data_3ERN # _model_server_result.job_id IfSVjYu6pXpfTVQ9ul6L0w _model_server_result.datetime_utc '2024-12-02 11:13:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ern # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":800}' # _entry.id 3ERN # _exptl.entry_id 3ERN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.99 _cell.angle_gamma 90 _cell.entry_id 3ERN _cell.length_a 88.856 _cell.length_b 54.236 _cell.length_c 118.384 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ERN _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,I,J,K,L,M,T,U,V 1 1 D,E,F,N,O,P,Q,R,S,W,X,Y 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 J N N ? 2 N N N ? 2 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 16 A HIS 10 1_555 G ZN ZN . A ZN 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc2 A ND1 HIS 48 A HIS 42 1_555 G ZN ZN . A ZN 800 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc3 B OD2 ASP 14 B ASP 8 1_555 J ZN ZN . B ZN 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc4 B NE2 HIS 16 B HIS 10 1_555 J ZN ZN . B ZN 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc5 D OD2 ASP 14 D ASP 8 1_555 N ZN ZN . D ZN 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? metalc ? metalc6 D NE2 HIS 16 D HIS 10 1_555 N ZN ZN . D ZN 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc7 E OD2 ASP 14 E ASP 8 1_555 Q ZN ZN . E ZN 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3ERN _atom_sites.fract_transf_matrix[1][1] 0.011254 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000982 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018438 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008479 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 ZN A 1 800 800 ZN ZN . H 3 CAR A 1 900 900 CAR CAR . I 3 CAR B 1 900 900 CAR CAR . J 2 ZN B 1 800 800 ZN ZN . K 4 SO4 B 1 801 801 SO4 SO4 . L 5 GPP B 1 901 901 GPP GPP . M 3 CAR C 1 900 900 CAR CAR . N 2 ZN D 1 800 800 ZN ZN . O 3 CAR D 1 900 900 CAR CAR . P 3 CAR E 1 900 900 CAR CAR . Q 2 ZN E 1 800 800 ZN ZN . R 4 SO4 E 1 801 801 SO4 SO4 . S 5 GPP F 1 902 902 GPP GPP . T 6 HOH A 1 901 7 HOH HOH . T 6 HOH A 2 902 16 HOH HOH . T 6 HOH A 3 903 19 HOH HOH . T 6 HOH A 4 904 35 HOH HOH . T 6 HOH A 5 905 47 HOH HOH . T 6 HOH A 6 906 48 HOH HOH . T 6 HOH A 7 907 49 HOH HOH . T 6 HOH A 8 908 50 HOH HOH . T 6 HOH A 9 909 66 HOH HOH . T 6 HOH A 10 910 68 HOH HOH . T 6 HOH A 11 911 69 HOH HOH . T 6 HOH A 12 912 75 HOH HOH . T 6 HOH A 13 913 83 HOH HOH . T 6 HOH A 14 914 97 HOH HOH . T 6 HOH A 15 915 103 HOH HOH . T 6 HOH A 16 916 111 HOH HOH . T 6 HOH A 17 917 116 HOH HOH . T 6 HOH A 18 918 123 HOH HOH . T 6 HOH A 19 919 125 HOH HOH . T 6 HOH A 20 920 138 HOH HOH . T 6 HOH A 21 921 163 HOH HOH . T 6 HOH A 22 922 166 HOH HOH . T 6 HOH A 23 923 176 HOH HOH . T 6 HOH A 24 924 