data_3ET0 # _model_server_result.job_id VRGxVEdADJjzEwkJEZQwPA _model_server_result.datetime_utc '2024-12-22 07:49:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3et0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":2}' # _entry.id 3ET0 # _exptl.entry_id 3ET0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description alpha-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.73 _cell.angle_gamma 90 _cell.entry_id 3ET0 _cell.length_a 93.349 _cell.length_b 62.451 _cell.length_c 119.242 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ET0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 99 A GLY 284 1_555 A N CME 100 A CME 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale2 A C CME 100 A CME 285 1_555 A N GLN 101 A GLN 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 B C GLY 99 B GLY 284 1_555 B N CME 100 B CME 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 B C CME 100 B CME 285 1_555 B N GLN 101 B GLN 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id GLC _chem_comp.mon_nstd_flag . _chem_comp.name alpha-D-glucopyranose _chem_comp.type 'd-saccharide, alpha linking' _chem_comp.pdbx_synonyms alpha-D-glucose;D-glucose;glucose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 GLC sing 121 n n C1 O1 GLC sing 122 n n C1 O5 GLC sing 123 n n C1 H1 GLC sing 124 n n C2 C3 GLC sing 125 n n C2 O2 GLC sing 126 n n C2 H2 GLC sing 127 n n C3 C4 GLC sing 128 n n C3 O3 GLC sing 129 n n C3 H3 GLC sing 130 n n C4 C5 GLC sing 131 n n C4 O4 GLC sing 132 n n C4 H4 GLC sing 133 n n C5 C6 GLC sing 134 n n C5 O5 GLC sing 135 n n C5 H5 GLC sing 136 n n C6 O6 GLC sing 137 n n C6 H61 GLC sing 138 n n C6 H62 GLC sing 139 n n O1 HO1 GLC sing 140 n n O2 HO2 GLC sing 141 n n O3 HO3 GLC sing 142 n n O4 HO4 GLC sing 143 n n O6 HO6 GLC sing 144 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version GLC DGlcpa 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 GLC a-D-glucopyranose 'COMMON NAME' GMML 1 GLC a-D-Glcp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 GLC Glc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 3ET0 _atom_sites.fract_transf_matrix[1][1] 0.010712 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002224 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016013 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008565 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ET0 A 1 1 1 ET0 LIG . D 3 GLC B 1 2 2 GLC GLC . E 4 HOH A 1 478 1 HOH HOH . E 4 HOH A 2 479 4 HOH HOH . E 4 HOH A 3 480 8 HOH HOH . E 4 HOH A 4 481 10 HOH HOH . E 4 HOH A 5 482 13 HOH HOH . E 4 HOH A 6 483 15 HOH HOH . E 4 HOH A 7 484 18 HOH HOH . E 4 HOH A 8 485 19 HOH HOH . E 4 HOH A 9 486 23 HOH HOH . E 4 HOH A 10 487 25 HOH HOH . E 4 HOH A 11 488 26 HOH HOH . E 4 HOH A 12 489 28 HOH HOH . E 4 HOH A 13 490 29 HOH HOH . E 4 HOH A 14 491 35 HOH HOH . E 4 HOH A 15 492 36 HOH HOH . E 4 HOH A 16 493 41 HOH HOH . E 4 HOH A 17 494 42 HOH HOH . E 4 HOH A 18 495 43 HOH HOH . E 4 HOH A 19 496 45 HOH HOH . E 4 HOH A 20 497 47 HOH HOH . E 4 HOH A 21 498 48 HOH HOH . E 4 HOH A 22 499 49 HOH HOH . E 4 HOH A 23 500 50 HOH HOH . E 4 HOH A 24 501 51 HOH HOH . E 4 HOH A 25 502 52 HOH HOH . E 4 HOH A 26 503 53 HOH HOH . E 4 HOH A 27 504 55 HOH HOH . E 4 HOH A 28 505 56 HOH HOH . E 4 HOH A 29 506 58 HOH HOH . E 4 HOH A 30 507 59 HOH HOH . E 4 HOH A 31 508 60 HOH HOH . E 4 HOH A 32 509 61 HOH HOH . E 4 HOH A 33 510 63 HOH HOH . E 4 HOH A 34 511 65 HOH HOH . E 4 HOH A 35 512 67 HOH HOH . E 4 HOH A 36 513 68 HOH HOH . E 4 HOH A 37 514 69 HOH HOH . E 4 HOH A 38 515 71 HOH HOH . E 4 HOH A 39 516 72 HOH HOH . E 4 HOH A 40 518 76 HOH HOH . E 4 HOH A 41 519 77 HOH HOH . E 4 HOH A 42 521 82 HOH HOH . E 4 HOH A 43 522 83 HOH HOH . E 4 HOH A 44 523 84 HOH HOH . E 4 HOH A 45 524 86 HOH HOH . E 4 HOH A 46 525 87 HOH HOH . E 4 HOH A 47 526 88 HOH HOH . E 4 HOH A 48 527 90 HOH HOH . E 4 HOH A 49 529 92 HOH HOH . E 4 HOH A 50 530 93 HOH HOH . E 4 HOH A 51 531 94 HOH HOH . E 4 HOH A 52 532 95 HOH HOH . F 4 HOH B 1 517 75 HOH HOH . F 4 HOH B 2 518 80 HOH HOH . F 4 HOH B 3 519 91 HOH HOH . F 4 HOH B 4 520 2 HOH HOH . F 4 HOH B 5 521 3 HOH HOH . F 4 HOH B 6 522 5 HOH HOH . F 4 HOH B 7 523 6 HOH HOH . F 4 HOH B 8 524 7 HOH HOH . F 4 HOH B 9 525 9 HOH HOH . F 4 HOH B 10 526 11 HOH HOH . F 4 HOH B 11 527 12 HOH HOH . F 4 HOH B 12 528 14 HOH HOH . F 4 HOH B 13 529 16 HOH HOH . F 4 HOH B 14 530 17 HOH HOH . F 4 HOH B 15 531 20 HOH HOH . F 4 HOH B 16 532 21 HOH HOH . F 4 HOH B 17 533 22 HOH HOH . F 4 HOH B 18 534 24 HOH HOH . F 4 HOH B 19 535 27 HOH HOH . F 4 HOH B 20 536 30 HOH HOH . F 4 HOH B 21 537 31 HOH HOH . F 4 HOH B 22 538 32 HOH HOH . F 4 HOH B 23 539 33 HOH HOH . F 4 HOH B 24 540 34 HOH HOH . F 4 HOH B 25 541 37 HOH HOH . F 4 HOH B 26 542 38 HOH HOH . F 4 HOH B 27 543 39 HOH HOH . F 4 HOH B 28 544 40 HOH HOH . F 4 HOH B 29 545 44 HOH HOH . F 4 HOH B 30 546 46 HOH HOH . F 4 HOH B 31 547 54 HOH HOH . F 4 HOH B 32 548 57 HOH HOH . F 4 HOH B 33 549 62 HOH HOH . F 4 HOH B 34 550 64 HOH HOH . F 4 HOH B 35 551 66 HOH HOH . F 4 HOH B 36 552 70 HOH HOH . F 4 HOH B 37 553 73 HOH HOH . F 4 HOH B 38 554 74 HOH HOH . F 4 HOH B 39 555 78 HOH HOH . F 4 HOH B 40 556 79 HOH HOH . F 4 HOH B 41 557 81 HOH HOH . F 4 HOH B 42 558 85 HOH HOH . F 4 HOH B 43 559 89 HOH HOH . F 4 HOH B 44 560 96 HOH HOH . F 4 HOH B 45 561 97 HOH HOH . F 4 HOH B 46 562 98 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GLC . . . D 3 39.668 34.192 42.496 1 86.11 ? C1 GLC 2 B 1 HETATM 2 C C2 GLC . . . D 3 39.67 35.754 42.633 1 75.81 ? C2 GLC 2 B 1 HETATM 3 C C3 GLC . . . D 3 38.296 36.368 42.987 1 79.39 ? C3 GLC 2 B 1 HETATM 4 C C4 GLC . . . D 3 37.319 35.713 41.978 1 79.45 ? C4 GLC 2 B 1 HETATM 5 C C5 GLC . . . D 3 37.225 34.195 42.327 1 89.28 ? C5 GLC 2 B 1 HETATM 6 C C6 GLC . . . D 3 36.165 33.514 41.423 1 107.63 ? C6 GLC 2 B 1 HETATM 7 O O1 GLC . . . D 3 40.178 33.606 43.643 1 77.11 ? O1 GLC 2 B 1 HETATM 8 O O2 GLC . . . D 3 40.626 36.136 43.573 1 68.42 ? O2 GLC 2 B 1 HETATM 9 O O3 GLC . . . D 3 38.342 37.744 42.763 1 81.23 ? O3 GLC 2 B 1 HETATM 10 O O4 GLC . . . D 3 36.062 36.303 42.114 1 75.7 ? O4 GLC 2 B 1 HETATM 11 O O5 GLC . . . D 3 38.468 33.569 42.078 1 86.1 ? O5 GLC 2 B 1 HETATM 12 O O6 GLC . . . D 3 35.984 32.207 41.89 1 106.04 ? O6 GLC 2 B 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 234 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 12 #