data_3ET7 # _model_server_result.job_id 2Ibesly1mJdNh8PwnzRvuw _model_server_result.datetime_utc '2025-07-30 16:11:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3et7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":999}' # _entry.id 3ET7 # _exptl.entry_id 3ET7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 530.522 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-{[4-{[2-(pyrrolidin-1-ylsulfonyl)benzyl]amino}-5-(trifluoromethyl)pyrimidin-2-yl]amino}-1,3-dihydro-2H-indol-2-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3ET7 _cell.length_a 106.824 _cell.length_b 106.824 _cell.length_c 75.185 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ET7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 4 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H21 F3 N6 O3 S' _chem_comp.formula_weight 530.522 _chem_comp.id 349 _chem_comp.mon_nstd_flag . _chem_comp.name 5-{[4-{[2-(pyrrolidin-1-ylsulfonyl)benzyl]amino}-5-(trifluoromethyl)pyrimidin-2-yl]amino}-1,3-dihydro-2H-indol-2-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O32 S30 349 doub 1 n n S30 O31 349 doub 2 n n S30 N33 349 sing 3 n n S30 C29 349 sing 4 n n N33 C34 349 sing 5 n n N33 C37 349 sing 6 n n C34 C35 349 sing 7 n n C35 C36 349 sing 8 n n C36 C37 349 sing 9 n n C29 C28 349 doub 10 n y C29 C24 349 sing 11 n y C28 C27 349 sing 12 n y C27 C26 349 doub 13 n y C26 C25 349 sing 14 n y C25 C24 349 doub 15 n y C24 C23 349 sing 16 n n C23 N22 349 sing 17 n n N22 C21 349 sing 18 n n C21 N20 349 doub 19 n y C21 C5 349 sing 20 n y N20 C8 349 sing 21 n y C8 N7 349 doub 22 n y C8 N9 349 sing 23 n n N7 C6 349 sing 24 n y C6 C5 349 doub 25 n y C5 C2 349 sing 26 n n C2 F4 349 sing 27 n n C2 F3 349 sing 28 n n C2 F1 349 sing 29 n n N9 C10 349 sing 30 n n C10 C11 349 sing 31 n n C10 C19 349 doub 32 n n C11 C12 349 doub 33 n n C12 C13 349 sing 34 n n C13 N14 349 doub 35 n n C13 C18 349 sing 36 n n N14 C15 349 sing 37 n n C18 C19 349 sing 38 n n C18 C17 349 doub 39 n n C17 C15 349 sing 40 n n C15 O16 349 doub 41 n n C34 H34 349 sing 42 n n C34 H34A 349 sing 43 n n C35 H35 349 sing 44 n n C35 H35A 349 sing 45 n n C36 H36 349 sing 46 n n C36 H36A 349 sing 47 n n C37 H37 349 sing 48 n n C37 H37A 349 sing 49 n n C28 H28 349 sing 50 n n C27 H27 349 sing 51 n n C26 H26 349 sing 52 n n C25 H25 349 sing 53 n n C23 H23 349 sing 54 n n C23 H23A 349 sing 55 n n N22 HN22 349 sing 56 n n C6 H6 349 sing 57 n n N9 HN9 349 sing 58 n n C11 H11 349 sing 59 n n C12 H12 349 sing 60 n n C19 H19 349 sing 61 n n C17 H17 349 sing 62 n n # _atom_sites.entry_id 3ET7 _atom_sites.fract_transf_matrix[1][1] 0.009361 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009361 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013301 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 349 A 1 999 999 349 349 . C 3 PO4 A 1 1001 1001 PO4 PO4 . D 4 HOH A 1 1002 1002 HOH HOH . D 4 HOH A 2 1003 1003 HOH HOH . D 4 HOH A 3 1004 1004 HOH HOH . D 4 HOH A 4 1005 1005 HOH HOH . D 4 HOH A 5 1006 1006 HOH HOH . D 4 HOH A 6 1007 1007 HOH HOH . D 4 HOH A 7 1008 1008 HOH HOH . D 4 HOH A 8 1009 1009 HOH