data_3ESX # _model_server_result.job_id 6lPMlMa2bngdpXmd-K7j9Q _model_server_result.datetime_utc '2024-10-14 12:25:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3esx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":172}' # _entry.id 3ESX # _exptl.entry_id 3ESX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.07 _cell.angle_gamma 90 _cell.entry_id 3ESX _cell.length_a 37.597 _cell.length_b 104.142 _cell.length_c 37.8 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ESX _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,I 1 1 B,E,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D CA CA . A CA 171 1_555 I O HOH . A HOH 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.626 ? metalc ? metalc2 D CA CA . A CA 171 1_555 I O HOH . A HOH 192 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.901 ? metalc ? metalc3 D CA CA . A CA 171 1_555 I O HOH . A HOH 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc4 D CA CA . A CA 171 1_555 I O HOH . A HOH 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc5 B O THR 42 B THR 42 1_555 F CA CA . B CA 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc6 B OD1 ASN 45 B ASN 45 1_555 F CA CA . B CA 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? metalc ? metalc7 B OD1 ASP 46 B ASP 46 1_555 F CA CA . B CA 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc8 B O TYR 125 B TYR 125 1_555 G CA CA . B CA 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.554 ? metalc ? metalc9 F CA CA . B CA 171 1_555 J O HOH . B HOH 348 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? metalc ? metalc10 G CA CA . B CA 172 1_555 J O HOH . B HOH 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.571 ? metalc ? metalc11 G CA CA . B CA 172 1_555 J O HOH . B HOH 327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3ESX _atom_sites.fract_transf_matrix[1][1] 0.026598 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001427 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009602 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026493 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FMN A 1 170 170 FMN FMN . D 3 CA A 1 171 1 CA CA . E 2 FMN B 1 170 170 FMN FMN . F 3 CA B 1 171 1 CA CA . G 3 CA B 1 172 1 CA CA . H 4 CL B 1 173 1 CL CL . I 5 HOH A 1 172 170 HOH HOH . I 5 HOH A 2 173 174 HOH HOH . I 5 HOH A 3 174 175 HOH HOH . I 5 HOH A 4 175 176 HOH HOH . I 5 HOH A 5 176 177 HOH HOH . I 5 HOH A 6 177 178 HOH HOH . I 5 HOH A 7 178 179 HOH HOH . I 5 HOH A 8 179 181 HOH HOH . I 5 HOH A 9 180 183 HOH HOH . I 5 HOH A 10 181 184 HOH HOH . I 5 HOH A 11 182 188 HOH HOH . I 5 HOH A 12 183 189 HOH HOH . I 5 HOH A 13 184 192 HOH HOH . I 5 HOH A 14 185 201 HOH HOH . I 5 HOH A 15 186 203 HOH HOH . I 5 HOH A 16 187 206 HOH HOH . I 5 HOH A 17 188 207 HOH HOH . I 5 HOH A 18 189 208 HOH HOH . I 5 HOH A 19 190 209 HOH HOH . I 5 HOH A 20 191 215 HOH HOH . I 5 HOH A 21 192 216 HOH HOH . I 5 HOH A 22 193 217 HOH HOH . I 5 HOH A 23 194 219 HOH HOH . I 5 HOH A 24 195 220 HOH HOH . I 5 HOH A 25 196 293 HOH HOH . I 5 HOH A 26 197 224 HOH HOH . I 5 HOH A 27 198 225 HOH HOH . I 5 HOH A 28 199 226 HOH HOH . I 5 HOH A 29 200 228 HOH HOH . I 5 HOH A 30 201 230 HOH HOH . I 5 HOH A 31 202 233 HOH HOH . I 5 HOH A 32 203 234 HOH