180 HOH HOH . T 6 HOH A 25 925 183 HOH HOH . T 6 HOH A 26 926 214 HOH HOH . T 6 HOH A 27 927 216 HOH HOH . T 6 HOH A 28 928 223 HOH HOH . T 6 HOH A 29 929 225 HOH HOH . T 6 HOH A 30 930 233 HOH HOH . T 6 HOH A 31 931 236 HOH HOH . T 6 HOH A 32 932 237 HOH HOH . T 6 HOH A 33 933 248 HOH HOH . T 6 HOH A 34 934 259 HOH HOH . T 6 HOH A 35 935 261 HOH HOH . T 6 HOH A 36 936 267 HOH HOH . T 6 HOH A 37 937 280 HOH HOH . U 6 HOH B 1 902 3 HOH HOH . U 6 HOH B 2 903 13 HOH HOH . U 6 HOH B 3 904 36 HOH HOH . U 6 HOH B 4 905 53 HOH HOH . U 6 HOH B 5 906 55 HOH HOH . U 6 HOH B 6 907 71 HOH HOH . U 6 HOH B 7 908 77 HOH HOH . U 6 HOH B 8 909 99 HOH HOH . U 6 HOH B 9 910 100 HOH HOH . U 6 HOH B 10 911 101 HOH HOH . U 6 HOH B 11 912 102 HOH HOH . U 6 HOH B 12 913 109 HOH HOH . U 6 HOH B 13 914 110 HOH HOH . U 6 HOH B 14 915 119 HOH HOH . U 6 HOH B 15 916 124 HOH HOH . U 6 HOH B 16 917 134 HOH HOH . U 6 HOH B 17 918 139 HOH HOH . U 6 HOH B 18 919 144 HOH HOH . U 6 HOH B 19 920 153 HOH HOH . U 6 HOH B 20 921 157 HOH HOH . U 6 HOH B 21 922 165 HOH HOH . U 6 HOH B 22 923 171 HOH HOH . U 6 HOH B 23 924 172 HOH HOH . U 6 HOH B 24 925 173 HOH HOH . U 6 HOH B 25 926 178 HOH HOH . U 6 HOH B 26 927 179 HOH HOH . U 6 HOH B 27 928 187 HOH HOH . U 6 HOH B 28 929 188 HOH HOH . U 6 HOH B 29 930 192 HOH HOH . U 6 HOH B 30 931 197 HOH HOH . U 6 HOH B 31 932 198 HOH HOH . U 6 HOH B 32 933 200 HOH HOH . U 6 HOH B 33 934 202 HOH HOH . U 6 HOH B 34 935 203 HOH HOH . U 6 HOH B 35 936 222 HOH HOH . U 6 HOH B 36 937 239 HOH HOH . U 6 HOH B 37 938 246 HOH HOH . U 6 HOH B 38 939 250 HOH HOH . U 6 HOH B 39 940 257 HOH HOH . U 6 HOH B 40 941 264 HOH HOH . U 6 HOH B 41 942 268 HOH HOH . U 6 HOH B 42 943 272 HOH HOH . V 6 HOH C 1 901 1 HOH HOH . V 6 HOH C 2 902 8 HOH HOH . V 6 HOH C 3 903 9 HOH HOH . V 6 HOH C 4 904 12 HOH HOH . V 6 HOH C 5 905 14 HOH HOH . V 6 HOH C 6 906 25 HOH HOH . V 6 HOH C 7 907 29 HOH HOH . V 6 HOH C 8 908 30 HOH HOH . V 6 HOH C 9 909 31 HOH HOH . V 6 HOH C 10 910 32 HOH HOH . V 6 HOH C 11 911 39 HOH HOH . V 6 HOH C 12 912 40 HOH HOH . V 6 HOH C 13 913 45 HOH HOH . V 6 HOH C 14 914 51 HOH HOH . V 6 HOH C 15 915 54 HOH HOH . V 6 HOH C 16 916 58 HOH HOH . V 6 HOH C 17 917 72 HOH HOH . V 6 HOH C 18 918 74 HOH HOH . V 6 HOH C 19 919 81 HOH HOH . V 6 HOH C 20 920 85 HOH HOH . V 6 HOH C 21 921 87 HOH HOH . V 6 HOH C 22 922 90 HOH HOH . V 6 HOH C 23 923 94 HOH HOH . V 6 HOH C 24 924 96 HOH HOH . V 6 HOH C 25 925 113 HOH HOH . V 6 HOH C 26 926 127 HOH HOH . V 6 HOH C 27 927 128 HOH HOH . V 6 HOH C 28 928 131 HOH HOH . V 6 HOH C 29 929 140 HOH HOH . V 6 HOH C 30 930 143 HOH HOH . V 6 HOH C 31 931 146 HOH HOH . V 6 HOH C 32 932 148 HOH HOH . V 6 HOH C 33 933 149 HOH HOH . V 6 HOH C 34 934 150 HOH HOH . V 6 HOH C 35 935 158 HOH HOH . V 6 HOH C 36 936 160 HOH HOH . V 6 HOH C 37 937 168 HOH HOH . V 6 HOH C 38 938 174 HOH HOH . V 6 HOH C 39 939 190 HOH HOH . V 6 HOH C 40 940 201 HOH HOH . V 6 HOH C 41 941 207 HOH HOH . V 6 HOH C 42 942 213 HOH HOH . V 6 HOH C 43 943 219 HOH HOH . V 6 HOH C 44 944 221 HOH HOH . V 6 HOH C 45 945 226 HOH HOH . V 6 HOH C 46 946 247 HOH HOH . V 6 HOH C 47 947 249 HOH HOH . V 6 HOH C 48 948 252 HOH HOH . V 6 HOH C 49 949 256 HOH HOH . V 6 HOH C 50 950 266 HOH HOH . V 6 HOH C 51 951 270 HOH HOH . W 6 HOH D 1 901 2 HOH HOH . W 6 HOH D 2 902 4 HOH HOH . W 6 HOH D 3 903 10 HOH HOH . W 6 HOH D 4 904 21 HOH HOH . W 6 HOH D 5 905 22 HOH HOH . W 6 HOH D 6 906 23 HOH HOH . W 6 HOH D 7 907 27 HOH HOH . W 6 HOH D 8 908 34 HOH HOH . W 6 HOH D 9 909 41 HOH HOH . W 6 HOH D 10 910 42 HOH HOH . W 6 HOH D 11 911 59 HOH HOH . W 6 HOH D 12 912 67 HOH HOH . W 6 HOH D 13 913 73 HOH HOH . W 6 HOH D 14 914 76 HOH HOH . W 6 HOH D 15 915 82 HOH HOH . W 6 HOH D 16 916 86 HOH HOH . W 6 HOH D 17 917 88 HOH HOH . W 6 HOH D 18 918 106 HOH HOH . W 6 HOH D 19 919 107 HOH HOH . W 6 HOH D 20 920 108 HOH HOH . W 6 HOH D 21 921 112 HOH HOH . W 6 HOH D 22 922 115 HOH HOH . W 6 HOH D 23 923 120 HOH HOH . W 6 HOH D 24 924 129 HOH HOH . W 6 HOH D 25 925 132 HOH HOH . W 6 HOH D 26 926 133 HOH HOH . W 6 HOH D 27 927 141 HOH HOH . W 6 HOH D 28 928 142 HOH HOH . W 6 HOH D 29 929 145 HOH HOH . W 6 HOH D 30 930 155 HOH HOH . W 6 HOH D 31 931 159 HOH HOH . W 6 HOH D 32 932 162 HOH HOH . W 6 HOH D 33 933 170 HOH HOH . W 6 HOH D 34 934 182 HOH HOH . W 6 HOH D 35 935 184 HOH HOH . W 6 HOH D 36 936 186 HOH HOH . W 6 HOH D 37 937 193 HOH HOH . W 6 HOH D 38 938 195 HOH HOH . W 6 HOH D 39 939 196 HOH HOH . W 6 HOH D 40 940 204 HOH HOH . W 6 HOH D 41 941 205 HOH HOH . W 6 HOH D 42 942 206 HOH HOH . W 6 HOH D 43 943 208 HOH HOH . W 6 HOH D 44 944 218 HOH HOH . W 6 HOH D 45 945 224 HOH HOH . W 6 HOH D 46 946 229 HOH HOH . W 6 HOH D 47 947 230 HOH HOH . W 6 HOH D 48 948 231 HOH HOH . W 6 HOH D 49 949 232 HOH HOH . W 6 HOH D 50 950 238 HOH HOH . W 6 HOH D 51 951 240 HOH HOH . W 6 HOH D 52 952 241 HOH HOH . W 6 HOH D 53 953 242 HOH HOH . W 6 HOH D 54 954 255 HOH HOH . W 6 HOH D 55 955 263 HOH HOH . W 6 HOH D 56 956 265 HOH HOH . W 6 HOH D 57 957 269 HOH HOH . W 6 HOH D 58 958 279 HOH HOH . W 6 HOH D 59 959 282 HOH HOH . X 6 HOH E 1 901 5 HOH HOH . X 6 HOH E 2 902 24 HOH HOH . X 6 HOH E 3 903 28 HOH HOH . X 6 HOH E 4 904 38 HOH HOH . X 6 HOH E 5 905 46 HOH HOH . X 6 HOH E 6 906 52 HOH HOH . X 6 HOH E 7 907 57 HOH HOH . X 6 HOH E 8 908 78 HOH HOH . X 6 HOH E 9 909 79 HOH HOH . X 6 HOH E 10 910 80 HOH HOH . X 6 HOH E 11 911 84 HOH HOH . X 6 HOH E 12 912 89 HOH HOH . X 6 HOH E 13 913 91 HOH HOH . X 6 HOH E 14 914 92 HOH HOH . X 6 HOH E 15 915 98 HOH HOH . X 6 HOH E 16 916 104 HOH HOH . X 6 HOH E 17 917 105 HOH HOH . X 6 HOH E 18 918 117 HOH HOH . X 6 HOH E 19 919 130 HOH HOH . X 6 HOH E 20 920 136 HOH HOH . X 6 HOH E 21 921 154 HOH HOH . X 6 HOH E 22 922 156 HOH HOH . X 6 HOH E 23 923 161 HOH HOH . X 6 HOH E 24 924 169 HOH HOH . X 6 HOH E 25 925 175 HOH HOH . X 6 HOH E 26 926 181 HOH HOH . X 6 HOH E 27 927 189 HOH HOH . X 6 HOH E 28 928 191 HOH HOH . X 6 HOH E 29 929 194 HOH HOH . X 6 HOH E 30 930 209 HOH HOH . X 6 HOH E 31 931 211 HOH HOH . X 6 HOH E 32 932 212 HOH HOH . X 6 HOH E 33 933 220 HOH HOH . X 6 HOH E 34 934 228 HOH HOH . X 6 HOH E 35 935 235 HOH HOH . X 6 HOH E 36 936 244 HOH HOH . X 6 HOH E 37 937 253 HOH HOH . X 6 HOH E 38 938 254 HOH HOH . X 6 HOH E 39 939 260 HOH HOH . X 6 HOH E 40 940 262 HOH HOH . X 6 HOH E 41 941 271 HOH HOH . X 6 HOH E 42 942 273 HOH HOH . X 6 HOH E 43 943 274 HOH HOH . X 6 HOH E 44 944 276 HOH HOH . X 6 HOH E 45 945 277 HOH HOH . X 6 HOH E 46 946 278 HOH HOH . X 6 HOH E 47 947 283 HOH HOH . X 6 HOH E 48 948 284 HOH HOH . Y 6 HOH F 1 903 6 HOH HOH . Y 6 HOH F 2 904 11 HOH HOH . Y 6 HOH F 3 905 15 HOH HOH . Y 6 HOH F 4 906 17 HOH HOH . Y 6 HOH F 5 907 18 HOH HOH . Y 6 HOH F 6 908 20 HOH HOH . Y 6 HOH F 7 909 26 HOH HOH . Y 6 HOH F 8 910 33 HOH HOH . Y 6 HOH F 9 911 37 HOH HOH . Y 6 HOH F 10 912 43 HOH HOH . Y 6 HOH F 11 913 44 HOH HOH . Y 6 HOH F 12 914 56 HOH HOH . Y 6 HOH F 13 915 60 HOH HOH . Y 6 HOH F 14 916 61 HOH HOH . Y 6 HOH F 15 917 62 HOH HOH . Y 6 HOH F 16 918 63 HOH HOH . Y 6 HOH F 17 919 64 HOH HOH . Y 6 HOH F 18 920 65 HOH HOH . Y 6 HOH F 19 921 70 HOH HOH . Y 6 HOH F 20 922 93 HOH HOH . Y 6 HOH F 21 923 95 HOH HOH . Y 6 HOH F 22 924 114 HOH HOH . Y 6 HOH F 23 925 118 HOH HOH . Y 6 HOH F 24 926 121 HOH HOH . Y 6 HOH F 25 927 122 HOH HOH . Y 6 HOH F 26 928 126 HOH HOH . Y 6 HOH F 27 929 135 HOH HOH . Y 6 HOH F 28 930 137 HOH HOH . Y 6 HOH F 29 931 147 HOH HOH . Y 6 HOH F 30 932 151 HOH HOH . Y 6 HOH F 31 933 152 HOH HOH . Y 6 HOH F 32 934 164 HOH HOH . Y 6 HOH F 33 935 167 HOH HOH . Y 6 HOH F 34 936 177 HOH HOH . Y 6 HOH F 35 937 185 HOH HOH . Y 6 HOH F 36 938 199 HOH HOH . Y 6 HOH F 37 939 210 HOH HOH . Y 6 HOH F 38 940 215 HOH HOH . Y 6 HOH F 39 941 217 HOH HOH . Y 6 HOH F 40 942 227 HOH HOH . Y 6 HOH F 41 943 234 HOH HOH . Y 6 HOH F 42 944 243 HOH HOH . Y 6 HOH F 43 945 245 HOH HOH . Y 6 HOH F 44 946 251 HOH HOH . Y 6 HOH F 45 947 258 HOH HOH . Y 6 HOH F 46 948 275 HOH HOH . Y 6 HOH F 47 949 281 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 2 _atom_site.Cartn_x 74.587 _atom_site.Cartn_y -48.507 _atom_site.Cartn_z 45.606 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 90.95 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 800 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 44 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 258 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #