data_3ERD
#
_model_server_result.job_id            jhoqTZFl0KNsMxy8hSdnCw 
_model_server_result.datetime_utc      '2024-11-29 13:55:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3erd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":800}' 
#
_entry.id    3ERD 
#
_exptl.entry_id    3ERD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              268.35 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DIETHYLSTILBESTROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          111.33 
_cell.angle_gamma         90 
_cell.entry_id            3ERD 
_cell.length_a            54.094 
_cell.length_b            82.217 
_cell.length_c            58.041 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3ERD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B SG CYS 124 B CYS 417 1_555 H CH3 ACY . B ACY 717 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.808 ? 
covale ? covale2 B SG CYS 237 B CYS 530 1_555 I CH3 ACY . B ACY 730 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.811 ? 
#
_chem_comp.formula           'C18 H20 O2' 
_chem_comp.formula_weight    268.35 
_chem_comp.id                DES 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DIETHYLSTILBESTROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CP9 CP8 DES sing 90 n n 
CP9 HP91 DES sing 91 n n 
CP9 HP92 DES sing 92 n n 
CP9 HP93 DES sing 93 n n 
CP8 CP7 DES sing 94 n n 
CP8 HP81 DES sing 95 n n 
CP8 HP82 DES sing 96 n n 
CP7 CP6 DES sing 97 n n 
CP7 C7 DES doub 98 e n 
CP6 CP1 DES sing 99 n y 
CP6 CP5 DES doub 100 n y 
CP1 CP2 DES doub 101 n y 
CP1 HP1 DES sing 102 n n 
CP2 CP3 DES sing 103 n y 
CP2 HP2 DES sing 104 n n 
CP3 OP3 DES sing 105 n n 
CP3 CP4 DES doub 106 n y 
OP3 HOP3 DES sing 107 n n 
CP4 CP5 DES sing 108 n y 
CP4 HP4 DES sing 109 n n 
CP5 HP5 DES sing 110 n n 
C7 C6 DES sing 111 n n 
C7 C8 DES sing 112 n n 
C6 C5 DES sing 113 n y 
C6 C1 DES doub 114 n y 
C5 C4 DES doub 115 n y 
C5 H5 DES sing 116 n n 
C4 C3 DES sing 117 n y 
C4 H4 DES sing 118 n n 
C3 O3 DES sing 119 n n 
C3 C2 DES doub 120 n y 
O3 HO3 DES sing 121 n n 
C2 C1 DES sing 122 n y 
C2 H2 DES sing 123 n n 
C1 H1 DES sing 124 n n 
C8 C9 DES sing 125 n n 
C8 H81 DES sing 126 n n 
C8 H82 DES sing 127 n n 
C9 H91 DES sing 128 n n 
C9 H92 DES sing 129 n n 
C9 H93 DES sing 130 n n 
#
_atom_sites.entry_id                     3ERD 
_atom_sites.fract_transf_matrix[1][1]    0.018486 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00722 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012163 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018497 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 CL A 1 601 601 CL CL . 
F 4 DES A 1 600 600 DES DES . 
G 4 DES B 1 800 600 DES DES . 
H 5 ACY B 1 717 717 ACY CBM . 
I 5 ACY B 1 730 730 ACY CBM . 
J 6 HOH A 1 1 1 HOH HOH . 
J 6 HOH A 2 2 2 HOH HOH . 
J 6 HOH A 3 3 3 HOH HOH . 
J 6 HOH A 4 4 4 HOH HOH . 
J 6 HOH A 5 5 5 HOH HOH . 
J 6 HOH A 6 6 6 HOH HOH . 
J 6 HOH A 7 7 7 HOH HOH . 
J 6 HOH A 8 8 8 HOH HOH . 
J 6 HOH A 9 9 9 HOH HOH . 
J 6 HOH A 10 10 10 HOH HOH . 
J 6 HOH A 11 11 11 HOH HOH . 
J 6 HOH A 12 12 12 HOH HOH . 
J 6 HOH A 13 13 13 HOH HOH . 
J 6 HOH A 14 14 14 HOH HOH . 
J 6 HOH A 15 16 16 HOH HOH . 
J 6 HOH A 16 17 17 HOH HOH . 
J 6 HOH A 17 18 18 HOH HOH . 
J 6 HOH A 18 19 19 HOH HOH . 
J 6 HOH A 19 20 20 HOH HOH . 
J 6 HOH A 20 22 22 HOH HOH . 
J 6 HOH A 21 23 23 HOH HOH . 
J 6 HOH A 22 24 24 HOH HOH . 
J 6 HOH A 23 25 25 HOH HOH . 
J 6 HOH A 24 27 27 HOH HOH . 
J 6 HOH A 25 28 28 HOH HOH . 
J 6 HOH A 26 29 29 HOH HOH . 
J 6 HOH A 27 30 30 HOH HOH . 
J 6 HOH A 28 31 31 HOH HOH . 
J 6 HOH A 29 32 32 HOH HOH . 
J 6 HOH A 30 33 33 HOH HOH . 
J 6 HOH A 31 34 34 HOH HOH . 
J 6 HOH A 32 35 35 HOH HOH . 
J 6 HOH A 33 36 36 HOH HOH . 
J 6 HOH A 34 37 37 HOH HOH . 
J 6 HOH A 35 38 38 HOH HOH . 
J 6 HOH A 36 39 39 HOH HOH . 
J 6 HOH A 37 40 40 HOH HOH . 
J 6 HOH A 38 41 41 HOH HOH . 
J 6 HOH A 39 42 42 HOH HOH . 
J 6 HOH A 40 43 43 HOH HOH . 
J 6 HOH A 41 64 64 HOH HOH . 
J 6 HOH A 42 69 69 HOH HOH . 
J 6 HOH A 43 80 80 HOH HOH . 
J 6 HOH A 44 91 91 HOH HOH . 
J 6 HOH A 45 93 93 HOH HOH . 
J 6 HOH A 46 99 99 HOH HOH . 
J 6 HOH A 47 100 100 HOH HOH . 
J 6 HOH A 48 101 101 HOH HOH . 
J 6 HOH A 49 107 107 HOH HOH . 
J 6 HOH A 50 110 110 HOH HOH . 
J 6 HOH A 51 111 111 HOH HOH . 
J 6 HOH A 52 112 112 HOH HOH . 
J 6 HOH A 53 113 113 HOH HOH . 
J 6 HOH A 54 114 114 HOH HOH . 
J 6 HOH A 55 115 115 HOH HOH . 
J 6 HOH A 56 116 116 HOH HOH . 
J 6 HOH A 57 117 117 HOH HOH . 
J 6 HOH A 58 118 118 HOH HOH . 
J 6 HOH A 59 119 119 HOH HOH . 
J 6 HOH A 60 120 120 HOH HOH . 
J 6 HOH A 61 121 121 HOH HOH . 
J 6 HOH A 62 128 128 HOH HOH . 
J 6 HOH A 63 130 130 HOH HOH . 
J 6 HOH A 64 131 131 HOH HOH . 
J 6 HOH A 65 133 133 HOH HOH . 
J 6 HOH A 66 142 142 HOH HOH . 
J 6 HOH A 67 146 146 HOH HOH . 
J 6 HOH A 68 147 147 HOH HOH . 
K 6 HOH B 1 15 15 HOH HOH . 
K 6 HOH B 2 21 21 HOH HOH . 
K 6 HOH B 3 26 26 HOH HOH . 
K 6 HOH B 4 44 44 HOH HOH . 
K 6 HOH B 5 45 45 HOH HOH . 
K 6 HOH B 6 46 46 HOH HOH . 
K 6 HOH B 7 47 47 HOH HOH . 
K 6 HOH B 8 48 48 HOH HOH . 
K 6 HOH B 9 49 49 HOH HOH . 
K 6 HOH B 10 50 50 HOH HOH . 
K 6 HOH B 11 51 51 HOH HOH . 
K 6 HOH B 12 52 52 HOH HOH . 
K 6 HOH B 13 53 53 HOH HOH . 
K 6 HOH B 14 54 54 HOH HOH . 
K 6 HOH B 15 55 55 HOH HOH . 
K 6 HOH B 16 56 56 HOH HOH . 
K 6 HOH B 17 57 57 HOH HOH . 
K 6 HOH B 18 58 58 HOH HOH . 
K 6 HOH B 19 59 59 HOH HOH . 
K 6 HOH B 20 60 60 HOH HOH . 
K 6 HOH B 21 61 61 HOH HOH . 
K 6 HOH B 22 62 62 HOH HOH . 
K 6 HOH B 23 63 63 HOH HOH . 
K 6 HOH B 24 65 65 HOH HOH . 
K 6 HOH B 25 66 66 HOH HOH . 
K 6 HOH B 26 67 67 HOH HOH . 
K 6 HOH B 27 68 68 HOH HOH . 
K 6 HOH B 28 70 70 HOH HOH . 
K 6 HOH B 29 71 71 HOH HOH . 
K 6 HOH B 30 72 72 HOH HOH . 
K 6 HOH B 31 73 73 HOH HOH . 
K 6 HOH B 32 74 74 HOH HOH . 
K 6 HOH B 33 75 75 HOH HOH . 
K 6 HOH B 34 76 76 HOH HOH . 
K 6 HOH B 35 77 77 HOH HOH . 
K 6 HOH B 36 78 78 HOH HOH . 
K 6 HOH B 37 79 79 HOH HOH . 
K 6 HOH B 38 81 81 HOH HOH . 
K 6 HOH B 39 82 82 HOH HOH . 
K 6 HOH B 40 83 83 HOH HOH . 
K 6 HOH B 41 84 84 HOH HOH . 
K 6 HOH B 42 85 85 HOH HOH . 
K 6 HOH B 43 86 86 HOH HOH . 
K 6 HOH B 44 87 87 HOH HOH . 
K 6 HOH B 45 88 88 HOH HOH . 
K 6 HOH B 46 92 92 HOH HOH . 
K 6 HOH B 47 94 94 HOH HOH . 
K 6 HOH B 48 95 95 HOH HOH . 
K 6 HOH B 49 96 96 HOH HOH . 
K 6 HOH B 50 97 97 HOH HOH . 
K 6 HOH B 51 98 98 HOH HOH . 
K 6 HOH B 52 102 102 HOH HOH . 
K 6 HOH B 53 103 103 HOH HOH . 
K 6 HOH B 54 104 104 HOH HOH . 
K 6 HOH B 55 105 105 HOH HOH . 
K 6 HOH B 56 106 106 HOH HOH . 
K 6 HOH B 57 108 108 HOH HOH . 
K 6 HOH B 58 109 109 HOH HOH . 
K 6 HOH B 59 122 122 HOH HOH . 
K 6 HOH B 60 123 123 HOH HOH . 
K 6 HOH B 61 124 124 HOH HOH . 
K 6 HOH B 62 125 125 HOH HOH . 
K 6 HOH B 63 126 126 HOH HOH . 
K 6 HOH B 64 127 127 HOH HOH . 
K 6 HOH B 65 129 129 HOH HOH . 
K 6 HOH B 66 132 132 HOH HOH . 
K 6 HOH B 67 134 134 HOH HOH . 
K 6 HOH B 68 135 135 HOH HOH . 
K 6 HOH B 69 136 136 HOH HOH . 
K 6 HOH B 70 137 137 HOH HOH . 
K 6 HOH B 71 138 138 HOH HOH . 
K 6 HOH B 72 139 139 HOH HOH . 
K 6 HOH B 73 140 140 HOH HOH . 
K 6 HOH B 74 141 141 HOH HOH . 
K 6 HOH B 75 143 143 HOH HOH . 
K 6 HOH B 76 144 144 HOH HOH . 
K 6 HOH B 77 145 145 HOH HOH . 
L 6 HOH D 1 89 89 HOH HOH . 
L 6 HOH D 2 90 90 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CP9 DES . . . G 4 -4.596 -6.054 21.967 1 19.17 ? CP9 DES 800 B 1 
HETATM 2 C CP8 DES . . . G 4 -3.213 -6.336 21.504 1 18.26 ? CP8 DES 800 B 1 
HETATM 3 C CP7 DES . . . G 4 -2.886 -7.829 21.388 1 21.56 ? CP7 DES 800 B 1 
HETATM 4 C CP6 DES . . . G 4 -3.726 -8.545 20.353 1 22.83 ? CP6 DES 800 B 1 
HETATM 5 C CP1 DES . . . G 4 -3.394 -8.496 18.994 1 22.02 ? CP1 DES 800 B 1 
HETATM 6 C CP2 DES . . . G 4 -4.213 -9.107 18.039 1 22.21 ? CP2 DES 800 B 1 
HETATM 7 C CP3 DES . . . G 4 -5.367 -9.775 18.443 1 25.5 ? CP3 DES 800 B 1 
HETATM 8 O OP3 DES . . . G 4 -6.231 -10.361 17.527 1 25.32 ? OP3 DES 800 B 1 
HETATM 9 C CP4 DES . . . G 4 -5.712 -9.841 19.784 1 24.53 ? CP4 DES 800 B 1 
HETATM 10 C CP5 DES . . . G 4 -4.882 -9.225 20.729 1 25.12 ? CP5 DES 800 B 1 
HETATM 11 C C7 DES . . . G 4 -1.993 -8.46 22.125 1 17.69 ? C7 DES 800 B 1 
HETATM 12 C C6 DES . . . G 4 -1.335 -7.832 23.323 1 15.09 ? C6 DES 800 B 1 
HETATM 13 C C5 DES . . . G 4 -2.052 -7.644 24.51 1 17.31 ? C5 DES 800 B 1 
HETATM 14 C C4 DES . . . G 4 -1.447 -7.08 25.638 1 16.47 ? C4 DES 800 B 1 
HETATM 15 C C3 DES . . . G 4 -0.109 -6.684 25.582 1 20.04 ? C3 DES 800 B 1 
HETATM 16 O O3 DES . . . G 4 0.528 -6.111 26.679 1 15.41 ? O3 DES 800 B 1 
HETATM 17 C C2 DES . . . G 4 0.64 -6.86 24.402 1 19.22 ? C2 DES 800 B 1 
HETATM 18 C C1 DES . . . G 4 0.01 -7.429 23.279 1 15.63 ? C1 DES 800 B 1 
HETATM 19 C C8 DES . . . G 4 -1.567 -9.899 21.896 1 18.8 ? C8 DES 800 B 1 
HETATM 20 C C9 DES . . . G 4 -0.393 -10.029 20.974 1 12.45 ? C9 DES 800 B 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    23 
_model_server_stats.query_time_ms           317 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           20 
#