HOH . D 4 HOH A 9 1010 1010 HOH HOH . D 4 HOH A 10 1011 1011 HOH HOH . D 4 HOH A 11 1012 1012 HOH HOH . D 4 HOH A 12 1013 1013 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O32 349 . . . B 2 21.583 66.103 21.878 1 60.01 ? O32 349 999 A 1 HETATM 2 S S30 349 . . . B 2 21.384 65.262 20.732 1 62.28 ? S30 349 999 A 1 HETATM 3 O O31 349 . . . B 2 20.837 65.576 19.462 1 59.81 ? O31 349 999 A 1 HETATM 4 N N33 349 . . . B 2 20.548 63.896 21.304 1 65.34 ? N33 349 999 A 1 HETATM 5 C C34 349 . . . B 2 20.527 63.399 22.722 1 66.5 ? C34 349 999 A 1 HETATM 6 C C35 349 . . . B 2 19.259 62.456 22.844 1 66.01 ? C35 349 999 A 1 HETATM 7 C C36 349 . . . B 2 19.059 61.904 21.412 1 63.71 ? C36 349 999 A 1 HETATM 8 C C37 349 . . . B 2 19.581 63.067 20.513 1 64.06 ? C37 349 999 A 1 HETATM 9 C C29 349 . . . B 2 23.016 64.664 20.424 1 53.82 ? C29 349 999 A 1 HETATM 10 C C28 349 . . . B 2 23.296 63.29 20.71 1 45.88 ? C28 349 999 A 1 HETATM 11 C C27 349 . . . B 2 24.563 62.819 20.502 1 38.12 ? C27 349 999 A 1 HETATM 12 C C26 349 . . . B 2 25.499 63.779 20.065 1 40.95 ? C26 349 999 A 1 HETATM 13 C C25 349 . . . B 2 25.263 65.128 19.79 1 37.37 ? C25 349 999 A 1 HETATM 14 C C24 349 . . . B 2 23.964 65.606 19.968 1 44.24 ? C24 349 999 A 1 HETATM 15 C C23 349 . . . B 2 23.577 67.058 19.732 1 34.41 ? C23 349 999 A 1 HETATM 16 N N22 349 . . . B 2 24.887 67.735 19.492 1 39.65 ? N22 349 999 A 1 HETATM 17 C C21 349 . . . B 2 25.306 68.177 18.234 1 35.24 ? C21 349 999 A 1 HETATM 18 N N20 349 . . . B 2 24.605 67.856 17.157 1 37.35 ? N20 349 999 A 1 HETATM 19 C C8 349 . . . B 2 25.044 68.307 15.978 1 37.19 ? C8 349 999 A 1 HETATM 20 N N7 349 . . . B 2 26.075 69.145 15.77 1 35.9 ? N7 349 999 A 1 HETATM 21 C C6 349 . . . B 2 26.832 69.48 16.827 1 31.64 ? C6 349 999 A 1 HETATM 22 C C5 349 . . . B 2 26.43 68.95 18.045 1 33.86 ? C5 349 999 A 1 HETATM 23 C C2 349 . . . B 2 27.214 69.264 19.241 1 41.37 ? C2 349 999 A 1 HETATM 24 F F4 349 . . . B 2 26.341 69.889 20.127 1 46.12 ? F4 349 999 A 1 HETATM 25 F F3 349 . . . B 2 27.671 68.124 19.925 1 43.53 ? F3 349 999 A 1 HETATM 26 F F1 349 . . . B 2 28.356 69.896 18.763 1 37.99 ? F1 349 999 A 1 HETATM 27 N N9 349 . . . B 2 24.23 67.969 14.963 1 39.83 ? N9 349 999 A 1 HETATM 28 C C10 349 . . . B 2 23.136 67.077 15.216 1 39.78 ? C10 349 999 A 1 HETATM 29 C C11 349 . . . B 2 23.075 66.397 16.379 1 33.41 ? C11 349 999 A 1 HETATM 30 C C12 349 . . . B 2 22.013 65.524 16.517 1 40.12 ? C12 349 999 A 1 HETATM 31 C C13 349 . . . B 2 20.994 65.296 15.641 1 36.82 ? C13 349 999 A 1 HETATM 32 N N14 349 . . . B 2 19.858 64.462 15.707 1 44.27 ? N14 349 999 A 1 HETATM 33 C C18 349 . . . B 2 21.075 65.985 14.442 1 39.94 ? C18 349 999 A 1 HETATM 34 C C19 349 . . . B 2 22.117 66.865 14.245 1 39.25 ? C19 349 999 A 1 HETATM 35 C C17 349 . . . B 2 19.884 65.581 13.562 1 42.7 ? C17 349 999 A 1 HETATM 36 C C15 349 . . . B 2 19.163 64.592 14.491 1 50.98 ? C15 349 999 A 1 HETATM 37 O O16 349 . . . B 2 18.141 64.021 14.12 1 58.4 ? O16 349 999 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 384 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 37 #