HOH . I 5 HOH A 33 204 236 HOH HOH . I 5 HOH A 34 205 237 HOH HOH . I 5 HOH A 35 206 238 HOH HOH . I 5 HOH A 36 207 239 HOH HOH . I 5 HOH A 37 208 5 HOH HOH . I 5 HOH A 38 209 8 HOH HOH . I 5 HOH A 39 210 9 HOH HOH . I 5 HOH A 40 211 12 HOH HOH . I 5 HOH A 41 212 13 HOH HOH . I 5 HOH A 42 213 15 HOH HOH . I 5 HOH A 43 214 17 HOH HOH . I 5 HOH A 44 215 19 HOH HOH . I 5 HOH A 45 216 20 HOH HOH . I 5 HOH A 46 217 21 HOH HOH . I 5 HOH A 47 218 22 HOH HOH . I 5 HOH A 48 219 25 HOH HOH . I 5 HOH A 49 220 26 HOH HOH . I 5 HOH A 50 221 29 HOH HOH . I 5 HOH A 51 222 32 HOH HOH . I 5 HOH A 52 223 36 HOH HOH . I 5 HOH A 53 224 37 HOH HOH . I 5 HOH A 54 225 38 HOH HOH . I 5 HOH A 55 226 42 HOH HOH . I 5 HOH A 56 227 44 HOH HOH . I 5 HOH A 57 228 46 HOH HOH . I 5 HOH A 58 229 47 HOH HOH . I 5 HOH A 59 230 49 HOH HOH . I 5 HOH A 60 231 51 HOH HOH . I 5 HOH A 61 232 53 HOH HOH . I 5 HOH A 62 233 54 HOH HOH . I 5 HOH A 63 234 55 HOH HOH . I 5 HOH A 64 235 56 HOH HOH . I 5 HOH A 65 236 58 HOH HOH . I 5 HOH A 66 237 62 HOH HOH . I 5 HOH A 67 238 63 HOH HOH . I 5 HOH A 68 239 64 HOH HOH . I 5 HOH A 69 240 65 HOH HOH . I 5 HOH A 70 241 66 HOH HOH . I 5 HOH A 71 242 67 HOH HOH . I 5 HOH A 72 243 70 HOH HOH . I 5 HOH A 73 244 71 HOH HOH . I 5 HOH A 74 245 75 HOH HOH . I 5 HOH A 75 246 77 HOH HOH . I 5 HOH A 76 247 80 HOH HOH . I 5 HOH A 77 248 83 HOH HOH . I 5 HOH A 78 249 85 HOH HOH . I 5 HOH A 79 250 86 HOH HOH . I 5 HOH A 80 251 88 HOH HOH . I 5 HOH A 81 252 90 HOH HOH . I 5 HOH A 82 253 91 HOH HOH . I 5 HOH A 83 254 92 HOH HOH . I 5 HOH A 84 255 95 HOH HOH . I 5 HOH A 85 256 101 HOH HOH . I 5 HOH A 86 257 107 HOH HOH . I 5 HOH A 87 258 109 HOH HOH . I 5 HOH A 88 259 112 HOH HOH . I 5 HOH A 89 260 113 HOH HOH . I 5 HOH A 90 261 114 HOH HOH . I 5 HOH A 91 262 117 HOH HOH . I 5 HOH A 92 263 118 HOH HOH . I 5 HOH A 93 264 120 HOH HOH . I 5 HOH A 94 265 121 HOH HOH . I 5 HOH A 95 266 124 HOH HOH . I 5 HOH A 96 267 125 HOH HOH . I 5 HOH A 97 268 128 HOH HOH . I 5 HOH A 98 269 130 HOH HOH . I 5 HOH A 99 270 131 HOH HOH . I 5 HOH A 100 271 132 HOH HOH . I 5 HOH A 101 272 135 HOH HOH . I 5 HOH A 102 273 136 HOH HOH . I 5 HOH A 103 274 141 HOH HOH . I 5 HOH A 104 275 145 HOH HOH . I 5 HOH A 105 276 146 HOH HOH . I 5 HOH A 106 277 148 HOH HOH . I 5 HOH A 107 278 149 HOH HOH . I 5 HOH A 108 279 153 HOH HOH . I 5 HOH A 109 280 159 HOH HOH . I 5 HOH A 110 281 162 HOH HOH . I 5 HOH A 111 282 163 HOH HOH . I 5 HOH A 112 283 165 HOH HOH . I 5 HOH A 113 284 168 HOH HOH . J 5 HOH B 1 174 2 HOH HOH . J 5 HOH B 2 175 3 HOH HOH . J 5 HOH B 3 176 4 HOH HOH . J 5 HOH B 4 178 6 HOH HOH . J 5 HOH B 5 179 7 HOH HOH . J 5 HOH B 6 182 10 HOH HOH . J 5 HOH B 7 183 11 HOH HOH . J 5 HOH B 8 186 14 HOH HOH . J 5 HOH B 9 188 16 HOH HOH . J 5 HOH B 10 190 18 HOH HOH . J 5 HOH B 11 195 23 HOH HOH . J 5 HOH B 12 196 24 HOH HOH . J 5 HOH B 13 199 27 HOH HOH . J 5 HOH B 14 200 28 HOH HOH . J 5 HOH B 15 202 30 HOH HOH . J 5 HOH B 16 203 31 HOH HOH . J 5 HOH B 17 205 33 HOH HOH . J 5 HOH B 18 206 34 HOH HOH . J 5 HOH B 19 207 35 HOH HOH . J 5 HOH B 20 211 39 HOH HOH . J 5 HOH B 21 212 40 HOH HOH . J 5 HOH B 22 213 41 HOH HOH . J 5 HOH B 23 215 43 HOH HOH . J 5 HOH B 24 217 45 HOH HOH . J 5 HOH B 25 220 48 HOH HOH . J 5 HOH B 26 223 52 HOH HOH . J 5 HOH B 27 228 57 HOH HOH . J 5 HOH B 28 230 59 HOH HOH . J 5 HOH B 29 231 60 HOH HOH . J 5 HOH B 30 232 61 HOH HOH . J 5 HOH B 31 239 68 HOH HOH . J 5 HOH B 32 240 69 HOH HOH . J 5 HOH B 33 243 72 HOH HOH . J 5 HOH B 34 244 73 HOH HOH . J 5 HOH B 35 245 74 HOH HOH . J 5 HOH B 36 247 76 HOH HOH . J 5 HOH B 37 249 78 HOH HOH . J 5 HOH B 38 250 79 HOH HOH . J 5 HOH B 39 252 81 HOH HOH . J 5 HOH B 40 253 82 HOH HOH . J 5 HOH B 41 255 84 HOH HOH . J 5 HOH B 42 258 87 HOH HOH . J 5 HOH B 43 260 89 HOH HOH . J 5 HOH B 44 264 93 HOH HOH . J 5 HOH B 45 265 94 HOH HOH . J 5 HOH B 46 267 96 HOH HOH . J 5 HOH B 47 268 97 HOH HOH . J 5 HOH B 48 269 98 HOH HOH . J 5 HOH B 49 270 99 HOH HOH . J 5 HOH B 50 271 100 HOH HOH . J 5 HOH B 51 273 102 HOH HOH . J 5 HOH B 52 274 103 HOH HOH . J 5 HOH B 53 275 105 HOH HOH . J 5 HOH B 54 276 106 HOH HOH . J 5 HOH B 55 278 108 HOH HOH . J 5 HOH B 56 280 110 HOH HOH . J 5 HOH B 57 281 111 HOH HOH . J 5 HOH B 58 285 115 HOH HOH . J 5 HOH B 59 286 116 HOH HOH . J 5 HOH B 60 289 119 HOH HOH . J 5 HOH B 61 292 122 HOH HOH . J 5 HOH B 62 293 123 HOH HOH . J 5 HOH B 63 296 126 HOH HOH . J 5 HOH B 64 298 129 HOH HOH . J 5 HOH B 65 302 133 HOH HOH . J 5 HOH B 66 303 134 HOH HOH . J 5 HOH B 67 306 137 HOH HOH . J 5 HOH B 68 307 138 HOH HOH . J 5 HOH B 69 308 139 HOH HOH . J 5 HOH B 70 309 140 HOH HOH . J 5 HOH B 71 311 144 HOH HOH . J 5 HOH B 72 314 147 HOH HOH . J 5 HOH B 73 317 150 HOH HOH . J 5 HOH B 74 318 151 HOH HOH . J 5 HOH B 75 319 152 HOH HOH . J 5 HOH B 76 321 154 HOH HOH . J 5 HOH B 77 322 155 HOH HOH . J 5 HOH B 78 323 156 HOH HOH . J 5 HOH B 79 324 157 HOH HOH . J 5 HOH B 80 325 158 HOH HOH . J 5 HOH B 81 327 160 HOH HOH . J 5 HOH B 82 328 161 HOH HOH . J 5 HOH B 83 331 164 HOH HOH . J 5 HOH B 84 333 166 HOH HOH . J 5 HOH B 85 334 167 HOH HOH . J 5 HOH B 86 336 171 HOH HOH . J 5 HOH B 87 337 172 HOH HOH . J 5 HOH B 88 338 173 HOH HOH . J 5 HOH B 89 339 180 HOH HOH . J 5 HOH B 90 340 182 HOH HOH . J 5 HOH B 91 341 185 HOH HOH . J 5 HOH B 92 342 186 HOH HOH . J 5 HOH B 93 343 187 HOH HOH . J 5 HOH B 94 344 190 HOH HOH . J 5 HOH B 95 345 191 HOH HOH . J 5 HOH B 96 346 193 HOH HOH . J 5 HOH B 97 347 194 HOH HOH . J 5 HOH B 98 348 195 HOH HOH . J 5 HOH B 99 349 196 HOH HOH . J 5 HOH B 100 350 197 HOH HOH . J 5 HOH B 101 351 198 HOH HOH . J 5 HOH B 102 352 199 HOH HOH . J 5 HOH B 103 353 200 HOH HOH . J 5 HOH B 104 354 202 HOH HOH . J 5 HOH B 105 355 204 HOH HOH . J 5 HOH B 106 356 205 HOH HOH . J 5 HOH B 107 357 210 HOH HOH . J 5 HOH B 108 358 212 HOH HOH . J 5 HOH B 109 359 213 HOH HOH . J 5 HOH B 110 360 214 HOH HOH . J 5 HOH B 111 361 218 HOH HOH . J 5 HOH B 112 362 221 HOH HOH . J 5 HOH B 113 363 222 HOH HOH . J 5 HOH B 114 364 227 HOH HOH . J 5 HOH B 115 365 229 HOH HOH . J 5 HOH B 116 366 231 HOH HOH . J 5 HOH B 117 367 232 HOH HOH . J 5 HOH B 118 368 235 HOH HOH . J 5 HOH B 119 369 240 HOH HOH . J 5 HOH B 120 370 241 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 3 _atom_site.Cartn_x 14.103 _atom_site.Cartn_y 25.736 _atom_site.Cartn_z 5.124 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 24.46 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 172 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #