 304 304 PO4 PO4 . J 4 PO4 B 1 305 305 PO4 PO4 . K 5 HOH A 1 307 307 HOH HOH . K 5 HOH A 2 308 308 HOH HOH . K 5 HOH A 3 309 309 HOH HOH . K 5 HOH A 4 310 310 HOH HOH . K 5 HOH A 5 311 311 HOH HOH . K 5 HOH A 6 312 312 HOH HOH . K 5 HOH A 7 313 313 HOH HOH . K 5 HOH A 8 314 314 HOH HOH . K 5 HOH A 9 315 315 HOH HOH . K 5 HOH A 10 316 316 HOH HOH . K 5 HOH A 11 317 317 HOH HOH . K 5 HOH A 12 318 318 HOH HOH . K 5 HOH A 13 319 319 HOH HOH . K 5 HOH A 14 320 320 HOH HOH . K 5 HOH A 15 321 321 HOH HOH . K 5 HOH A 16 322 322 HOH HOH . K 5 HOH A 17 323 323 HOH HOH . K 5 HOH A 18 324 324 HOH HOH . K 5 HOH A 19 325 325 HOH HOH . K 5 HOH A 20 326 326 HOH HOH . K 5 HOH A 21 327 327 HOH HOH . K 5 HOH A 22 328 328 HOH HOH . K 5 HOH A 23 329 329 HOH HOH . K 5 HOH A 24 330 330 HOH HOH . K 5 HOH A 25 331 331 HOH HOH . K 5 HOH A 26 332 332 HOH HOH . K 5 HOH A 27 333 333 HOH HOH . K 5 HOH A 28 334 334 HOH HOH . K 5 HOH A 29 335 335 HOH HOH . K 5 HOH A 30 336 336 HOH HOH . K 5 HOH A 31 337 337 HOH HOH . K 5 HOH A 32 338 338 HOH HOH . K 5 HOH A 33 339 339 HOH HOH . K 5 HOH A 34 340 340 HOH HOH . K 5 HOH A 35 341 341 HOH HOH . K 5 HOH A 36 342 342 HOH HOH . K 5 HOH A 37 343 343 HOH HOH . K 5 HOH A 38 344 344 HOH HOH . K 5 HOH A 39 345 345 HOH HOH . K 5 HOH A 40 346 346 HOH HOH . K 5 HOH A 41 347 347 HOH HOH . K 5 HOH A 42 348 348 HOH HOH . K 5 HOH A 43 349 349 HOH HOH . K 5 HOH A 44 350 350 HOH HOH . K 5 HOH A 45 351 351 HOH HOH . K 5 HOH A 46 352 352 HOH HOH . K 5 HOH A 47 353 353 HOH HOH . K 5 HOH A 48 354 354 HOH HOH . K 5 HOH A 49 355 355 HOH HOH . K 5 HOH A 50 356 356 HOH HOH . K 5 HOH A 51 357 357 HOH HOH . K 5 HOH A 52 358 358 HOH HOH . K 5 HOH A 53 359 359 HOH HOH . K 5 HOH A 54 360 360 HOH HOH . K 5 HOH A 55 361 361 HOH HOH . K 5 HOH A 56 362 362 HOH HOH . K 5 HOH A 57 363 363 HOH HOH . K 5 HOH A 58 364 364 HOH HOH . K 5 HOH A 59 365 365 HOH HOH . K 5 HOH A 60 366 366 HOH HOH . K 5 HOH A 61 367 367 HOH HOH . K 5 HOH A 62 368 368 HOH HOH . K 5 HOH A 63 369 369 HOH HOH . K 5 HOH A 64 370 370 HOH HOH . K 5 HOH A 65 371 371 HOH HOH . K 5 HOH A 66 372 372 HOH HOH . K 5 HOH A 67 373 373 HOH HOH . K 5 HOH A 68 374 374 HOH HOH . K 5 HOH A 69 375 375 HOH HOH . K 5 HOH A 70 376 376 HOH HOH . K 5 HOH A 71 377 377 HOH HOH . K 5 HOH A 72 378 378 HOH HOH . K 5 HOH A 73 379 379 HOH HOH . K 5 HOH A 74 380 380 HOH HOH . K 5 HOH A 75 381 381 HOH HOH . K 5 HOH A 76 382 382 HOH HOH . K 5 HOH A 77 383 383 HOH HOH . K 5 HOH A 78 384 384 HOH HOH . K 5 HOH A 79 385 385 HOH HOH . K 5 HOH A 80 386 386 HOH HOH . K 5 HOH A 81 387 387 HOH HOH . K 5 HOH A 82 388 388 HOH HOH . K 5 HOH A 83 389 389 HOH HOH . K 5 HOH A 84 390 390 HOH HOH . K 5 HOH A 85 391 391 HOH HOH . K 5 HOH A 86 392 392 HOH HOH . K 5 HOH A 87 393 393 HOH HOH . K 5 HOH A 88 394 394 HOH HOH . K 5 HOH A 89 395 395 HOH HOH . K 5 HOH A 90 396 396 HOH HOH . K 5 HOH A 91 397 397 HOH HOH . K 5 HOH A 92 398 398 HOH HOH . K 5 HOH A 93 399 399 HOH HOH . K 5 HOH A 94 400 400 HOH HOH . K 5 HOH A 95 401 401 HOH HOH . K 5 HOH A 96 402 28 HOH HOH . K 5 HOH A 97 403 403 HOH HOH . K 5 HOH A 98 404 404 HOH HOH . K 5 HOH A 99 405 405 HOH HOH . K 5 HOH A 100 406 406 HOH HOH . K 5 HOH A 101 407 407 HOH HOH . K 5 HOH A 102 408 408 HOH HOH . K 5 HOH A 103 409 409 HOH HOH . K 5 HOH A 104 410 410 HOH HOH . K 5 HOH A 105 411 411 HOH HOH . K 5 HOH A 106 413 413 HOH HOH . K 5 HOH A 107 414 414 HOH HOH . K 5 HOH A 108 415 415 HOH HOH . K 5 HOH A 109 417 417 HOH HOH . K 5 HOH A 110 461 461 HOH HOH . L 5 HOH B 1 369 369 HOH HOH . L 5 HOH B 2 370 370 HOH HOH . L 5 HOH B 3 371 371 HOH HOH . L 5 HOH B 4 372 372 HOH HOH . L 5 HOH B 5 373 373 HOH HOH . L 5 HOH B 6 374 374 HOH HOH . L 5 HOH B 7 375 375 HOH HOH . L 5 HOH B 8 376 376 HOH HOH . L 5 HOH B 9 377 377 HOH HOH . L 5 HOH B 10 378 378 HOH HOH . L 5 HOH B 11 379 379 HOH HOH . L 5 HOH B 12 380 380 HOH HOH . L 5 HOH B 13 381 381 HOH HOH . L 5 HOH B 14 382 382 HOH HOH . L 5 HOH B 15 383 383 HOH HOH . L 5 HOH B 16 384 384 HOH HOH . L 5 HOH B 17 385 385 HOH HOH . L 5 HOH B 18 386 386 HOH HOH . L 5 HOH B 19 387 387 HOH HOH . L 5 HOH B 20 388 388 HOH HOH . L 5 HOH B 21 389 389 HOH HOH . L 5 HOH B 22 390 390 HOH HOH . L 5 HOH B 23 391 391 HOH HOH . L 5 HOH B 24 392 392 HOH HOH . L 5 HOH B 25 393 393 HOH HOH . L 5 HOH B 26 394 394 HOH HOH . L 5 HOH B 27 395 395 HOH HOH . L 5 HOH B 28 396 396 HOH HOH . L 5 HOH B 29 397 397 HOH HOH . L 5 HOH B 30 398 398 HOH HOH . L 5 HOH B 31 399 399 HOH HOH . L 5 HOH B 32 400 400 HOH HOH . L 5 HOH B 33 401 401 HOH HOH . L 5 HOH B 34 402 402 HOH HOH . L 5 HOH B 35 403 403 HOH HOH . L 5 HOH B 36 404 404 HOH HOH . L 5 HOH B 37 405 405 HOH HOH . L 5 HOH B 38 406 406 HOH HOH . L 5 HOH B 39 407 407 HOH HOH . L 5 HOH B 40 408 408 HOH HOH . L 5 HOH B 41 409 409 HOH HOH . L 5 HOH B 42 410 410 HOH HOH . L 5 HOH B 43 411 411 HOH HOH . L 5 HOH B 44 412 412 HOH HOH . L 5 HOH B 45 413 413 HOH HOH . L 5 HOH B 46 414 414 HOH HOH . L 5 HOH B 47 415 415 HOH HOH . L 5 HOH B 48 417 417 HOH HOH . L 5 HOH B 49 418 418 HOH HOH . L 5 HOH B 50 419 419 HOH HOH . L 5 HOH B 51 420 420 HOH HOH . L 5 HOH B 52 421 421 HOH HOH . L 5 HOH B 53 422 422 HOH HOH . L 5 HOH B 54 423 423 HOH HOH . L 5 HOH B 55 424 424 HOH HOH . L 5 HOH B 56 425 425 HOH HOH . L 5 HOH B 57 426 426 HOH HOH . L 5 HOH B 58 427 427 HOH HOH . L 5 HOH B 59 428 428 HOH HOH . L 5 HOH B 60 429 429 HOH HOH . L 5 HOH B 61 430 430 HOH HOH . L 5 HOH B 62 431 431 HOH HOH . L 5 HOH B 63 432 432 HOH HOH . L 5 HOH B 64 433 433 HOH HOH . L 5 HOH B 65 434 434 HOH HOH . L 5 HOH B 66 435 435 HOH HOH . L 5 HOH B 67 436 436 HOH HOH . L 5 HOH B 68 437 437 HOH HOH . L 5 HOH B 69 438 438 HOH HOH . L 5 HOH B 70 439 439 HOH HOH . L 5 HOH B 71 440 440 HOH HOH . L 5 HOH B 72 441 441 HOH HOH . L 5 HOH B 73 442 442 HOH HOH . L 5 HOH B 74 443 443 HOH HOH . L 5 HOH B 75 444 444 HOH HOH . L 5 HOH B 76 445 445 HOH HOH . L 5 HOH B 77 446 446 HOH HOH . L 5 HOH B 78 447 447 HOH HOH . L 5 HOH B 79 448 448 HOH HOH . L 5 HOH B 80 449 449 HOH HOH . L 5 HOH B 81 450 450 HOH HOH . L 5 HOH B 82 452 452 HOH HOH . L 5 HOH B 83 453 453 HOH HOH . L 5 HOH B 84 454 454 HOH HOH . L 5 HOH B 85 455 455 HOH HOH . L 5 HOH B 86 456 456 HOH HOH . L 5 HOH B 87 457 457 HOH HOH . L 5 HOH B 88 460 460 HOH HOH . L 5 HOH B 89 462 462 HOH HOH . L 5 HOH B 90 463 463 HOH HOH . L 5 HOH B 91 464 464 HOH HOH . L 5 HOH B 92 465 465 HOH HOH . L 5 HOH B 93 466 466 HOH HOH . L 5 HOH B 94 467 467 HOH HOH . L 5 HOH B 95 468 468 HOH HOH . L 5 HOH B 96 470 470 HOH HOH . L 5 HOH B 97 471 471 HOH HOH . L 5 HOH B 98 472 472 HOH HOH . L 5 HOH B 99 473 473 HOH HOH . L 5 HOH B 100 474 474 HOH HOH . L 5 HOH B 101 475 475 HOH HOH . L 5 HOH B 102 476 476 HOH HOH . L 5 HOH B 103 477 477 HOH HOH . L 5 HOH B 104 478 478 HOH HOH . L 5 HOH B 105 479 479 HOH HOH . L 5 HOH B 106 480 480 HOH HOH . L 5 HOH B 107 481 481 HOH HOH . L 5 HOH B 108 482 482 HOH HOH . L 5 HOH B 109 483 483 HOH HOH . M 5 HOH C 1 13 13 HOH HOH . M 5 HOH C 2 14 14 HOH HOH . M 5 HOH C 3 15 15 HOH HOH . M 5 HOH C 4 16 16 HOH HOH . M 5 HOH C 5 17 17 HOH HOH . M 5 HOH C 6 18 18 HOH HOH . M 5 HOH C 7 19 19 HOH HOH . M 5 HOH C 8 20 20 HOH HOH . M 5 HOH C 9 22 22 HOH HOH . M 5 HOH C 10 23 23 HOH HOH . M 5 HOH C 11 24 24 HOH HOH . M 5 HOH C 12 25 25 HOH HOH . M 5 HOH C 13 26 26 HOH HOH . M 5 HOH C 14 27 27 HOH HOH . M 5 HOH C 15 29 29 HOH HOH . M 5 HOH C 16 30 30 HOH HOH . M 5 HOH C 17 31 31 HOH HOH . M 5 HOH C 18 32 32 HOH HOH . M 5 HOH C 19 34 34 HOH HOH . M 5 HOH C 20 418 418 HOH HOH . N 5 HOH D 1 23 23 HOH HOH . N 5 HOH D 2 26 26 HOH HOH . N 5 HOH D 3 30 30 HOH HOH . N 5 HOH D 4 58 58 HOH HOH . N 5 HOH D 5 61 61 HOH HOH . N 5 HOH D 6 66 66 HOH HOH . N 5 HOH D 7 94 94 HOH HOH . N 5 HOH D 8 97 97 HOH HOH . N 5 HOH D 9 100 100 HOH HOH . N 5 HOH D 10 128 128 HOH HOH . N 5 HOH D 11 136 136 HOH HOH . N 5 HOH D 12 140 140 HOH HOH . N 5 HOH D 13 141 141 HOH HOH . N 5 HOH D 14 149 149 HOH HOH . N 5 HOH D 15 151 151 HOH HOH . N 5 HOH D 16 154 154 HOH HOH . N 5 HOH D 17 179 179 HOH HOH . N 5 HOH D 18 181 181 HOH HOH . N 5 HOH D 19 210 210 HOH HOH . N 5 HOH D 20 246 246 HOH HOH . N 5 HOH D 21 267 267 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C GAI . . . H 3 -30.82 53.285 -0.509 1 22.31 ? C GAI 301 B 1 HETATM 2 N N1 GAI . . . H 3 -29.945 52.803 -1.286 1 26.51 ? N1 GAI 301 B 1 HETATM 3 N N2 GAI . . . H 3 -31.733 52.503 0.187 1 21.53 ? N2 GAI 301 B 1 HETATM 4 N N3 GAI . . . H 3 -30.715 54.573 -0.31 1 21.2 ? N3 GAI 301 B 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #