data_3ERE # _model_server_result.job_id mF2e6Bq2xRX10vzTD-lz6A _model_server_result.datetime_utc '2024-11-05 01:26:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ere # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":172}' # _entry.id 3ERE # _exptl.entry_id 3ERE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3ERE _cell.length_a 94.128 _cell.length_b 94.128 _cell.length_c 147.014 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ERE _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA hexameric 6 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I 1 1,2 A,B,C,D,E,F,G,H,I 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 9_555 -x,-x+y,-z -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order hydrog WATSON-CRICK hydrog1 B N3 DT 1 A DT 1 1_555 C N1 DA 16 B DA 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 B O4 DT 1 A DT 1 1_555 C N6 DA 16 B DA 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 B N3 DT 2 A DT 2 1_555 C N1 DA 15 B DA 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 B O4 DT 2 A DT 2 1_555 C N6 DA 15 B DA 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 B N1 DG 3 A DG 3 1_555 C N3 DC 14 B DC 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 B N2 DG 3 A DG 3 1_555 C O2 DC 14 B DC 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 B O6 DG 3 A DG 3 1_555 C N4 DC 14 B DC 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 B N3 DC 4 A DC 4 1_555 C N1 DG 13 B DG 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 B N4 DC 4 A DC 4 1_555 C O6 DG 13 B DG 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 B O2 DC 4 A DC 4 1_555 C N2 DG 13 B DG 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 B N1 DA 5 A DA 5 1_555 C N3 DT 12 B DT 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 B N6 DA 5 A DA 5 1_555 C O4 DT 12 B DT 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 B N3 DT 6 A DT 6 1_555 C N1 DA 11 B DA 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 B O4 DT 6 A DT 6 1_555 C N6 DA 11 B DA 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 B N1 DA 7 A DA 7 1_555 C N3 DT 10 B DT 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 B N6 DA 7 A DA 7 1_555 C O4 DT 10 B DT 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 B N1 DA 8 A DA 8 1_555 C N3 DT 9 B DT 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 B N6 DA 8 A DA 8 1_555 C O4 DT 9 B DT 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 B N3 DC 9 A DC 9 1_555 C N1 DG 8 B DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 B N4 DC 9 A DC 9 1_555 C O6 DG 8 B DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 B O2 DC 9 A DC 9 1_555 C N2 DG 8 B DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 B N1 DG 10 A DG 10 1_555 C N3 DC 7 B DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 B N2 DG 10 A DG 10 1_555 C O2 DC 7 B DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 B O6 DG 10 A DG 10 1_555 C N4 DC 7 B DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 B N1 DA 11 A DA 11 1_555 C N3 DT 6 B DT 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 B N6 DA 11 A DA 11 1_555 C O4 DT 6 B DT 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DT-DA PAIR' hydrog27 B N3 DT 12 A DT 12 1_555 C N1 DA 5 B DA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 B N1 DG 13 A DG 13 1_555 C N3 DC 4 B DC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog29 B N2 DG 13 A DG 13 1_555 C O2 DC 4 B DC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog30 B O6 DG 13 A DG 13 1_555 C N4 DC 4 B DC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog31 B N3 DC 14 A DC 14 1_555 C N1 DG 3 B DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog32 B N4 DC 14 A DC 14 1_555 C O6 DG 3 B DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog33 B O2 DC 14 A DC 14 1_555 C N2 DG 3 B DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog34 B N1 DA 15 A DA 15 1_555 C N3 DT 2 B DT 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog35 B N6 DA 15 A DA 15 1_555 C O4 DT 2 B DT 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog36 B N1 DA 16 A DA 16 1_555 C N3 DT 1 B DT 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog37 B N6 DA 16 A DA 16 1_555 C O4 DT 1 B DT 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 426 n n S O2 SO4 doub 427 n n S O3 SO4 sing 428 n n S O4 SO4 sing 429 n n # _atom_sites.entry_id 3ERE _atom_sites.fract_transf_matrix[1][1] 0.010624 _atom_sites.fract_transf_matrix[1][2] 0.006134 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012267 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006802 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 SO4 D 1 171 1 SO4 SO4 . E 4 SO4 D 1 172 2 SO4 SO4 . F 4 SO4 D 1 173 3 SO4 SO4 . G 5 HOH D 1 174 1 HOH HOH . G 5 HOH D 2 175 2 HOH HOH . G 5 HOH D 3 176 3 HOH HOH . G 5 HOH D 4 177 4 HOH HOH . G 5 HOH D 5 178 6 HOH HOH . G 5 HOH D 6 179 8 HOH HOH . G 5 HOH D 7 180 9 HOH HOH . G 5 HOH D 8 181 10 HOH HOH . G 5 HOH D 9 182 11 HOH HOH . G 5 HOH D 10 183 12 HOH HOH . G 5 HOH D 11 184 14 HOH HOH . G 5 HOH D 12 185 16 HOH HOH . G 5 HOH D 13 186 17 HOH HOH . G 5 HOH D 14 187 19 HOH HOH . G 5 HOH D 15 188 20 HOH HOH . G 5 HOH D 16 189 21 HOH HOH . G 5 HOH D 17 190 22 HOH HOH . G 5 HOH D 18 191 23 HOH HOH . G 5 HOH D 19 192 24 HOH HOH . G 5 HOH D 20 193 25 HOH HOH . G 5 HOH D 21 194 26 HOH HOH . G 5 HOH D 22 195 27 HOH HOH . G 5 HOH D 23 196 28 HOH HOH . G 5 HOH D 24 197 29 HOH HOH . G 5 HOH D 25 198 30 HOH HOH . G 5 HOH D 26 199 31 HOH HOH . G 5 HOH D 27 200 32 HOH HOH . G 5 HOH D 28 201 33 HOH HOH . G 5 HOH D 29 202 34 HOH HOH . G 5 HOH D 30 203 35 HOH HOH . G 5 HOH D 31 204 36 HOH HOH . G 5 HOH D 32 205 37 HOH HOH . G 5 HOH D 33 206 38 HOH HOH . G 5 HOH D 34 207 39 HOH HOH . G 5 HOH D 35 208 41 HOH HOH . G 5 HOH D 36 209 42 HOH HOH . G 5 HOH D 37 210 43 HOH HOH . G 5 HOH D 38 211 44 HOH HOH . G 5 HOH D 39 212 45 HOH HOH . G 5 HOH D 40 213 46 HOH HOH . G 5 HOH D 41 214 47 HOH HOH . G 5 HOH D 42 215 48 HOH HOH . G 5 HOH D 43 216 49 HOH HOH . G 5 HOH D 44 217 50 HOH HOH . G 5 HOH D 45 218 51 HOH HOH . G 5 HOH D 46 219 52 HOH HOH . G 5 HOH D 47 220 53 HOH HOH . G 5 HOH D 48 221 54 HOH HOH . G 5 HOH D 49 222 55 HOH HOH . G 5 HOH D 50 223 56 HOH HOH . G 5 HOH D 51 224 57 HOH HOH . G 5 HOH D 52 225 58 HOH HOH . G 5 HOH D 53 226 59 HOH HOH . G 5 HOH D 54 227 60 HOH HOH . G 5 HOH D 55 228 62 HOH HOH . G 5 HOH D 56 229 63 HOH HOH . G 5 HOH D 57 230 65 HOH HOH . G 5 HOH D 58 231 66 HOH HOH . G 5 HOH D 59 232 67 HOH HOH . G 5 HOH D 60 233 68 HOH HOH . G 5 HOH D 61 234 69 HOH HOH . G 5 HOH D 62 235 70 HOH HOH . G 5 HOH D 63 236 71 HOH HOH . G 5 HOH D 64 237 72 HOH HOH . G 5 HOH D 65 238 73 HOH HOH . G 5 HOH D 66 239 74 HOH HOH . G 5 HOH D 67 240 75 HOH HOH . G 5 HOH D 68 241 76 HOH HOH . G 5 HOH D 69 242 77 HOH HOH . G 5 HOH D 70 243 79 HOH HOH . G 5 HOH D 71 244 84 HOH HOH . G 5 HOH D 72 245 86 HOH HOH . G 5 HOH D 73 246 87 HOH HOH . G 5 HOH D 74 247 88 HOH HOH . G 5 HOH D 75 248 90 HOH HOH . G 5 HOH D 76 249 91 HOH HOH . G 5 HOH D 77 250 92 HOH HOH . G 5 HOH D 78 251 93 HOH HOH . G 5 HOH D 79 252 89 HOH HOH . H 5 HOH A 1 17 7 HOH HOH . H 5 HOH A 2 18 13 HOH HOH . H 5 HOH A 3 19 15 HOH HOH . H 5 HOH A 4 20 61 HOH HOH . H 5 HOH A 5 21 81 HOH HOH . H 5 HOH A 6 22 82 HOH HOH . I 5 HOH B 1 17 5 HOH HOH . I 5 HOH B 2 18 18 HOH HOH . I 5 HOH B 3 19 40 HOH HOH . I 5 HOH B 4 20 64 HOH HOH . I 5 HOH B 5 21 78 HOH HOH . I 5 HOH B 6 22 80 HOH HOH . I 5 HOH B 7 23 83 HOH HOH . I 5 HOH B 8 24 85 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . E 4 -23.55 45.153 3.346 1 81.51 ? S SO4 172 D 1 HETATM 2 O O1 SO4 . . . E 4 -22.462 44.53 4.117 1 84.96 ? O1 SO4 172 D 1 HETATM 3 O O2 SO4 . . . E 4 -23.258 46.588 3.192 1 82.13 ? O2 SO4 172 D 1 HETATM 4 O O3 SO4 . . . E 4 -23.644 44.522 2.016 1 83.06 ? O3 SO4 172 D 1 HETATM 5 O O4 SO4 . . . E 4 -24.823 44.965 4.067 1 82.83 ? O4 SO4 172 D 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #